jdrudolph/goenrich issues and pull requests

#20 - Release 1.12

Pull Request - State: closed - Opened by jdrudolph over 4 years ago

#19 - Networkx 2.4 (October 2019) has moved the .node accessor to ._node / .nodes

Issue - State: closed - Opened by alexlenail over 4 years ago - 1 comment

#18 - Possibly unaccounted file version dependency in unittests?

Issue - State: closed - Opened by srcoulombe over 4 years ago - 1 comment

#17 - Example does not work

Issue - State: closed - Opened by radusuciu almost 5 years ago - 1 comment

#16 - Compatibility with `networkx` v2.4, changing every use of the `.node` method to `.nodes`.

Pull Request - State: closed - Opened by darachm about 5 years ago - 1 comment

#15 - Update for networkx 2.3 --> 2.4, minor safety fixes in obo.py

Pull Request - State: closed - Opened by srcoulombe about 5 years ago - 3 comments
Labels: enhancement

#14 - Incompatibility with networkx2.4

Issue - State: closed - Opened by srcoulombe about 5 years ago - 1 comment

#13 - Feature request

Issue - State: closed - Opened by iamjli over 6 years ago - 1 comment

#12 - Bonferroni correction actually makes results more significant

Issue - State: closed - Opened by josiahseaman over 6 years ago - 2 comments
Labels: bug

#11 - Implement GOntology class

Pull Request - State: closed - Opened by mikpom almost 7 years ago - 5 comments

#10 - Add 'is_a', 'part_of' attributes to edges

Issue - State: closed - Opened by mikpom about 7 years ago - 3 comments

#9 - BUG-FIX. Fix Hypergeometric distribution shape parameters.

Pull Request - State: closed - Opened by flashman about 7 years ago - 5 comments

#8 - Compatibility with Networkx 2.0

Pull Request - State: closed - Opened by mikpom over 7 years ago

#7 - Propagate direction

Issue - State: closed - Opened by mikpom over 7 years ago - 8 comments

#6 - fix bug in calculate_pvalues

Pull Request - State: closed - Opened by alexlenail over 7 years ago - 4 comments

#5 - update for new pandas version to avoid AttributeError.

Issue - State: closed - Opened by keoughkath over 7 years ago - 1 comment

#4 - Reading from file objects

Pull Request - State: closed - Opened by lukauskas over 8 years ago

#3 - Howdy from the scikit-bio team

Issue - State: closed - Opened by ebolyen over 9 years ago - 1 comment

#2 - Add a Gitter chat badge to README.md

Pull Request - State: closed - Opened by gitter-badger over 9 years ago

#1 - Example output

Issue - State: open - Opened by jdrudolph over 9 years ago - 5 comments

Ecosyste.ms: Issues

GitHub / jdrudolph/goenrich issues and pull requests