Ecosyste.ms: Issues

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GitHub / jbloomlab/dms_tools issues and pull requests

#18 - Bar plots misaligned

Issue - State: closed - Opened by Haddox about 7 years ago - 3 comments

#17 - Equations not rendered on some docs pages

Issue - State: closed - Opened by skhilton over 7 years ago - 1 comment

#16 - Add `median` option to `dms_merge`

Issue - State: closed - Opened by jbloom over 7 years ago - 3 comments

#15 - MCMC FAILED to converge after all attempts

Issue - State: closed - Opened by rraadd88 over 7 years ago - 3 comments

#14 - Remove suggestion to use `sudo` with `pip`

Issue - State: closed - Opened by altendky over 7 years ago - 5 comments

#13 - dms_barcodedsubamplicons without barcodes?

Issue - State: closed - Opened by kristinalweber almost 8 years ago - 3 comments

#12 - division by 0 in ReadDMSCounts

Issue - State: closed - Opened by orrzor about 8 years ago - 2 comments

#11 - move commonly used iPython notebooks to dms_tools

Issue - State: closed - Opened by jbloom about 8 years ago - 8 comments

#10 - Building consensus reads does not measure all pairwise distances

Issue - State: closed - Opened by Haddox about 8 years ago - 3 comments

#9 - add mincounts option to dms_diffselection

Issue - State: closed - Opened by jbloom about 8 years ago - 2 comments

#8 - Determining whether a mutation is beneficial, deleterious or neutral

Issue - State: closed - Opened by rraadd88 about 8 years ago - 4 comments

#7 - check counts files to reflect barcode counts, not read counts

Issue - State: closed - Opened by mbdoud over 8 years ago - 1 comment

#6 - add pseudocount specifically to sample with lower depth in dms_diffselection

Issue - State: closed - Opened by mbdoud over 8 years ago - 2 comments

#5 - conflicts in master

Issue - State: closed - Opened by jbloom over 8 years ago - 1 comment

#4 - making `dms_merge` handle counts

Issue - State: closed - Opened by jbloom over 8 years ago - 1 comment

#3 - adding dms_matchsubassembledbarcodes

Issue - State: closed - Opened by jbloom almost 9 years ago

#2 - ratio estimation

Issue - State: closed - Opened by jbloom almost 9 years ago - 3 comments

#1 - add details on round 2 primers in dms_subassemble documentation

Issue - State: closed - Opened by jbloom about 9 years ago