janelia-flyem/dvid issues and pull requests

#386 - Bump google.golang.org/grpc from 1.45.0 to 1.53.0

Pull Request - State: open - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#385 - Need POST .../set-nextlabel

Issue - State: open - Opened by stuarteberg over 1 year ago
Labels: enhancement

#384 - neuronjson performance for non-head versions

Issue - State: open - Opened by stuarteberg over 1 year ago

#383 - Allow security to limit API request access depending on domain

Issue - State: open - Opened by DocSavage over 1 year ago
Labels: enhancement

#382 - neuronjson: Auto-convert 'group' field into int

Issue - State: closed - Opened by stuarteberg over 1 year ago
Labels: urgent

#381 - Disable labelmap endpoint: /split

Issue - State: closed - Opened by stuarteberg over 1 year ago - 2 comments

#380 - /sparsevol args for minx,maxx, etc. don't work as expected

Issue - State: closed - Opened by stuarteberg over 1 year ago - 1 comment
Labels: urgent

#379 - Bump golang.org/x/crypto from 0.0.0-20220214200702-86341886e292 to 0.1.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#378 - Bump golang.org/x/net from 0.0.0-20220325170049-de3da57026de to 0.7.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#377 - Bump golang.org/x/sys from 0.0.0-20220310020820-b874c991c1a5 to 0.1.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#376 - Bump golang.org/x/text from 0.3.7 to 0.3.8

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#375 - labelmap.go: Fix a few small typos

Pull Request - State: closed - Opened by pgunn over 1 year ago

#374 - Determine if an issue with ngprecomputed on edge blocks still exists

Issue - State: open - Opened by DocSavage almost 2 years ago

#373 - Allow repo:branch placeholder syntax to omit repo

Issue - State: closed - Opened by stuarteberg almost 2 years ago

#372 - Help setting up DVID for neu3

Issue - State: closed - Opened by pgunn almost 2 years ago - 7 comments
Labels: question

#371 - max versions limited to ~256

Issue - State: closed - Opened by pgunn about 2 years ago - 2 comments

#370 - Sparsevol-coarse missing

Issue - State: closed - Opened by liammm-lza about 2 years ago - 11 comments
Labels: run issue

#369 - For tiny bodies, /sparsevol returns 404 at low resolution

Issue - State: closed - Opened by stuarteberg over 2 years ago - 4 comments
Labels: enhancement, urgent

#368 - unable to restart dvid (unable to initialize storage)

Issue - State: closed - Opened by FeifeiyuM over 2 years ago - 4 comments
Labels: run issue

#367 - fix edge filename computation

Pull Request - State: closed - Opened by pgunn over 2 years ago - 2 comments

#366 - preliminary s3 support (and precomputed doc)

Pull Request - State: closed - Opened by pgunn over 2 years ago

#365 - Add 'upstream' and 'downstream' options to labelsz

Issue - State: open - Opened by stuarteberg over 2 years ago - 3 comments
Labels: enhancement

#364 - Feature Request: per-repo backup

Issue - State: open - Opened by pgunn over 2 years ago
Labels: enhancement

#363 - ngprecomputed boundary chunk name computation is off

Issue - State: closed - Opened by pgunn over 2 years ago

#362 - Maximally permissive CORS by default

Issue - State: open - Opened by stuarteberg over 2 years ago - 1 comment

#361 - Mapping updates in response to certain mutations

Issue - State: closed - Opened by stuarteberg over 2 years ago - 3 comments
Labels: urgent

#360 - Explicit renumbering of body IDs

Issue - State: closed - Opened by stuarteberg almost 3 years ago - 1 comment
Labels: urgent

#359 - Endpoint to reload annotations for only a subset of labels

Issue - State: open - Opened by stuarteberg almost 3 years ago
Labels: enhancement

#358 - can not see web page

Issue - State: closed - Opened by jingpengw about 3 years ago - 2 comments

#357 - Mac builds are broken

Issue - State: closed - Opened by stuarteberg over 3 years ago - 2 comments
Labels: build issue

#356 - /keyvalues?json=true returns invalid json

Issue - State: closed - Opened by stuarteberg over 3 years ago - 1 comment
Labels: bug

#355 - Back-end for clio store body annotations

Issue - State: closed - Opened by stuarteberg over 3 years ago - 1 comment

#354 - After cleave, the new body should have a non-zero mutation ID

Issue - State: closed - Opened by stuarteberg over 3 years ago - 1 comment
Labels: bug

#353 - Confusing status code while using HEAD on keyvalue data

Issue - State: closed - Opened by tingzhao over 3 years ago

#352 - Update /maxlabel value during labelindex ingestion

Issue - State: closed - Opened by stuarteberg over 3 years ago

#351 - labelmap.go: Fix typo

Pull Request - State: closed - Opened by pgunn over 3 years ago

#350 - Adds Dockerfile to build dvid image

Pull Request - State: closed - Opened by neomorphic over 3 years ago

#349 - conda-recipe: Upgrade librdkafka and lz4-c

Pull Request - State: closed - Opened by stuarteberg about 4 years ago - 1 comment

#348 - modify blocks uint64 compression scheme to allow on-the-fly label mapping

Issue - State: open - Opened by DocSavage about 4 years ago
Labels: enhancement

#347 - GET /subvolblocks does not respect compression option

Issue - State: closed - Opened by stuarteberg over 4 years ago

#346 - gocloud.dev git repo

Issue - State: closed - Opened by stuarteberg over 4 years ago - 7 comments

#345 - cannot re-use instance name if it already exists on a different branch

Issue - State: open - Opened by stuarteberg over 4 years ago - 1 comment

#344 - labelmap does not allow manual extents update

Issue - State: closed - Opened by stuarteberg over 4 years ago - 1 comment
Labels: enhancement

#343 - Denormalizations for supervoxels

Issue - State: open - Opened by stuarteberg over 4 years ago
Labels: enhancement

#342 - Race condition in labelmap POST /blocks?downres=true

Issue - State: closed - Opened by stuarteberg over 4 years ago - 1 comment
Labels: documentation

#341 - Feature Request: Expose deletion endpoints for the brave

Issue - State: open - Opened by pgunn over 4 years ago - 5 comments
Labels: enhancement

#340 - annotation block size should be configurable

Issue - State: open - Opened by stuarteberg over 4 years ago

#339 - Weird issue where segmentation size isn't returning value

Issue - State: open - Opened by umayaml almost 5 years ago
Labels: run issue

#338 - Issuing DELETE and POST to DVID keyvalue not going through

Issue - State: closed - Opened by umayaml almost 5 years ago - 3 comments
Labels: bug

#337 - Add simple, optional authentication/authorization. Move badger support to v2.0.0.

Pull Request - State: closed - Opened by DocSavage almost 5 years ago

#336 - "Master" branch should, in the UI, indicate that Master is a conceit of the UI

Issue - State: open - Opened by pgunn almost 5 years ago

#335 - Add ability to modify Tags for an instance

Issue - State: closed - Opened by DocSavage almost 5 years ago
Labels: enhancement

#334 - Annotation kafka logging for mutations. All merges record a MutationID of 0

Issue - State: closed - Opened by umayaml almost 5 years ago - 1 comment
Labels: bug

#333 - Modify labelmap kafka log for mutations to segmentation to include voxel size

Issue - State: closed - Opened by umayaml almost 5 years ago - 2 comments
Labels: enhancement

#332 - Modify keyvalue kafka log entry to include keyvalue text/value being posted

Issue - State: open - Opened by umayaml almost 5 years ago
Labels: enhancement

#331 - repo deletion causes panic

Issue - State: closed - Opened by stuarteberg almost 5 years ago - 2 comments
Labels: bug

#324 - Handle the OPTIONS method properly from http requests

Issue - State: closed - Opened by tingzhao about 5 years ago - 3 comments

#323 - in-memory map should include "identity" entries

Issue - State: closed - Opened by stuarteberg about 5 years ago - 4 comments
Labels: enhancement, urgent

#320 - Start using go modules

Issue - State: open - Opened by stuarteberg over 5 years ago - 2 comments
Labels: enhancement

#319 - Expose toml contents and location via http

Issue - State: closed - Opened by stuarteberg over 5 years ago - 2 comments
Labels: enhancement

#318 - Proceed with new build parameters with eventual update of upstream packages

Pull Request - State: closed - Opened by DocSavage over 5 years ago

#316 - /supervoxel-splits response is missing some events

Issue - State: open - Opened by stuarteberg over 5 years ago - 3 comments
Labels: bug

#315 - /supervoxel-splits response includes duplicate entries

Issue - State: open - Opened by stuarteberg over 5 years ago
Labels: bug

#314 - labelmap: Add option to return /mappings in a binary format

Pull Request - State: closed - Opened by stuarteberg over 5 years ago - 1 comment

#312 - Simplify developer setup script

Pull Request - State: closed - Opened by stuarteberg over 5 years ago

#310 - Use new go-cgo package from conda-forge, support conda-4.6

Pull Request - State: closed - Opened by stuarteberg over 5 years ago

#308 - Log Annotation Element Sync changes in Kafka.

Issue - State: closed - Opened by umayaml over 5 years ago - 2 comments
Labels: enhancement

#307 - Need POST .../maxlabel

Issue - State: closed - Opened by stuarteberg over 5 years ago - 1 comment

#301 - labelmap extents are not written correctly on initial ingestion.

Issue - State: closed - Opened by stuarteberg almost 6 years ago
Labels: bug

#297 - /mappings endpoint should include 'retired' SV ids (mapped to 0)

Issue - State: closed - Opened by stuarteberg almost 6 years ago - 1 comment
Labels: enhancement, urgent

#291 - labelmap POST /blocks behavior w.r.t. the label index

Issue - State: open - Opened by stuarteberg almost 6 years ago
Labels: question

#289 - Split can leave size-0 supervoxels in the mapping

Issue - State: open - Opened by stuarteberg about 6 years ago - 5 comments
Labels: bug, urgent, unbounded time

#288 - Cases of split supervoxels splits which were not logged to kafka

Issue - State: open - Opened by stuarteberg about 6 years ago - 2 comments

#286 - add body-specific mutation id to labelmap

Issue - State: closed - Opened by DocSavage about 6 years ago - 3 comments
Labels: enhancement

#284 - maxlabel endpoint does not work for all nodes

Issue - State: open - Opened by stuarteberg about 6 years ago - 1 comment
Labels: low priority

#280 - Webhook config

Pull Request - State: closed - Opened by olbris about 6 years ago

#270 - Can't update data instance /info

Issue - State: open - Opened by stuarteberg about 6 years ago - 1 comment

#269 - Small patch to gbucket

Pull Request - State: closed - Opened by stuarteberg about 6 years ago

#267 - Kafka/mutations message enhancements

Issue - State: closed - Opened by stuarteberg over 6 years ago - 7 comments
Labels: enhancement

#262 - API for all supervoxel sizes within a body

Issue - State: closed - Opened by stuarteberg over 6 years ago - 2 comments
Labels: enhancement, urgent

#235 - Add user id and timestamp to label indices, mutation logs

Issue - State: closed - Opened by DocSavage about 7 years ago - 2 comments
Labels: enhancement

#210 - "versioned" parameter is a string, not boolean, when creating data instance

Issue - State: closed - Opened by grisaitis over 7 years ago

#204 - Misalignment in googlevoxels returned image with local grayscale data

Issue - State: open - Opened by DocSavage over 7 years ago - 1 comment
Labels: bug, low priority

#203 - Unexpected error message from googlevoxels GET API

Issue - State: open - Opened by tingzhao over 7 years ago
Labels: bug, low priority

#168 - dvid push with default transmit=all doesn't work

Issue - State: open - Opened by DocSavage about 8 years ago
Labels: bug, low priority

#152 - On experimental "push" with delimiting ROI, fix metadata

Issue - State: open - Opened by DocSavage over 8 years ago
Labels: bug, low priority

#148 - Improve versioned/unversioned handling

Issue - State: open - Opened by DocSavage over 8 years ago
Labels: enhancement

#138 - Refactor data instance RWLock for consideration of single vs clustered DVID use, etc.

Issue - State: open - Opened by DocSavage over 8 years ago
Labels: enhancement

#137 - allow 3d request for labelblk that just passes compressed blocks

Issue - State: closed - Opened by stephenplaza over 8 years ago - 1 comment
Labels: enhancement, wontfix

#125 - Adjust metadata for grayscale and label POSTs

Issue - State: open - Opened by stephenplaza over 8 years ago - 1 comment
Labels: enhancement

#123 - Free types for values in "Prop" property of annotation data

Issue - State: open - Opened by tingzhao over 8 years ago
Labels: enhancement

#99 - Profile DVID code and start optimization on important use cases

Issue - State: closed - Opened by DocSavage about 9 years ago - 3 comments
Labels: enhancement, question

#95 - In case of conflicted labelblk GET after conflict-free merge, should return error

Issue - State: closed - Opened by DocSavage about 9 years ago
Labels: wontfix

#82 - Add graceful restart with optional restart on idle

Issue - State: open - Opened by DocSavage over 9 years ago
Labels: enhancement

#80 - Deletion or 'archiving' of Child Node

Issue - State: open - Opened by stephenplaza over 9 years ago
Labels: enhancement

#76 - Add body query to labelblk

Issue - State: closed - Opened by stephenplaza over 9 years ago - 1 comment
Labels: enhancement, wontfix

#75 - DVID HEAD support

Issue - State: closed - Opened by tingzhao over 9 years ago - 6 comments
Labels: enhancement

#57 - Termination of client during labelgraph GET can result in errors

Issue - State: closed - Opened by DocSavage over 9 years ago
Labels: wontfix

#56 - Investigate crash after several large image requests (100+k x 100+k pixels)

Issue - State: open - Opened by DocSavage over 9 years ago
Labels: bug, low priority

#36 - Extend sparse volumes to be multi-scale.

Issue - State: closed - Opened by DocSavage almost 10 years ago - 1 comment
Labels: enhancement

GitHub / janelia-flyem/dvid issues and pull requests