Ecosyste.ms: Issues

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GitHub / jakeret/tf_unet issues and pull requests

#94 - Questions of a noob

Issue - State: open - Opened by LauraLaureus about 7 years ago - 5 comments
Labels: question

#93 - Padding Options

Issue - State: open - Opened by weezhao96 about 7 years ago - 3 comments
Labels: enhancement

#92 - Issues while loading the image dataset.

Issue - State: closed - Opened by reshu-b7 about 7 years ago

#91 - starting U-net

Issue - State: closed - Opened by Fab1900 about 7 years ago - 33 comments
Labels: question

#90 - Question: Demo toy problem

Issue - State: closed - Opened by CataRay about 7 years ago

#89 - the crop_to_shape(data, shape) function not work right

Issue - State: open - Opened by LilianYe about 7 years ago - 3 comments
Labels: enhancement

#88 - fixed minibatch loss after trainning and question about prediction

Issue - State: closed - Opened by MikeXlYang about 7 years ago - 2 comments

#87 - ImageDataProvider: shuffle images for randomization

Pull Request - State: closed - Opened by FiLeonard about 7 years ago - 1 comment

#86 - Predicted image size doesn't match the input image size

Issue - State: closed - Opened by mirth about 7 years ago - 1 comment
Labels: duplicate, question

#85 - wrong shape, cannot get it to work on my data + minibatch loss fixed

Issue - State: closed - Opened by GlastonburyC over 7 years ago - 8 comments

#84 - Question about using own dataset

Issue - State: closed - Opened by moudsarewju over 7 years ago - 1 comment
Labels: question

#83 - Predicting test images

Issue - State: closed - Opened by diamondspark over 7 years ago

#82 - conv3d missing

Issue - State: closed - Opened by 541435721 over 7 years ago - 1 comment

#81 - Multi Class Segmentation

Issue - State: closed - Opened by nargeshn over 7 years ago - 14 comments
Labels: question

#80 - Loading a saved model?

Issue - State: closed - Opened by carsnwd over 7 years ago - 1 comment
Labels: question

#79 - Segmentation for classes more than 2

Issue - State: closed - Opened by dakshvar22 over 7 years ago - 7 comments

#78 - binary classification task problem

Issue - State: closed - Opened by 541435721 over 7 years ago - 5 comments

#77 - what's the command seek

Issue - State: closed - Opened by zhcf over 7 years ago - 8 comments

#76 - Question about training iterations and epoch

Issue - State: closed - Opened by SmilingFrank over 7 years ago - 2 comments

#74 - dice coefficient nan

Issue - State: open - Opened by ysyyork over 7 years ago - 1 comment
Labels: bug, duplicate, question

#73 - Ability to retrieve individual segments from the predicted image segmentation

Issue - State: closed - Opened by inzamamul over 7 years ago - 3 comments
Labels: question

#72 - multiclass mask

Issue - State: closed - Opened by tottitt over 7 years ago - 1 comment
Labels: question

#71 - Typo on usage.rst - fixed version in body

Issue - State: closed - Opened by jeffreyyun over 7 years ago - 2 comments

#70 - Pixels close to edges

Issue - State: closed - Opened by vabrishami over 7 years ago - 7 comments
Labels: enhancement, question

#69 - Cannot import tf_unet

Issue - State: closed - Opened by Enigma-li over 7 years ago - 2 comments

#68 - Missing conv3d and deconv3d functions

Issue - State: closed - Opened by rceballos98 over 7 years ago

#67 - softmax_cross_entropy_with_logits requires named arguments

Pull Request - State: closed - Opened by AlessioM over 7 years ago - 1 comment

#66 - Segmenting RGB Images?

Issue - State: closed - Opened by carsnwd over 7 years ago - 4 comments

#65 - Error in combine_img_prediction

Issue - State: closed - Opened by stefat77 over 7 years ago - 14 comments
Labels: bug

#64 - Conceptual Question

Issue - State: closed - Opened by YadavKapil over 7 years ago - 1 comment
Labels: question

#63 - Why are there two weight initilizers?

Issue - State: open - Opened by wagenrace over 7 years ago - 1 comment
Labels: enhancement

#62 - Optimization of last convolutional layer

Issue - State: open - Opened by ameliajimenez over 7 years ago - 1 comment
Labels: bug

#61 - batch_size can't be bigger than 1?

Issue - State: closed - Opened by PiaoLiangHXD over 7 years ago - 2 comments

#60 - modified dice loss

Pull Request - State: closed - Opened by haichaoyu over 7 years ago - 2 comments

#59 - Gradients are zero after model is restored

Issue - State: open - Opened by ameliajimenez over 7 years ago - 3 comments
Labels: question

#58 - Questions about UNet architecture and Dice loss

Issue - State: open - Opened by haichaoyu over 7 years ago - 3 comments

#57 - usage help, training files

Issue - State: closed - Opened by gopi77 over 7 years ago - 4 comments

#56 - Segmentation with small dataset

Issue - State: closed - Opened by giovanni-turra over 7 years ago - 1 comment

#55 - Gap between theoric and output image size

Pull Request - State: open - Opened by jordangierschendorf over 7 years ago - 3 comments

#54 - OutputImageSize

Pull Request - State: closed - Opened by jordangierschendorf over 7 years ago - 2 comments

#53 - is there any setting should be considered in using this code?

Issue - State: closed - Opened by bhralzz over 7 years ago - 10 comments

#52 - tensorboard using

Issue - State: closed - Opened by bhralzz over 7 years ago - 3 comments

#51 - Change 'dice_coefficient' to calculate Dice score rather than pixel accuracy

Pull Request - State: open - Opened by ethanbb over 7 years ago - 13 comments

#50 - NiiImageDataProvider: Generic data provider for nifti images.

Issue - State: closed - Opened by JunMa11 over 7 years ago - 1 comment

#49 - how to save, restore and use the trained model?

Issue - State: closed - Opened by bhralzz over 7 years ago - 2 comments

#48 - Add support for Keras ImageDataGenerator

Issue - State: open - Opened by jakeret over 7 years ago
Labels: enhancement, help wanted

#47 - Tensorflow Unet training error with TensorFlow 1.1.0

Issue - State: closed - Opened by panovr over 7 years ago - 2 comments
Labels: duplicate

#46 - How to train the Unet for three-dimensional matrices （custom dataset）

Issue - State: closed - Opened by JunMa11 over 7 years ago - 4 comments
Labels: enhancement

#45 - Keras 2

Issue - State: closed - Opened by hadim over 7 years ago - 1 comment

#44 - unet.Unet class

Issue - State: closed - Opened by roestigraben over 7 years ago - 3 comments

#43 - Prediction is shifted

Issue - State: closed - Opened by chinnikrishna55 over 7 years ago - 2 comments

#42 - write computation graph to file on training

Pull Request - State: closed - Opened by agrafix over 7 years ago - 2 comments

#41 - prediction.shape different from input.shape

Issue - State: closed - Opened by AlibekJ over 7 years ago - 3 comments

#40 - regularization on biases

Issue - State: open - Opened by GuangQin1995 over 7 years ago - 3 comments
Labels: help wanted

#39 - size of output images don't match with original paper

Issue - State: open - Opened by jordangierschendorf over 7 years ago - 7 comments
Labels: bug, help wanted

#37 - Training loss doesn't converge for custom dataset

Issue - State: open - Opened by panovr over 7 years ago - 40 comments
Labels: question

#36 - Issue with groundtruth shape?

Issue - State: closed - Opened by jeanpat over 7 years ago - 4 comments
Labels: question

#35 - How to load custom dataset for training and validating?

Issue - State: closed - Opened by panovr over 7 years ago - 4 comments

#34 - Data (dir+files) erased completely

Issue - State: closed - Opened by jeanpat over 7 years ago - 2 comments

#33 - Fails to import image_util

Issue - State: closed - Opened by jeanpat over 7 years ago - 1 comment

#32 - Failed to run the demo_toy_problem with tensorflow 1.0.1

Issue - State: closed - Opened by jeanpat over 7 years ago - 2 comments

#31 - Weighted Cross Entropy not working on high imbalance data

Issue - State: closed - Opened by brcsomnath over 7 years ago - 1 comment

#30 - Tf100

Pull Request - State: closed - Opened by jakeret over 7 years ago

#29 - Ameya005 master

Pull Request - State: closed - Opened by jakeret over 7 years ago

#28 - Error when training with Dice Coefficient

Issue - State: open - Opened by bslin over 7 years ago - 9 comments

#27 - fixed dice coeff and replaced logits with prediction

Pull Request - State: closed - Opened by jakeret over 7 years ago

#26 - Compatibility with Tensorflow 1.0

Issue - State: closed - Opened by kbl4ew over 7 years ago - 2 comments
Labels: help wanted, question

#25 - Dice coefficient update

Pull Request - State: closed - Opened by bdnorman over 7 years ago - 3 comments

#24 - tf.nn.conv2d_transpose?

Issue - State: closed - Opened by engineeringmath over 7 years ago - 3 comments

#23 - Model saving not working

Issue - State: closed - Opened by ameya005 over 7 years ago - 2 comments

#22 - Typeerror in demo

Issue - State: closed - Opened by hftsai over 7 years ago - 2 comments

#21 - Error with example code

Issue - State: closed - Opened by asaydin over 7 years ago - 2 comments

#20 - About dice loss

Issue - State: closed - Opened by sagarhukkire over 7 years ago - 6 comments

#19 - Compatibility issues with Tensorflow 1.0.0

Pull Request - State: closed - Opened by ameya005 over 7 years ago - 2 comments

#18 - Weighted Cross Entropy is wrong

Issue - State: closed - Opened by kiranvaidhya over 7 years ago - 1 comment

#17 - Multi-GPU training

Issue - State: closed - Opened by kiranvaidhya almost 8 years ago - 1 comment

#16 - Fixed dice loss to use probabilities, not logits.

Pull Request - State: closed - Opened by Zach-ER almost 8 years ago - 2 comments

#15 - Dice loss operating on logits rather than predictions

Issue - State: closed - Opened by Zach-ER almost 8 years ago - 4 comments

#14 - Flexible loss

Pull Request - State: closed - Opened by jakeret almost 8 years ago

#13 - Fix off-by-one error in BaseDataProvider

Pull Request - State: closed - Opened by nicolov almost 8 years ago - 1 comment

#12 - Tf012

Pull Request - State: closed - Opened by jakeret almost 8 years ago

#11 - Felix gruen fix skip connections

Pull Request - State: closed - Opened by jakeret almost 8 years ago

#10 - Fixed weighted loss

Pull Request - State: closed - Opened by FelixGruen almost 8 years ago - 1 comment

#9 - Fixed backpropagation through skip connections

Pull Request - State: closed - Opened by FelixGruen almost 8 years ago

#8 - Weights before softmax error in the weighted loss function

Issue - State: closed - Opened by FelixGruen almost 8 years ago - 11 comments

#7 - No error backpropagation through skip connections

Issue - State: closed - Opened by FelixGruen almost 8 years ago - 5 comments

#6 - Error with using a custom dataset and image_util.ImageDataProvider()

Issue - State: open - Opened by JackBurdick almost 8 years ago - 13 comments
Labels: bug

#5 - Format of input?

Issue - State: closed - Opened by sansinghsanjay almost 8 years ago - 4 comments

#4 - Several observations during the empirical study

Issue - State: closed - Opened by surfreta about 8 years ago - 2 comments

#3 - regarding the usage of gradients and self.net.gradients_nodes

Issue - State: closed - Opened by surfreta about 8 years ago - 6 comments

#1 - the error messages of running demo_toy_problem.ipynb

Issue - State: closed - Opened by wenouyang about 8 years ago - 5 comments