iric-soft/km issues and pull requests

#25 - Better explain errors related to fasta parsing

Issue - State: open - Opened by feghalya over 1 year ago

#24 - km occur error in my pipeline

Issue - State: closed - Opened by Zhengfy1022 over 1 year ago - 1 comment

#23 - Specify versions for compiler and python in easy_install.sh

Issue - State: open - Opened by james-vincent over 1 year ago - 1 comment

#22 - Implement many reference to many alternative functionality

Pull Request - State: open - Opened by feghalya almost 2 years ago

#21 - Quantification

Pull Request - State: closed - Opened by feghalya almost 2 years ago

#20 - How to deal with "Mutation overlaps 2 exons or more, VCF output is disabled"

Issue - State: open - Opened by BoudSTER about 2 years ago - 9 comments
Labels: enhancement, question

#19 - VCF output not conventional ?

Issue - State: closed - Opened by BoudSTER about 2 years ago - 6 comments
Labels: bug, enhancement

#18 - km_find_report -> drop some variants

Issue - State: closed - Opened by BoudSTER about 2 years ago - 2 comments
Labels: question

#17 - how can i get the rVAF when "Abnormal" or "Normal"column output is 0?

Issue - State: open - Opened by lunawjy over 2 years ago - 1 comment
Labels: question

#16 - Dev

Pull Request - State: closed - Opened by feghalya almost 3 years ago

#15 - Rvaf

Pull Request - State: closed - Opened by ericloud almost 4 years ago

#14 - Codecov

Pull Request - State: closed - Opened by ericloud almost 4 years ago

#13 - Is ratio really computed as variant vs WT?

Issue - State: closed - Opened by mikael-s about 4 years ago - 2 comments
Labels: enhancement

#12 - add graphic option

Pull Request - State: closed - Opened by ericloud over 4 years ago

#11 - Inconsistent annotation of FLT3-ITD annotation (alignment-based method vs. km)

Issue - State: closed - Opened by Miachol over 4 years ago - 3 comments

#10 - Successful migration to python3 (tests pass)

Pull Request - State: closed - Opened by feghalya over 4 years ago

#9 - Using km on non-human samples

Issue - State: closed - Opened by benkraj over 4 years ago - 2 comments

#8 - difficulty installing with easy_install.sh

Issue - State: closed - Opened by bibbers93 almost 5 years ago - 6 comments
Labels: bug

#7 - VCF output

Pull Request - State: closed - Opened by feghalya over 5 years ago - 1 comment

#6 - Output in standard VCF format

Issue - State: closed - Opened by annaquaglieri16 over 5 years ago - 3 comments

#5 - km does not report complex indels found by VarDict

Issue - State: closed - Opened by annaquaglieri16 over 5 years ago - 7 comments
Labels: good first issue, question

#4 - km is stuck at one target sequence

Issue - State: closed - Opened by KoalaQin over 5 years ago - 5 comments
Labels: question

#3 - Is it normal that km is slow?

Issue - State: closed - Opened by KoalaQin over 5 years ago - 6 comments
Labels: good first issue, question

#2 - Dev

Pull Request - State: closed - Opened by ericloud about 6 years ago - 1 comment

#1 - Dev

Pull Request - State: closed - Opened by ericloud about 6 years ago

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