iobis/obis-qc issues and pull requests

#40 - Ensure that matching against OBIS taxa works with author in scientificName

Issue - State: open - Opened by pieterprovoost over 1 year ago
Labels: bug, taxonomy

#39 - Ensure that annotated list matching works with author in scientificName

Issue - State: open - Opened by pieterprovoost over 1 year ago
Labels: bug, taxonomy

#38 - 2021-10-06T24:30-04:00 not flagged as invalid

Issue - State: open - Opened by pieterprovoost over 1 year ago
Labels: bug, time

#37 - basisOfRecord does not include MaterialCitation?

Issue - State: closed - Opened by ymgan over 1 year ago - 1 comment

#36 - coordinateUncertaintyInMeters valid range should be >0

Issue - State: closed - Opened by ymgan over 1 year ago - 1 comment

#35 - New flags related to interpretation of scientificNameID

Issue - State: open - Opened by pieterprovoost over 1 year ago
Labels: taxonomy

#34 - taxon checks

Issue - State: open - Opened by ymgan over 1 year ago
Labels: taxonomy

#33 - Handle Homo sapiens

Issue - State: closed - Opened by pieterprovoost over 1 year ago - 3 comments
Labels: bug

#32 - Fetch annotated names from new API endpoint

Issue - State: open - Opened by pieterprovoost almost 2 years ago - 1 comment
Labels: taxonomy

#31 - Taxon matching fails on assert (len(allmatches) == len(names))

Issue - State: closed - Opened by pieterprovoost almost 2 years ago - 3 comments
Labels: bug, taxonomy

#30 - document flags for taxonomy

Issue - State: open - Opened by ymgan almost 2 years ago
Labels: taxonomy

#29 - Drop records if aphia record is deleted with no alternative

Issue - State: open - Opened by pieterprovoost almost 2 years ago - 5 comments
Labels: bug, taxonomy

#28 - WoRMS NCBI mapping regression

Issue - State: closed - Opened by pieterprovoost almost 2 years ago - 2 comments
Labels: bug

#27 - Update README.md

Pull Request - State: closed - Opened by ymgan almost 2 years ago - 1 comment

#26 - on_land checks

Issue - State: open - Opened by ymgan almost 2 years ago - 1 comment

#25 - decimalLatitude, decimalLongitude, coordinates checks

Issue - State: open - Opened by ymgan almost 2 years ago

#24 - eventDate, year, month, day checks

Issue - State: open - Opened by ymgan almost 2 years ago - 6 comments

#23 - occurrenceStatus, individualCount checks

Issue - State: open - Opened by ymgan almost 2 years ago - 1 comment

#22 - depth checks

Issue - State: open - Opened by ymgan almost 2 years ago - 6 comments

#21 - Merge master into refactoring

Pull Request - State: closed - Opened by pieterprovoost about 2 years ago

#20 - do not assign environmental values for large coordinateUncertaintyInMeters

Issue - State: open - Opened by pieterprovoost over 3 years ago
Labels: location

#19 - Remove requirement for id field

Pull Request - State: closed - Opened by pieterprovoost over 3 years ago

#18 - accepted aphia records lacking rank and other fields

Issue - State: open - Opened by pieterprovoost about 4 years ago
Labels: bug, taxonomy

#17 - DEPTH_OUT_OF_RANGE should not be set for invalid depths

Issue - State: closed - Opened by pieterprovoost about 4 years ago
Labels: bug, location

#16 - are we catching end time before start time errors?

Issue - State: open - Opened by pieterprovoost over 4 years ago
Labels: time

#15 - reimplement outlier analysis

Issue - State: open - Opened by pieterprovoost over 4 years ago
Labels: location

#14 - relax depth check

Issue - State: open - Opened by pieterprovoost over 4 years ago - 1 comment
Labels: location

#13 - flags table in README not up to date

Issue - State: open - Opened by pieterprovoost over 4 years ago
Labels: documentation

#12 - handle Aphia status quarantined

Issue - State: closed - Opened by pieterprovoost over 4 years ago
Labels: taxonomy

#11 - handle Aphia status deleted

Issue - State: closed - Opened by pieterprovoost over 4 years ago
Labels: taxonomy

#10 - handle WoRMS URLs in scientificNameID

Issue - State: closed - Opened by pieterprovoost over 4 years ago
Labels: taxonomy

#9 - Handle ITIS TSN and NCBI ID if in WoRMS

Issue - State: open - Opened by pieterprovoost over 4 years ago
Labels: taxonomy

#8 - include environment flags from unaccepted name

Issue - State: open - Opened by pieterprovoost over 4 years ago
Labels: taxonomy

#7 - use IRMNG for better detection of terrestrial records

Issue - State: open - Opened by pieterprovoost over 4 years ago
Labels: taxonomy

#6 - document WoRMS annotations

Issue - State: open - Opened by pieterprovoost over 4 years ago
Labels: taxonomy

#5 - taxonomy tests fail under Python 3.5 due to dict order

Issue - State: closed - Opened by pieterprovoost over 4 years ago
Labels: bug, wontfix

#4 - Vocab checks

Issue - State: open - Opened by skybristol almost 5 years ago

#3 - handle Aphia status quarantined

Issue - State: open - Opened by pieterprovoost almost 5 years ago
Labels: bug

#2 - integrate WoRMS annotated names list

Issue - State: closed - Opened by pieterprovoost almost 5 years ago - 1 comment
Labels: taxonomy, feature

#1 - plugin for local taxonomic matching

Issue - State: closed - Opened by pieterprovoost almost 5 years ago
Labels: taxonomy, feature

GitHub / iobis/obis-qc issues and pull requests