int-brain-lab/ONE issues and pull requests

#166 - str.lower -> str.casefold; support for plural acronyms (issue #80)

Pull Request - State: closed - Opened by k1o0 14 days ago

#165 - Remove deprecated

Pull Request - State: closed - Opened by k1o0 14 days ago

#164 - Improve setup

Pull Request - State: closed - Opened by k1o0 15 days ago

#163 - Low mem cache

Pull Request - State: closed - Opened by k1o0 15 days ago

#162 - ALFPath class

Pull Request - State: closed - Opened by k1o0 16 days ago

#161 - Updated setup function to reset parameters and updated the FAQs.

Pull Request - State: closed - Opened by rai-pranav 17 days ago - 3 comments

#160 - Error downloading from FlatIron with UUIDs in filenames

Issue - State: closed - Opened by k1o0 19 days ago
Labels: bug

#159 - Improve FAQ documentation

Issue - State: closed - Opened by k1o0 19 days ago
Labels: documentation, enhancement, good first issue

#158 - v2.11.1

Pull Request - State: closed - Opened by k1o0 19 days ago

#158 - v2.11.1

Pull Request - State: closed - Opened by k1o0 19 days ago

#157 - use pyproject.toml

Pull Request - State: closed - Opened by bimac 20 days ago

#157 - use pyproject.toml

Pull Request - State: closed - Opened by bimac 20 days ago

#156 - keep_eid_index ignored in OneAlyx.list_datasets

Issue - State: closed - Opened by k1o0 21 days ago
Labels: bug

#156 - keep_eid_index ignored in OneAlyx.list_datasets

Issue - State: closed - Opened by k1o0 21 days ago
Labels: bug

#155 - Reset params function

Issue - State: closed - Opened by k1o0 21 days ago
Labels: enhancement

#155 - Reset params function

Issue - State: open - Opened by k1o0 21 days ago
Labels: enhancement

#154 - Strict cache table dtypes & pandas future warnings

Issue - State: closed - Opened by k1o0 26 days ago

#153 - Update insertions cache with search_insertions

Issue - State: open - Opened by k1o0 26 days ago
Labels: enhancement

#153 - Update insertions cache with search_insertions

Issue - State: open - Opened by k1o0 26 days ago
Labels: enhancement

#152 - Refactor ONE

Issue - State: closed - Opened by k1o0 26 days ago
Labels: enhancement

#151 - Can't instantiate One without default client

Issue - State: closed - Opened by k1o0 26 days ago
Labels: bug

#150 - v2.11.0

Pull Request - State: closed - Opened by k1o0 26 days ago

#150 - v2.11.0

Pull Request - State: closed - Opened by k1o0 26 days ago

#149 - ALFPath objects

Issue - State: open - Opened by k1o0 27 days ago
Labels: enhancement

#149 - ALFPath objects

Issue - State: open - Opened by k1o0 27 days ago
Labels: enhancement

#148 - UUID objects in ONE

Issue - State: open - Opened by k1o0 27 days ago
Labels: enhancement

#148 - UUID objects in ONE

Issue - State: open - Opened by k1o0 27 days ago
Labels: enhancement

#147 - DEPRECATION: Legacy editable install of ONE-api

Issue - State: closed - Opened by k1o0 about 1 month ago - 1 comment

#146 - v2.10.1

Pull Request - State: closed - Opened by k1o0 about 1 month ago

#145 - Warn when users input quotes during setup

Issue - State: closed - Opened by k1o0 about 1 month ago
Labels: enhancement, good first issue

#144 - Add something to tqdm indicating source

Issue - State: closed - Opened by k1o0 about 1 month ago

#143 - Refactor function locations

Pull Request - State: closed - Opened by k1o0 about 1 month ago

#142 - Resolves #141

Pull Request - State: closed - Opened by k1o0 about 2 months ago

#141 - Paginated response populate is incorrect when indexing from end

Issue - State: closed - Opened by k1o0 about 2 months ago
Labels: bug

#140 - Slow instantiation of ONE

Issue - State: open - Opened by k1o0 about 2 months ago

#139 - Cache tables re-downloaded every time ONE is instantiated

Issue - State: closed - Opened by k1o0 about 2 months ago - 1 comment
Labels: invalid

#138 - Remote database querying by default

Pull Request - State: closed - Opened by k1o0 about 2 months ago

#137 - Resolves #135

Pull Request - State: closed - Opened by k1o0 about 2 months ago

#136 - Resolves issue #134

Pull Request - State: closed - Opened by k1o0 about 2 months ago

#135 - Authentication errors in silent mode confuse users

Issue - State: closed - Opened by k1o0 about 2 months ago
Labels: bug, enhancement

#134 - Drop session_path column from datasets cache table

Issue - State: closed - Opened by k1o0 about 2 months ago

#133 - alyx authentication problem appearing after successful authentication

Issue - State: closed - Opened by grg2rsr about 2 months ago

#132 - V2.10.0

Pull Request - State: closed - Opened by k1o0 2 months ago - 2 comments

#131 - ALFMultipleRevisionsFound raised when revision_last_before provided

Issue - State: closed - Opened by k1o0 2 months ago
Labels: bug

#130 - Filename wildcards can capture collections in filter_datasets

Issue - State: closed - Opened by k1o0 2 months ago
Labels: bug

#129 - load datasets with mixed revisions / defaults

Pull Request - State: closed - Opened by oliche 2 months ago

#128 - 2.9.1

Pull Request - State: closed - Opened by k1o0 2 months ago

#127 - account for public being in rel_path

Pull Request - State: closed - Opened by mayofaulkner 2 months ago

#126 - alfio Find variants reports non ambiguous datasets as ambiguous and raises

Issue - State: closed - Opened by oliche 3 months ago - 1 comment
Labels: invalid

#125 - find_variants and without_revision alf functions

Pull Request - State: closed - Opened by k1o0 4 months ago

#124 - Add check to see if dtype has a "shape" when checking object shapes

Pull Request - State: closed - Opened by chris-langfield 4 months ago - 1 comment

#123 - load_datasets fails when passed paths containing revisions

Issue - State: closed - Opened by k1o0 5 months ago - 1 comment

#122 - Is there an issue with ONE.download threads and the Jupyter notebook extension ?

Issue - State: closed - Opened by oliche 6 months ago - 1 comment

#121 - Resolves #120

Pull Request - State: closed - Opened by k1o0 8 months ago

#120 - Support npz loading in ONE

Issue - State: closed - Opened by k1o0 8 months ago

#119 - account for response not being a list

Pull Request - State: closed - Opened by mayofaulkner 8 months ago

#118 - Protected view

Pull Request - State: closed - Opened by mayofaulkner 8 months ago

#117 - V2.7.0

Pull Request - State: closed - Opened by k1o0 8 months ago

#116 - method to check whether datasets are protected

Pull Request - State: closed - Opened by mayofaulkner 8 months ago

#115 - Minor fixes

Pull Request - State: open - Opened by k1o0 10 months ago

#115 - Minor fixes

Pull Request - State: closed - Opened by k1o0 10 months ago

#114 - Prepare ONE for pandas 3.0

Issue - State: closed - Opened by k1o0 10 months ago - 3 comments
Labels: enhancement

#113 - ONE pypi workflow

Issue - State: closed - Opened by k1o0 10 months ago
Labels: documentation, enhancement

#112 - hotfix 2.5.5 resolves #111

Pull Request - State: closed - Opened by k1o0 10 months ago

#111 - List datasets in remote mode returns frame with multi-index

Issue - State: closed - Opened by k1o0 11 months ago
Labels: bug

#110 - fixes #109

Pull Request - State: closed - Opened by k1o0 11 months ago

#109 - Updating cache from remote records fails when empty frame

Issue - State: closed - Opened by k1o0 11 months ago
Labels: bug

#108 - Support dataset-level QC filter

Issue - State: closed - Opened by k1o0 11 months ago

#107 - support non-zero-padded sequence paths in ConvertersMixin.path2ref

Pull Request - State: closed - Opened by k1o0 11 months ago

#106 - Olive

Pull Request - State: closed - Opened by oliche 11 months ago - 1 comment

#105 - fix list_aggregates to work for public FI file records

Pull Request - State: closed - Opened by juhuntenburg 11 months ago - 2 comments

#104 - fix aws download bug

Pull Request - State: closed - Opened by oliche 11 months ago

#103 - Wrong relative path for aggregate datasets

Issue - State: closed - Opened by juhuntenburg 11 months ago - 3 comments

#102 - Can't import spikeglx module for python, nor does it seem available. Can't work with the LFP consequently.

Issue - State: closed - Opened by AngCamp 12 months ago - 1 comment

#101 - Do general users have access to the alyx REST Querries? Where are the list of available terms in each search type?

Issue - State: closed - Opened by AngCamp 12 months ago - 2 comments
Labels: question

#100 - UUID filenames

Pull Request - State: closed - Opened by k1o0 about 1 year ago

#99 - Provide an option to return a local file without computing md5 sum

Issue - State: closed - Opened by oliche about 1 year ago - 4 comments
Labels: enhancement

#98 - V2.4.0

Pull Request - State: closed - Opened by k1o0 about 1 year ago

#97 - replace print statement by logging statement when finding local globu…

Pull Request - State: closed - Opened by oliche about 1 year ago - 2 comments