Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / insitro/redun issues and pull requests
#102 - fix links between doc pages
Pull Request -
State: closed - Opened by nkeriks 25 days ago
- 1 comment
#101 - make REDUN_PROG configurable
Issue -
State: closed - Opened by jay-bhambhani about 1 month ago
- 2 comments
#100 - Feature request: detect when spot instances are pre-empted and re-submit
Issue -
State: open - Opened by aksarkar 2 months ago
- 3 comments
#99 - More elaborate mechanism to detect code changes?
Issue -
State: open - Opened by codethief 3 months ago
- 3 comments
#98 - Redun caching logic for a master_task
Issue -
State: open - Opened by njbernstein 4 months ago
- 2 comments
#97 - is there a way for an error to not stop redun from running non-dependent tasks?
Issue -
State: closed - Opened by njbernstein 4 months ago
- 2 comments
#96 - Windows compatibility
Issue -
State: closed - Opened by paulduf 4 months ago
- 2 comments
#95 - Specify vcpu and memory as resourceRequirements in AWS Batch executor
Pull Request -
State: closed - Opened by aotimme 4 months ago
- 1 comment
#94 - Dryrun does not yield expected output
Issue -
State: closed - Opened by aksarkar 6 months ago
- 2 comments
#93 - postgresql database doesn't upgrade version when using Scheduler.
Issue -
State: closed - Opened by njbernstein 6 months ago
- 6 comments
#92 - Scheduler limits bugfix
Pull Request -
State: closed - Opened by naegelyd-insitro 7 months ago
- 1 comment
#91 - Scheduler throws KeyError
Issue -
State: closed - Opened by lucasavila00 7 months ago
#90 - Suggestion: Provide a suitable, default `namespace` for each task
Issue -
State: open - Opened by Andrew-S-Rosen 9 months ago
#89 - Local docker problem when running conda example
Issue -
State: closed - Opened by tiendu 10 months ago
- 2 comments
#88 - Docker executor cannot recognize the volumes option.
Issue -
State: open - Opened by danielecook 11 months ago
#87 - How to isolate tasks in their own directory?
Issue -
State: open - Opened by Asutu about 1 year ago
#86 - pytest.sh
Pull Request -
State: open - Opened by gabriel-v about 1 year ago
#85 - One-liner to run pytest and lint under Docker
Issue -
State: open - Opened by gabriel-v about 1 year ago
#84 - Pg executor
Pull Request -
State: open - Opened by gabriel-v about 1 year ago
- 6 comments
#83 - ignore artifacts left over by py.test
Pull Request -
State: open - Opened by gabriel-v about 1 year ago
#82 - pin old version for textual
Pull Request -
State: closed - Opened by gabriel-v about 1 year ago
- 1 comment
#81 - ImportError: Package 'textual.widgets' has no class 'TextLog'
Issue -
State: closed - Opened by gabriel-v about 1 year ago
- 1 comment
#80 - script() does not accept argument list, only works with valid UTF-8 string
Issue -
State: open - Opened by gabriel-v about 1 year ago
- 2 comments
#79 - File/Dir - cannot use path made of non-utf8 bytestrings
Issue -
State: open - Opened by gabriel-v about 1 year ago
#78 - PostgreSQL Queue Executor (Distributed executor without Amazon/k8s)
Issue -
State: open - Opened by gabriel-v about 1 year ago
- 1 comment
#77 - Configure docker executor volumes from redun.ini
Issue -
State: closed - Opened by aksarkar about 1 year ago
- 2 comments
#76 - Merge upstream
Pull Request -
State: closed - Opened by ricomnl about 1 year ago
#75 - How to execute in local containers ?
Issue -
State: open - Opened by Melkaz over 1 year ago
- 2 comments
#74 - add compute query to get memory and cpu defaults
Pull Request -
State: closed - Opened by MSamman over 1 year ago
- 3 comments
#73 - split out version into it's own module
Pull Request -
State: closed - Opened by MSamman over 1 year ago
- 2 comments
#72 - Fix link on the "Scheduling redun workflows" docs page
Pull Request -
State: closed - Opened by wfondrie over 1 year ago
#71 - Update stale hyperlink in design.md
Pull Request -
State: closed - Opened by dekdaas over 1 year ago
#70 - Scatter-merge operation in redun?
Issue -
State: closed - Opened by PhilPalmer over 1 year ago
- 4 comments
#69 - [EXPLORE] Exploring moving File staging logic to Executors
Pull Request -
State: closed - Opened by mattrasmus over 1 year ago
- 3 comments
#68 - GCP batch support v2
Pull Request -
State: closed - Opened by mattrasmus over 1 year ago
- 3 comments
#67 - [feature request] add option to pass environment variables for script task
Issue -
State: open - Opened by tandav over 1 year ago
- 3 comments
#66 - GCP batch support
Pull Request -
State: closed - Opened by MSamman over 1 year ago
- 6 comments
#65 - Job array causes error message on older versions of k8s
Issue -
State: open - Opened by dakoner over 1 year ago
#64 - Changed cli, file and k8s files
Pull Request -
State: closed - Opened by ricomnl over 1 year ago
#63 - Remove develop mode for installing redun during docs build
Pull Request -
State: closed - Opened by mattrasmus over 1 year ago
#62 - CVE-2007-4559 Patch
Pull Request -
State: closed - Opened by TrellixVulnTeam almost 2 years ago
- 1 comment
#61 - Pass AWS_DEFAULT_REGION env variable to container
Pull Request -
State: closed - Opened by jsdir almost 2 years ago
- 3 comments
#60 - Fix import statements with lowercase config
Pull Request -
State: closed - Opened by danielecook almost 2 years ago
#59 - Overflow Error with Pickle Protocol 3
Issue -
State: open - Opened by TylerSpears about 2 years ago
- 2 comments
#58 - Please explain how to run redun server
Issue -
State: closed - Opened by Melkaz about 2 years ago
- 1 comment
#57 - fix pod deletion on job deletion
Pull Request -
State: closed - Opened by dakoner about 2 years ago
#56 - Database connection error after completing very long task
Issue -
State: open - Opened by spitz-dan-l about 2 years ago
#55 - DO NOT SUBMIT: K8s job specific secret- make a unique secret for each job
Pull Request -
State: closed - Opened by dakoner about 2 years ago
- 1 comment
#54 - Use user-defined namespace for AWS secrets.
Pull Request -
State: closed - Opened by dakoner about 2 years ago
- 1 comment
#53 - please document required setup for scheduling tasks from python code
Issue -
State: open - Opened by hamr about 2 years ago
- 2 comments
#52 - Fix a case where job completion wasn't being detected.
Pull Request -
State: closed - Opened by dakoner about 2 years ago
#51 - Checks k8s server version, disable array job if server is too old
Pull Request -
State: closed - Opened by dakoner about 2 years ago
#50 - Get k8s server version, default to no array jobs if server is too old.
Pull Request -
State: closed - Opened by dakoner about 2 years ago
#49 - adding graphviz-dev in Dockerfile to install with apt, and pygraphviz …
Pull Request -
State: closed - Opened by annashch-insitro about 2 years ago
#48 - Code packaging for script tasks
Issue -
State: open - Opened by spitz-dan-l about 2 years ago
#47 - Pass self.region to submit_command() from AWSBatchExecutor._submit_single_job()
Pull Request -
State: closed - Opened by spitz-dan-l about 2 years ago
#46 - Task-specific code packaging
Issue -
State: open - Opened by spitz-dan-l about 2 years ago
- 1 comment
#45 - Quality of life improvements for kubernetes executor
Pull Request -
State: closed - Opened by ricomnl about 2 years ago
- 3 comments
#44 - Add creation of namespace; ignore error if it already exists.
Pull Request -
State: closed - Opened by dakoner over 2 years ago
- 1 comment
#43 - K8s dakoner create namespace
Pull Request -
State: closed - Opened by dakoner over 2 years ago
#42 - Memory limits for local executor
Issue -
State: open - Opened by jshleap over 2 years ago
- 3 comments
#41 - Scheduler becomes a bottleneck when tasks return large python objects
Issue -
State: open - Opened by spitz-dan-l over 2 years ago
#40 - Revert 1 k8s improvements
Pull Request -
State: closed - Opened by ricomnl over 2 years ago
#39 - Add Docker image as task option
Issue -
State: closed - Opened by mstone-modulus over 2 years ago
- 9 comments
#38 - Bump pyspark from 3.1.1 to 3.1.3
Pull Request -
State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies
#37 - working on fixing docs build
Pull Request -
State: closed - Opened by mattrasmus over 2 years ago
#36 - Add missing data.tsv and fix cleanup default
Pull Request -
State: closed - Opened by mattrasmus over 2 years ago
- 1 comment
#35 - Docker executor: No such container
Issue -
State: closed - Opened by ricomnl over 2 years ago
- 3 comments
#34 - Google cloud
Issue -
State: closed - Opened by jshleap over 2 years ago
- 6 comments
#33 - Fixed typos and minor grammatical stuff like missing commas, etc. in the documentation and README.md
Pull Request -
State: closed - Opened by ricomnl over 2 years ago
#32 - Update README.md
Pull Request -
State: closed - Opened by sammun-insitro over 2 years ago
#31 - redun does not execute any code for a simple example
Issue -
State: closed - Opened by elanmart over 2 years ago
- 4 comments
#30 - Running redun pipelines locally with Docker
Issue -
State: closed - Opened by ricomnl over 2 years ago
- 7 comments
#29 - Conda executor and initial example
Pull Request -
State: closed - Opened by spitz-dan-l over 2 years ago
- 1 comment
#28 - Simplify set_arg_defaults.
Pull Request -
State: closed - Opened by lucaswiman over 2 years ago
- 3 comments
#27 - Cleaning up Batch jobs on unexpected termination
Issue -
State: open - Opened by spitz-dan-l over 2 years ago
- 1 comment
#26 - Integrate genomics libraries in Spark support
Issue -
State: open - Opened by heuermh over 2 years ago
- 1 comment
#25 - SLURM/HPC executor
Issue -
State: open - Opened by multimeric over 2 years ago
- 3 comments
#24 - AWS Batch executor enhancements: shared memory requirements, and more faithful local dev experience
Pull Request -
State: closed - Opened by spitz-dan-l over 2 years ago
- 7 comments
#23 - Hashing a Task to include its dependencies
Issue -
State: open - Opened by elanmart over 2 years ago
- 2 comments
#22 - Add k8s executor
Pull Request -
State: closed - Opened by mattrasmus over 2 years ago
- 5 comments
#21 - Tempdir in script
Pull Request -
State: open - Opened by spitz-dan-l over 2 years ago
#20 - For script tasks, `tempdir=True` with remote executor produces an error
Issue -
State: open - Opened by spitz-dan-l over 2 years ago
- 2 comments
#19 - K8s executor implementation
Pull Request -
State: closed - Opened by dakoner over 2 years ago
- 3 comments
#18 - Setting up the environment prior to task execution
Issue -
State: closed - Opened by spitz-dan-l over 2 years ago
- 3 comments
#17 - Config option `db_aws_secret_name` only works if the secret is in `us-west-2`
Issue -
State: closed - Opened by spitz-dan-l over 2 years ago
- 2 comments
#16 - Code packaging files in parent directories
Issue -
State: open - Opened by spitz-dan-l over 2 years ago
- 2 comments
#15 - Custom commandline argument parsing
Issue -
State: closed - Opened by spitz-dan-l over 2 years ago
- 2 comments
#14 - SQLalchemy caching warning
Issue -
State: closed - Opened by bbremer almost 3 years ago
- 3 comments
#13 - No need to use editable mode for redun install in examples
Pull Request -
State: closed - Opened by mattrasmus almost 3 years ago
#12 - Staging files
Issue -
State: closed - Opened by lyin-vir almost 3 years ago
- 2 comments
#11 - Fixes for several problems davidek saw
Pull Request -
State: closed - Opened by davidekhub almost 3 years ago
- 2 comments
#10 - Nesting tasks with different executors: confusing results
Issue -
State: closed - Opened by dakoner almost 3 years ago
- 3 comments
#9 - Can't stage out directory trees
Issue -
State: closed - Opened by dakoner almost 3 years ago
- 2 comments
#8 - Use pathlib.Path instead of strings for path
Issue -
State: open - Opened by flying-sheep almost 3 years ago
#7 - Use subprocess.run/check_output/… in examples
Issue -
State: closed - Opened by flying-sheep almost 3 years ago
- 1 comment
#6 - [TypeError: Expressions of unknown length cannot be iterated] when trying to iterate on task output
Issue -
State: closed - Opened by lyin-vir almost 3 years ago
- 2 comments
#5 - Fix typos discovered by codespell
Pull Request -
State: closed - Opened by cclauss almost 3 years ago
#4 - GitHub Action to run tox on every pull request
Pull Request -
State: closed - Opened by cclauss almost 3 years ago
#3 - Import Executor for lines 36 and 38
Pull Request -
State: closed - Opened by cclauss almost 3 years ago