Ecosyste.ms: Issues

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GitHub / insightsengineering/simIDM issues and pull requests

#113 - Use svg logo

Pull Request - State: open - Opened by llrs-roche about 2 months ago - 2 comments

#112 - URGENT! Failed CRAN Checks: 2024-11-03

Issue - State: open - Opened by github-actions[bot] 3 months ago

#111 - Workflow propagations

Pull Request - State: closed - Opened by walkowif 5 months ago

#110 - Workflow propagations

Pull Request - State: closed - Opened by walkowif 6 months ago - 3 comments

#109 - Workflow propagation

Pull Request - State: closed - Opened by walkowif 11 months ago

#108 - Suppress warning in trialplanning.Rmd

Pull Request - State: closed - Opened by holgstr about 1 year ago - 2 comments
Labels: bug

#107 - Warning displayed in Trial Planning Vignette

Issue - State: closed - Opened by holgstr about 1 year ago
Labels: bug

#106 - Add feedback from future devs

Pull Request - State: closed - Opened by holgstr about 1 year ago - 4 comments

#105 - Please undo your future::plan() when function exits

Issue - State: closed - Opened by HenrikBengtsson about 1 year ago - 1 comment

#104 - Workflow propagation

Pull Request - State: closed - Opened by walkowif about 1 year ago - 3 comments

#103 - adding better png logo versions

Pull Request - State: closed - Opened by danielinteractive about 1 year ago

#102 - 101: Create hex logo for `simIDM` and prepare for CRAN release [skip vbump]

Pull Request - State: closed - Opened by danielinteractive about 1 year ago - 3 comments

#101 - Create hex logo for `simIDM`

Issue - State: closed - Opened by danielinteractive about 1 year ago - 3 comments

#100 - 64: cleaning up `trialplanning.Rmd`

Pull Request - State: closed - Opened by danielinteractive about 1 year ago - 2 comments

#99 - 87: Add additional unit tests for survival helper functions

Pull Request - State: closed - Opened by danielinteractive about 1 year ago - 3 comments

#98 - 92: Add unit tests for correlation functions

Pull Request - State: closed - Opened by danielinteractive about 1 year ago - 3 comments

#97 - 74: closed form calculations for `PWCsurvOS`

Pull Request - State: closed - Opened by danielinteractive about 1 year ago - 3 comments

#96 - Vignette for correlation(PFS, OS)

Pull Request - State: closed - Opened by holgstr about 1 year ago - 5 comments
Labels: documentation

#95 - Fix mistake in corPFSOS bootstrap

Pull Request - State: closed - Opened by holgstr about 1 year ago - 3 comments
Labels: bug

#94 - Add bootstrap

Pull Request - State: closed - Opened by holgstr about 1 year ago - 3 comments
Labels: enhancement

#93 - Bootstrap for corPFSOS

Issue - State: closed - Opened by holgstr about 1 year ago
Labels: enhancement

#92 - Add unit tests for correlation functions

Issue - State: closed - Opened by holgstr about 1 year ago - 1 comment
Labels: devops

#91 - corPFSOS

Pull Request - State: closed - Opened by holgstr about 1 year ago - 5 comments
Labels: enhancement

#90 - Add function for PFS-OS correlation

Issue - State: closed - Opened by holgstr about 1 year ago
Labels: enhancement

#89 - Add unit test and coverage reports to pkgdown documentation

Pull Request - State: closed - Opened by walkowif about 1 year ago - 2 comments

#88 - add rpact to suggests

Pull Request - State: closed - Opened by holgstr about 1 year ago - 3 comments

#87 - Add additional unit tests for survival helper functions

Issue - State: closed - Opened by danielinteractive about 1 year ago
Labels: devops

#86 - Fix overflow error

Pull Request - State: closed - Opened by holgstr about 1 year ago - 6 comments
Labels: bug

#85 - Add progress bar to getClinicalTrials

Pull Request - State: closed - Opened by holgstr over 1 year ago - 2 comments
Labels: enhancement

#84 - estimateParams()

Pull Request - State: closed - Opened by holgstr over 1 year ago - 12 comments
Labels: enhancement

#83 - Add indicator of progress of simulations

Issue - State: closed - Opened by danielinteractive over 1 year ago
Labels: enhancement

#82 - Adds prepareData

Pull Request - State: closed - Opened by holgstr over 1 year ago - 3 comments
Labels: enhancement

#81 - Update Vignette

Pull Request - State: closed - Opened by holgstr over 1 year ago - 3 comments
Labels: enhancement

#80 - Fix WeibSurvOS

Pull Request - State: closed - Opened by holgstr over 1 year ago - 4 comments
Labels: bug

#79 - 77: fix problem for missing progression to death transitions

Pull Request - State: closed - Opened by danielinteractive over 1 year ago - 2 comments

#78 - WeibSurvOS throws error for large values of t

Issue - State: closed - Opened by holgstr over 1 year ago - 2 comments
Labels: bug

#77 - Assertion fails in `getPCWDistr`

Issue - State: closed - Opened by danielinteractive over 1 year ago

#76 - Fix data generating mechanism for exp+Weibull

Pull Request - State: closed - Opened by holgstr over 1 year ago - 4 comments
Labels: bug

#75 - Empirical survival function does not correspond to WeibSurvPFS

Issue - State: closed - Opened by holgstr over 1 year ago
Labels: bug

#74 - PWCsurvOS returns values larger than 1

Issue - State: closed - Opened by holgstr over 1 year ago - 4 comments
Labels: bug

#73 - Rewrite ExpSurvOS to prevent NaNs

Pull Request - State: closed - Opened by holgstr over 1 year ago - 13 comments

#72 - ExpSurvOS returns NaN when it should return 0

Issue - State: closed - Opened by holgstr over 1 year ago
Labels: bug

#71 - Update Trial Planning Vignette

Pull Request - State: closed - Opened by holgstr over 1 year ago - 8 comments
Labels: enhancement

#70 - 69: Function to compute empirical power for a list of simulated trials

Pull Request - State: closed - Opened by holgstr over 1 year ago - 4 comments
Labels: enhancement

#69 - Function to compute empirical power for a list of simulated trials

Issue - State: closed - Opened by holgstr over 1 year ago
Labels: enhancement

#68 - Function to compute quantiles of the OS Survival function for Constant Transition Hazards

Issue - State: closed - Opened by holgstr over 1 year ago - 1 comment
Labels: enhancement

#67 - 66: Add Function to compute average Hazard Ratio OS

Pull Request - State: closed - Opened by holgstr over 1 year ago - 3 comments
Labels: enhancement

#66 - Function to compute average Hazard Ratio OS

Issue - State: closed - Opened by holgstr over 1 year ago
Labels: enhancement

#65 - adds ExpHazOS function

Pull Request - State: closed - Opened by holgstr over 1 year ago - 9 comments
Labels: enhancement

#64 - error in trialplanning.Rmd

Issue - State: closed - Opened by moncham1 over 1 year ago - 2 comments
Labels: bug

#63 - Use token in spelling workflow

Pull Request - State: closed - Opened by walkowif over 1 year ago

#62 - Workflow propagation

Pull Request - State: closed - Opened by walkowif over 1 year ago - 2 comments

#61 - Workflow propagations

Pull Request - State: closed - Opened by walkowif over 1 year ago - 2 comments

#60 - Error in stats::integrate(f, ..., lower, upper) : non-finite function value

Issue - State: closed - Opened by nguyenducanhvn101087 over 1 year ago - 1 comment
Labels: bug

#59 - Update workflows

Pull Request - State: closed - Opened by walkowif over 1 year ago - 2 comments

#58 - Update token name

Pull Request - State: closed - Opened by walkowif almost 2 years ago - 2 comments

#57 - Updates to vignette

Issue - State: closed - Opened by numbersman77 almost 2 years ago - 1 comment
Labels: enhancement

#56 - Update assertions survival functions

Pull Request - State: closed - Opened by numbersman77 almost 2 years ago - 3 comments

#55 - Update pkgdown configuration

Pull Request - State: closed - Opened by walkowif almost 2 years ago - 2 comments

#54 - add CRAN badges to start page

Pull Request - State: closed - Opened by danielinteractive about 2 years ago - 2 comments

#53 - CRAN comments

Pull Request - State: closed - Opened by niessl about 2 years ago - 2 comments

#52 - # reducing runtime

Pull Request - State: closed - Opened by niessl about 2 years ago - 2 comments

#51 - # reduce runtime of trialplanning.rmd (#51) [skip vbump]

Pull Request - State: closed - Opened by niessl about 2 years ago - 2 comments

#50 - 49: fix description

Pull Request - State: closed - Opened by danielinteractive about 2 years ago - 2 comments

#49 - 49 description

Pull Request - State: closed - Opened by niessl about 2 years ago

#48 - 47: minor fixes

Pull Request - State: closed - Opened by danielinteractive about 2 years ago - 2 comments

#47 - minor fixes before CRAN submission

Issue - State: closed - Opened by danielinteractive about 2 years ago

#46 - 37: Cleanup before CRAN submission

Pull Request - State: closed - Opened by danielinteractive about 2 years ago - 2 comments

#45 - # READMME.rmd (knit to md did not work?)

Pull Request - State: closed - Opened by niessl about 2 years ago - 1 comment

#44 - Add a README

Issue - State: closed - Opened by danielinteractive about 2 years ago

#43 - 42: rename pkg

Pull Request - State: closed - Opened by danielinteractive about 2 years ago - 1 comment

#42 - Rename package etc. to `simIDM`

Issue - State: closed - Opened by danielinteractive about 2 years ago

#41 - # functions to get OS and PFS survival functions from transition hazards

Pull Request - State: closed - Opened by niessl about 2 years ago - 2 comments

#40 - # accrual and drop-out more flexible

Pull Request - State: closed - Opened by niessl about 2 years ago - 1 comment

#39 - Get survival function of OS and PFS from transition hazards

Issue - State: closed - Opened by niessl about 2 years ago

#38 - Accrual intensity

Issue - State: closed - Opened by niessl about 2 years ago

#37 - To do before first CRAN submission

Issue - State: closed - Opened by danielinteractive about 2 years ago

#36 - 32 vignette

Pull Request - State: closed - Opened by niessl about 2 years ago - 2 comments

#35 - Enable checks for `workflow_dispatch` event

Pull Request - State: closed - Opened by walkowif about 2 years ago - 2 comments

#34 - Revert "Add coverage badge"

Pull Request - State: closed - Opened by walkowif over 2 years ago - 1 comment

#33 - Add coverage badge

Pull Request - State: closed - Opened by walkowif over 2 years ago - 1 comment

#32 - Vignette for power calculations

Issue - State: closed - Opened by niessl over 2 years ago
Labels: documentation

#31 - # tests for Weibull and PWC added

Pull Request - State: closed - Opened by niessl over 2 years ago - 2 comments

#30 - #23 design for test to check simulated distributions with true ones.

Pull Request - State: closed - Opened by niessl over 2 years ago - 2 comments

#29 - Update check.yaml

Pull Request - State: closed - Opened by arkadiuszbeer over 2 years ago - 2 comments

#28 - 27 event tracking

Pull Request - State: closed - Opened by niessl over 2 years ago - 2 comments

#27 - Add event-tracking functions

Issue - State: closed - Opened by niessl over 2 years ago

#26 - 20: Add vignette

Pull Request - State: closed - Opened by danielinteractive over 2 years ago - 2 comments

#25 - # issue 24

Pull Request - State: closed - Opened by niessl almost 3 years ago - 2 comments

#24 - 24_add_getClinicalTrial

Issue - State: closed - Opened by niessl almost 3 years ago

#22 - 21 get simulated data

Pull Request - State: closed - Opened by niessl almost 3 years ago - 2 comments

#21 - 21_getSimulatedData

Issue - State: closed - Opened by niessl almost 3 years ago

#20 - Add introduction vignette

Issue - State: closed - Opened by danielinteractive almost 3 years ago - 1 comment
Labels: documentation

#19 - add function WaitTimeSum and test

Pull Request - State: closed - Opened by niessl almost 3 years ago - 2 comments

#18 - 18_add_getWaitTimeSum

Issue - State: closed - Opened by niessl almost 3 years ago

#17 - This function is not available?

Issue - State: closed - Opened by numbersman77 almost 3 years ago - 1 comment

#16 - issue 15

Pull Request - State: closed - Opened by niessl almost 3 years ago - 2 comments

#15 - add function getPCWDistr to main

Issue - State: closed - Opened by niessl almost 3 years ago