inscopix/inscopix-cnmfe issues and pull requests

#73 - Unsure on image pre-processing steps.

Issue - State: open - Opened by smbaca 7 months ago

#72 - [ImportError] Inscopix_cnmfe: DLL Load failed while importing

Issue - State: open - Opened by brian1000 about 1 year ago

#71 - Unable to process the tiff file

Issue - State: open - Opened by Cherk93 over 1 year ago - 1 comment

#70 - Fixed typo in src/isxCnmfeCore.cpp

Pull Request - State: closed - Opened by ryanirl over 1 year ago

#69 - Potential bug in `isxCnmfeCoree.cpp`

Issue - State: closed - Opened by ryanirl over 1 year ago - 1 comment

#68 - Is it possible to read .isxd files as input?

Issue - State: closed - Opened by zhoutianxun over 1 year ago - 1 comment

#67 - Unable to load my .tif file

Issue - State: open - Opened by zhouyi0812 over 1 year ago - 2 comments

#66 - DPD-188 add citation file

Pull Request - State: closed - Opened by brunoboivin over 2 years ago

#65 - Adds interactive widgets to build intuition about CNMFe parameters

Pull Request - State: closed - Opened by sg-s over 2 years ago - 20 comments

#64 - [new feature] include interactive tools to build intution about CNMFe parameters

Issue - State: closed - Opened by sg-s over 2 years ago
Labels: enhancement

#63 - DF/F normalized traces

Issue - State: closed - Opened by tawantayron over 2 years ago - 4 comments

#62 - update demo notebook

Pull Request - State: closed - Opened by brunoboivin almost 3 years ago

#61 - Inscopix CNMF-E Initial Release (version 1.0.2)

Pull Request - State: closed - Opened by brunoboivin almost 3 years ago

#60 - DPD-186 add long project description to package, update version to 1.0.2

Pull Request - State: closed - Opened by brunoboivin almost 3 years ago

#59 - DPD-185 update version to 1.0.1

Pull Request - State: closed - Opened by brunoboivin almost 3 years ago

#58 - Dpd 184 - add table of contents to docs

Pull Request - State: closed - Opened by nosheen-adil almost 3 years ago

#57 - DPD-182 add troubleshooting section to readme

Pull Request - State: closed - Opened by nosheen-adil almost 3 years ago

#56 - DPD-178 handle case where no cells are identified by CNMF-E

Pull Request - State: closed - Opened by brunoboivin almost 3 years ago

#55 - DPD-179 standardize variable names in docs and APIs

Pull Request - State: closed - Opened by brunoboivin almost 3 years ago

#54 - DPD-176 script to auto-generate wheel files

Pull Request - State: closed - Opened by brunoboivin about 3 years ago - 2 comments

#53 - DPD-173 fix memory-mapped file path issues

Pull Request - State: closed - Opened by brunoboivin about 3 years ago

#52 - Dpd 170

Pull Request - State: closed - Opened by brunoboivin about 3 years ago

#51 - DPD-168 docs comparing Inscopix-CNMFe to CaImAn

Pull Request - State: closed - Opened by brunoboivin about 3 years ago - 1 comment

#50 - DPD-170 return cnmfe outputs in python api

Pull Request - State: closed - Opened by brunoboivin about 3 years ago - 1 comment

#49 - DPD-169 add ability to select raw vs deconvolved traces

Pull Request - State: closed - Opened by brunoboivin about 3 years ago

#48 - extend demo notebook to show all cell footprints

Pull Request - State: closed - Opened by dougollerenshaw about 3 years ago - 7 comments

#47 - Dpd 163 - replace Qt with mio

Pull Request - State: closed - Opened by nosheen-adil about 3 years ago - 3 comments

#46 - DPD-165 update troubleshooting steps

Pull Request - State: closed - Opened by brunoboivin about 3 years ago

#45 - DPD-164 remove Qt dependencies for file IO

Pull Request - State: closed - Opened by brunoboivin about 3 years ago - 3 comments

#44 - DPD-160 cnmfe params documentation

Pull Request - State: closed - Opened by brunoboivin about 3 years ago - 1 comment

#43 - Acks

Pull Request - State: closed - Opened by shayqn about 3 years ago

#42 - DPD-158 Updates to logging system

Pull Request - State: closed - Opened by brunoboivin about 3 years ago

#41 - DPD-157 add license file to setup.py

Pull Request - State: closed - Opened by nosheen-adil about 3 years ago

#40 - DPD-156 create synth data in tests

Pull Request - State: closed - Opened by nosheen-adil about 3 years ago

#39 - DPD-155 fix minimal params bug in python api

Pull Request - State: closed - Opened by nosheen-adil about 3 years ago

#38 - License

Pull Request - State: closed - Opened by shayqn about 3 years ago - 1 comment

#37 - DPD-153 fix datatype bug in mmap

Pull Request - State: closed - Opened by nosheen-adil about 3 years ago - 1 comment

#36 - DPD-154 testing utilities to generate uint16 and float32 tiff movies

Pull Request - State: closed - Opened by brunoboivin about 3 years ago

#35 - DPD-152 update project documentation

Pull Request - State: closed - Opened by brunoboivin about 3 years ago

#34 - DPD-91 Add python API to Inscopix CNMFe

Pull Request - State: closed - Opened by brunoboivin about 3 years ago

#33 - Dpd-143 fix logging bug when writing to disk

Pull Request - State: closed - Opened by nosheen-adil about 3 years ago

#32 - DPD-148 update docker container and remove redundant test files

Pull Request - State: closed - Opened by brunoboivin about 3 years ago - 2 comments

#31 - Dpd 147 - clean up test outputs

Pull Request - State: closed - Opened by nosheen-adil about 3 years ago

#30 - Dpd 144 fix build configuration for Linux

Pull Request - State: closed - Opened by nosheen-adil about 3 years ago

#29 - DPD-142 add build instructions for Windows

Pull Request - State: closed - Opened by brunoboivin about 3 years ago

#28 - DPD-146 update utility functions to use Qt

Pull Request - State: closed - Opened by nosheen-adil about 3 years ago - 2 comments

#27 - Dpd 128 update memory mapping module

Pull Request - State: closed - Opened by nosheen-adil about 3 years ago - 1 comment