Ecosyste.ms: Issues

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GitHub / inlab-geo/cofi issues and pull requests

#164 - Make meta-heuristic algorithms provided by mealpy available in CoFI

Issue - State: open - Opened by auggiemarignier 10 months ago
Labels: collaboration opportunity

#164 - Make meta-heuristic algorithms provided by mealpy available in CoFI

Issue - State: open - Opened by auggiemarignier 10 months ago
Labels: collaboration opportunity

#163 - Make existing generic McMC samplers available in CoFI

Issue - State: open - Opened by auggiemarignier 10 months ago
Labels: collaboration opportunity

#163 - Make existing generic McMC samplers available in CoFI

Issue - State: open - Opened by auggiemarignier 10 months ago
Labels: collaboration opportunity

#162 - Make existing direct search methods available in CoFI

Issue - State: open - Opened by auggiemarignier 10 months ago
Labels: collaboration opportunity

#162 - Make existing direct search methods available in CoFI

Issue - State: open - Opened by auggiemarignier 10 months ago
Labels: collaboration opportunity

#161 - Add links to BayesBay; release v0.2.5

Pull Request - State: closed - Opened by jwhhh 10 months ago

#160 - Update docs/requirements.txt

Pull Request - State: closed - Opened by jwhhh 10 months ago

#159 - Update submodules

Pull Request - State: closed - Opened by github-actions[bot] 10 months ago

#158 - chore: release v0.2.4

Pull Request - State: closed - Opened by jwhhh 10 months ago

#157 - border collie optimization

Pull Request - State: closed - Opened by JuergHauser 12 months ago - 1 comment

#155 - Utils/parameterisation

Pull Request - State: closed - Opened by auggiemarignier about 1 year ago - 3 comments

#154 - Parameterisation Class

Issue - State: closed - Opened by auggiemarignier about 1 year ago - 6 comments
Labels: question, cofi utils

#153 - Contributor guide improvements; submodule update

Pull Request - State: closed - Opened by jwhhh about 1 year ago

#152 - Update submodules

Pull Request - State: closed - Opened by github-actions[bot] about 1 year ago

#151 - Update new_inference_tool.py

Pull Request - State: closed - Opened by JuergHauser about 1 year ago

#150 - Update contribute.rst

Pull Request - State: closed - Opened by JuergHauser about 1 year ago

#149 - chore: add tags to cofi methods

Pull Request - State: closed - Opened by jwhhh about 1 year ago

#148 - chore: update tags

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#147 - doc: some initial tagging

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#146 - add description tagging example

Pull Request - State: closed - Opened by Denghu-JI over 1 year ago

#145 - Update submodules

Pull Request - State: closed - Opened by github-actions[bot] over 1 year ago

#144 - Provide example tagging in init script

Pull Request - State: closed - Opened by Denghu-JI over 1 year ago

#143 - add yaml, for buttons content overide

Pull Request - State: closed - Opened by Denghu-JI over 1 year ago

#142 - New class cofi.utils.InversionPool; release v0.2.3

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#141 - chore: update submodule and docs

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#140 - chore: update documentation links to tools

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#139 - Update submodules

Pull Request - State: closed - Opened by github-actions[bot] over 1 year ago

#138 - ci: dispatch event to other repos

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#137 - Auto merge tagging

Pull Request - State: closed - Opened by Denghu-JI over 1 year ago

#135 - Simple newton updates; release v0.2.1

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#134 - Update submodules

Pull Request - State: closed - Opened by github-actions[bot] over 1 year ago

#133 - Automatic update of submodules

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#132 - ci: routine_submodule_update.yml

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#131 - chore: release v0.2.0

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#130 - Rewrite regularization utils

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#129 - Regularization utils for Gaussian prior

Issue - State: closed - Opened by jwhhh over 1 year ago
Labels: cofi utils, WIP

#128 - Regularization utils for p-norm functions

Issue - State: closed - Opened by jwhhh over 1 year ago
Labels: cofi utils, WIP

#127 - Enable setting components also in `BaseProblem.__init__()` constructor

Issue - State: open - Opened by jwhhh over 1 year ago
Labels: cofi core

#126 - Routinely check and raise pull request for submodules change

Issue - State: closed - Opened by jwhhh over 1 year ago
Labels: cofi scripts & CI

#125 - Implement `__repr__` methods for CoFI's classes

Issue - State: open - Opened by jwhhh over 1 year ago
Labels: cofi core

#124 - Have verbose levels in `.summary()` methods

Issue - State: open - Opened by jwhhh over 1 year ago
Labels: cofi core

#123 - Docs styling

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#122 - Add new examples into docs

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#121 - Updates to documentation dependencies and FAQ page

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#119 - Clarify what is done in `BaseProblem.set_regularization`

Issue - State: closed - Opened by jwhhh over 1 year ago
Labels: documentation, cofi core, WIP

#118 - Generate documentation for all the inference tools

Issue - State: closed - Opened by jwhhh over 1 year ago
Labels: documentation, cofi inference tools

#117 - docs: add cofi-gallery

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#116 - Bug fix, docs change and release v0.1.3.dev1

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#115 - Naming change for Espresso and new release

Pull Request - State: closed - Opened by jwhhh over 1 year ago

#114 - Espresso naming change

Pull Request - State: closed - Opened by jwhhh over 1 year ago - 1 comment

#113 - Create "CoFI User-contributed Showcase"

Issue - State: closed - Opened by jwhhh almost 2 years ago - 1 comment
Labels: documentation, WIP

#112 - Helper scripts to link new inference tool and tests

Pull Request - State: closed - Opened by jwhhh almost 2 years ago

#111 - API change: `BaseSolver` into `BaseInferenceTool`

Pull Request - State: closed - Opened by jwhhh almost 2 years ago

#110 - Use `BaseInferenceTool` instead of `BaseSolver` for consistency

Issue - State: closed - Opened by jwhhh almost 2 years ago
Labels: cofi core, WIP

#108 - Utility regularization for flattening and smoothing in 1D cases

Issue - State: closed - Opened by jwhhh almost 2 years ago
Labels: bug, cofi utils, WIP

#107 - List all available algorithms under CoFI documentation

Issue - State: closed - Opened by jwhhh almost 2 years ago - 1 comment
Labels: documentation, cofi inference tools

#106 - Tag solvers hierarchically through the inference tree

Issue - State: closed - Opened by jwhhh almost 2 years ago - 1 comment
Labels: cofi core, cofi inference tools

#105 - Utility regularization for triangular mesh

Issue - State: closed - Opened by jwhhh almost 2 years ago - 1 comment
Labels: cofi utils

#104 - fix: _version file

Pull Request - State: closed - Opened by jwhhh almost 2 years ago

#103 - build: using versioningit

Pull Request - State: closed - Opened by jwhhh almost 2 years ago

#102 - Core API change

Pull Request - State: closed - Opened by jwhhh almost 2 years ago

#101 - docs: make subsections of examples

Pull Request - State: closed - Opened by jwhhh almost 2 years ago

#100 - docs: some notes on emcee in parallel

Pull Request - State: closed - Opened by jwhhh almost 2 years ago

#99 - Create helper script to link new tool

Issue - State: closed - Opened by jwhhh almost 2 years ago
Labels: cofi scripts & CI

#98 - Wording changes

Issue - State: closed - Opened by jwhhh almost 2 years ago
Labels: documentation, cofi core, cofi inference tools, WIP

#97 - Make `walkers_start_pos` a property of `InversionOptions` instead of `BaseProblem`

Issue - State: closed - Opened by jwhhh almost 2 years ago
Labels: cofi core, WIP

#96 - docs: update examples

Pull Request - State: closed - Opened by jwhhh almost 2 years ago

#95 - Documentation examples/tutorials update

Pull Request - State: closed - Opened by jwhhh almost 2 years ago

#93 - Documentation improvements

Issue - State: closed - Opened by jwhhh about 2 years ago
Labels: documentation

#92 - List pytorch optim algorithms dynamically

Issue - State: closed - Opened by jwhhh about 2 years ago
Labels: cofi inference tools, WIP

#91 - Raise warning when people set solver params that are not in optional list

Issue - State: closed - Opened by jwhhh about 2 years ago
Labels: cofi core, WIP

#90 - Change `suggest_solvers` into `suggest_tools`

Issue - State: closed - Opened by jwhhh about 2 years ago
Labels: cofi core, WIP

#89 - Avoid importing third party modules on `import cofi`

Issue - State: closed - Opened by jwhhh about 2 years ago
Labels: cofi inference tools, WIP

#88 - feat: decorators to handle errors in solving

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#87 - docs: minor updates

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#86 - Using decorators to handle errors in solvers

Issue - State: closed - Opened by jwhhh about 2 years ago
Labels: cofi inference tools

#85 - Pytorch updates (callback, # evaluations, better losses tensor, docs)

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#84 - Use versioningit

Issue - State: closed - Opened by jwhhh about 2 years ago
Labels: cofi scripts & CI, WIP

#83 - fix: bug in pytorch returned dict; release v0.1.2.dev20

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#82 - chore: minor fix; release v0.1.2.dev19

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#81 - Adding PyTorch.optim solver

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#80 - Changes in BaseSolver and BaseProblem

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#79 - More explanation in BaseProblem.summary; release v0.1.2.dev15

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#78 - Documentation update; code_cov.yml fix

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#77 - Removed all cmake configs

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#76 - Bug fixes; Release v0.1.2.dev13

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#75 - Minor changes in cofi.simple_newton; release v0.1.2.dev12

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#74 - Add line search in `simple_newton` solver

Issue - State: closed - Opened by jwhhh about 2 years ago
Labels: cofi inference tools

#73 - Simple Newton method; bugs fix; release v0.1.2.dev11

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#72 - Problem with InvalidOptionError when running gravity_density.ipynb

Issue - State: closed - Opened by td-jones about 2 years ago - 1 comment
Labels: bug, WIP

#71 - Release v0.1.2.dev10; renaming, data misfit & lstsq improvements

Pull Request - State: closed - Opened by jwhhh about 2 years ago

#70 - Words renaming `optimise` -> `optimize`, etc.

Issue - State: closed - Opened by jwhhh about 2 years ago
Labels: documentation, cofi core, cofi inference tools, cofi utils, WIP

#69 - Document solvers library

Issue - State: closed - Opened by jwhhh about 2 years ago - 1 comment
Labels: documentation

#68 - Optimise special cases in linear system solver

Issue - State: closed - Opened by jwhhh about 2 years ago
Labels: cofi inference tools, WIP