Ecosyste.ms: Issues

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GitHub / inab/benchmarking-data-model issues and pull requests

#149 - Bump actions/download-artifact from 3 to 4.1.7 in /.github/workflows

Pull Request - State: open - Opened by dependabot[bot] 2 months ago
Labels: dependencies, github_actions

#147 - Add hints about acceptable metric ranges

Issue - State: open - Opened by jmfernandez 12 months ago

#146 - Implement participant's mask

Issue - State: closed - Opened by abredondo about 1 year ago - 1 comment
Labels: invalid, wontfix

#144 - Regular expressions cause issues with Python 3.11

Issue - State: closed - Opened by jmfernandez over 1 year ago - 2 comments
Labels: bug, 1.0.X

#140 - Better define "representation_hints" (in Metrics.json)

Issue - State: open - Opened by lcodo over 1 year ago - 1 comment
Labels: enhancement

#139 - Add pubmed as a valid bibliographic_ids

Issue - State: closed - Opened by abredondo almost 2 years ago - 1 comment

#138 - Allow Dataset with no rel_dataset_ids

Issue - State: closed - Opened by redmitry about 2 years ago - 2 comments

#137 - add "on_delete_hint" to the foreign keys.

Issue - State: open - Opened by redmitry over 2 years ago - 2 comments

#136 - OEB portal uses "Logo" as option from "Links" section

Issue - State: closed - Opened by lidix91 over 2 years ago - 1 comment

#135 - Data model should consider licenses

Issue - State: closed - Opened by jmfernandez over 2 years ago - 1 comment

#134 - Modeling Project Spaces: new "Project" entity or "Communities" extension

Issue - State: open - Opened by lcodo over 2 years ago - 1 comment
Labels: enhancement, discussion F2F

#133 - Revert "Revisiting enum values for community status"

Pull Request - State: closed - Opened by jmfernandez almost 3 years ago

#132 - Revisiting enum values for community status

Pull Request - State: closed - Opened by lcodo almost 3 years ago - 1 comment

#131 - replace "@" with double "__"

Issue - State: closed - Opened by redmitry about 3 years ago - 4 comments

#130 - Should _`email`_ be a required key in `Contacts`?

Issue - State: closed - Opened by jmfernandez over 3 years ago - 4 comments

#129 - Authors of reference.json

Issue - State: closed - Opened by sthhher over 3 years ago - 7 comments

#128 - Include keywords for scientific community, benchmarking events and challenge

Issue - State: closed - Opened by scapella over 3 years ago - 1 comment
Labels: enhancement

#127 - Explicitly differentiate "analysis" Tools from "benchmarking" Tools

Issue - State: open - Opened by lcodo over 3 years ago - 2 comments

#126 - Add "Participation Model" to Benchmarking Event

Issue - State: closed - Opened by lcodo over 3 years ago - 1 comment

#125 - Support anonymous Tools

Issue - State: closed - Opened by lcodo over 3 years ago - 7 comments
Labels: enhancement

#124 - add backup uris to dataset

Issue - State: closed - Opened by jmfernandez over 3 years ago - 1 comment
Labels: enhancement

#123 - add community_id to the Reference

Issue - State: closed - Opened by redmitry over 3 years ago - 7 comments

#122 - Review accepted values of `visibility` in several concepts

Issue - State: closed - Opened by jmfernandez over 3 years ago - 2 comments

#121 - Improve testAction documentation

Issue - State: open - Opened by jmfernandez over 3 years ago - 2 comments

#120 - Add deletion_date to all the concepts

Issue - State: closed - Opened by jmfernandez over 3 years ago - 1 comment

#119 - Update CAMEO prototype data to schema 1.0.x

Pull Request - State: closed - Opened by xrobin over 3 years ago - 2 comments

#118 - Datasets should have version provisioning

Issue - State: closed - Opened by jmfernandez almost 4 years ago - 5 comments

#117 - add "roles" to the Contact.

Pull Request - State: closed - Opened by redmitry about 4 years ago

#116 - add "community_roles" security attribute

Pull Request - State: closed - Opened by redmitry about 4 years ago - 1 comment

#115 - Contacts should include the community_roles

Issue - State: closed - Opened by redmitry about 4 years ago - 7 comments
Labels: inactive

#114 - added b2share metadata OEB schema

Pull Request - State: closed - Opened by javi-gv94 about 4 years ago - 2 comments

#113 - TestAction "_metadata" vs "metadata" properties

Issue - State: closed - Opened by redmitry over 4 years ago - 4 comments

#112 - TestAction types: AggregationEvent vs. StatisticEvent

Issue - State: closed - Opened by javi-gv94 over 4 years ago - 1 comment
Labels: inactive

#111 - Metrics labels

Issue - State: closed - Opened by javi-gv94 over 4 years ago - 2 comments
Labels: invalid, question

#110 - Community schema '_id'

Issue - State: closed - Opened by javi-gv94 about 5 years ago - 1 comment
Labels: enhancement, invalid

#109 - Reference schema '_id'

Issue - State: closed - Opened by javi-gv94 about 5 years ago - 2 comments

#108 - Tool types

Issue - State: closed - Opened by javi-gv94 over 5 years ago - 1 comment
Labels: enhancement, question, 1.0.X, inactive

#107 - Challenge schema

Issue - State: closed - Opened by javi-gv94 over 5 years ago - 2 comments
Labels: bug, 1.0.X

#106 - Add the label "Logo" to links property in Community Schema.

Issue - State: closed - Opened by vsundesha over 5 years ago - 1 comment
Labels: enhancement, 1.0.X

#105 - Changed the structure of the implementations field in the Metrics Schema

Pull Request - State: closed - Opened by vsundesha over 5 years ago - 1 comment

#104 - Structure of the implementations field in the Metrics Schema

Issue - State: closed - Opened by vsundesha over 5 years ago - 2 comments
Labels: bug, invalid

#103 - URIs validation in data link

Issue - State: open - Opened by lcodo over 5 years ago - 2 comments

#102 - Regex pattern in "orig_id" does not validate in Java

Issue - State: closed - Opened by vsundesha over 5 years ago - 1 comment
Labels: bug

#101 - Replace required "tool_id" for "community_ids" in the Implementations field for the Metrics Schema

Issue - State: closed - Opened by vsundesha over 5 years ago - 1 comment
Labels: bug, enhancement

#100 - visibility added to required in Dataset Schema

Pull Request - State: closed - Opened by vsundesha over 5 years ago

#99 - community_id in Tool and Metrics schemas

Issue - State: closed - Opened by javi-gv94 over 5 years ago - 4 comments
Labels: enhancement, 1.0.X

#98 - Metrics Visualization

Issue - State: closed - Opened by javi-gv94 over 5 years ago - 3 comments
Labels: enhancement, question, later

#97 - Expand the metrics concept to include other "operations" like visualization, validation, etc.

Issue - State: closed - Opened by jlgelpi over 5 years ago - 4 comments
Labels: enhancement, discussion F2F, 1.0.X

#96 - Add 'community id' to Tool. Updated TCGA data

Pull Request - State: closed - Opened by javi-gv94 over 5 years ago - 2 comments

#95 - "visibility" field in Dataset schema

Issue - State: closed - Opened by vsundesha over 5 years ago - 1 comment
Labels: enhancement, question, discussion F2F, 1.0.X

#94 - Dataset - datalink not validated against latest schema

Issue - State: closed - Opened by javi-gv94 over 5 years ago - 2 comments
Labels: bug, 1.0.X

#93 - acronym for challenge schema.

Issue - State: closed - Opened by vsundesha over 5 years ago - 5 comments
Labels: enhancement, 1.0.X

#92 - dataset schema crashes validator

Issue - State: closed - Opened by javi-gv94 over 5 years ago - 1 comment
Labels: bug, 1.0.X

#91 - Community.Metrics_categories.metrics.tool_id to Metrics?

Issue - State: closed - Opened by jlgelpi over 5 years ago - 2 comments
Labels: question, 1.0.X

#90 - Idsolv endpoints

Issue - State: closed - Opened by jlgelpi over 5 years ago - 1 comment
Labels: 1.0.X

#89 - Idsolv pattern property

Issue - State: closed - Opened by vsundesha over 5 years ago - 2 comments
Labels: enhancement, 1.0.X

#88 - Dataset, Datalink types

Issue - State: closed - Opened by jlgelpi over 5 years ago - 4 comments
Labels: question, 1.0.X, inactive

#87 - Deposition policy

Issue - State: closed - Opened by jlgelpi over 5 years ago - 1 comment
Labels: enhancement, 1.0.X

#86 - Inconsistencies between the keys in different schemas

Issue - State: closed - Opened by vsundesha over 5 years ago - 1 comment
Labels: 1.0.X

#85 - TestAction required / additional fields

Issue - State: closed - Opened by jlgelpi over 5 years ago - 4 comments
Labels: question, 1.0.X

#84 - Tool tool_access_type(_id) mismatch field name and required list

Issue - State: closed - Opened by jlgelpi over 5 years ago - 4 comments
Labels: bug, 1.0.X

#83 - Tool 1.0 community_id is still marked as required.

Issue - State: closed - Opened by jlgelpi over 5 years ago - 5 comments
Labels: discussion F2F, 1.0.X

#82 - Reserve " t " for temporary identifiers

Issue - State: closed - Opened by vsundesha over 5 years ago - 10 comments
Labels: enhancement, discussion F2F, 1.0.X

#81 - Explicit data access consent

Issue - State: closed - Opened by scapella almost 6 years ago - 3 comments
Labels: enhancement, question, later

#80 - Challenge 1.0 Participants is no longer required

Issue - State: closed - Opened by jlgelpi almost 6 years ago - 1 comment
Labels: bug, 1.0.X

#79 - AAI management

Issue - State: closed - Opened by jlgelpi almost 6 years ago - 6 comments
Labels: enhancement, discussion F2F, Open new project

#78 - Fixing issues #67 #74 #76

Pull Request - State: closed - Opened by javi-gv94 almost 6 years ago

#78 - Fixing issues #67 #74 #76

Pull Request - State: closed - Opened by javi-gv94 almost 6 years ago

#77 - Keywords/tags in community schema

Issue - State: closed - Opened by javi-gv94 almost 6 years ago - 1 comment
Labels: enhancement, question

#76 - dataset_ids end testActions in Challenge are redundant

Issue - State: closed - Opened by jlgelpi almost 6 years ago - 2 comments

#76 - dataset_ids end testActions in Challenge are redundant

Issue - State: closed - Opened by jlgelpi almost 6 years ago - 2 comments

#75 - _id definitions in schemas should be modified to consider the new identifiers

Issue - State: closed - Opened by jlgelpi almost 6 years ago - 1 comment

#74 - Community_namespaces is now obsolete

Issue - State: closed - Opened by jlgelpi almost 6 years ago - 1 comment

#74 - Community_namespaces is now obsolete

Issue - State: closed - Opened by jlgelpi almost 6 years ago - 1 comment

#73 - Assessment datasets - link to data

Issue - State: closed - Opened by javi-gv94 almost 6 years ago - 4 comments
Labels: enhancement, 0.4.x Implementation

#72 - Add label attribute to some schemas

Issue - State: closed - Opened by javi-gv94 almost 6 years ago - 5 comments
Labels: enhancement, 0.4.x Implementation

#71 - challenge pointer in dataset schema

Pull Request - State: closed - Opened by javi-gv94 almost 6 years ago - 2 comments

#70 - Dataset schema: metrics error

Issue - State: closed - Opened by javi-gv94 almost 6 years ago - 8 comments
Labels: enhancement, question, 0.4.x Implementation

#69 - 2nd QfO data adapted to v. 0.4

Pull Request - State: closed - Opened by javi-gv94 about 6 years ago
Labels: 0.4.x Implementation

#68 - QfO data adapted to v. 0.4

Pull Request - State: closed - Opened by javi-gv94 about 6 years ago - 1 comment
Labels: 0.4.x Implementation

#67 - One more attribute in Dataset schema

Issue - State: closed - Opened by javi-gv94 about 6 years ago - 4 comments
Labels: enhancement, 0.4.x Implementation

#66 - OPEB References

Issue - State: closed - Opened by jlgelpi about 6 years ago - 6 comments
Labels: enhancement, question, discussion F2F, 0.4.x Implementation

#65 - Sample TCGA data

Pull Request - State: closed - Opened by javi-gv94 about 6 years ago
Labels: enhancement, 0.4.x Implementation

#64 - Minor changes in some schemas to enable validation

Issue - State: closed - Opened by javi-gv94 about 6 years ago - 2 comments
Labels: bug, 0.4.x Implementation

#63 - TestAction > received_datasets

Issue - State: closed - Opened by javi-gv94 about 6 years ago - 1 comment
Labels: question, 0.4.x Implementation

#62 - Challenge > datasets/roles

Issue - State: closed - Opened by javi-gv94 about 6 years ago - 1 comment
Labels: question, 0.4.x Implementation

#61 - Suggestion of new attribute in Challenge schema

Issue - State: closed - Opened by javi-gv94 about 6 years ago - 4 comments
Labels: enhancement

#60 - Accessibility models

Issue - State: closed - Opened by scapella over 6 years ago - 1 comment
Labels: question

#59 - TestAction: public?

Issue - State: closed - Opened by jlgelpi over 6 years ago
Labels: question, wontfix, 0.4.x Implementation

#58 - TestAction: need "setup" type

Issue - State: closed - Opened by jlgelpi over 6 years ago - 1 comment
Labels: enhancement, 0.4.x Implementation

#57 - TestAction model: recover input/output

Issue - State: closed - Opened by jlgelpi over 6 years ago - 1 comment
Labels: question, 0.4.x Implementation

#56 - Dataset model: Need Access_level

Issue - State: closed - Opened by jlgelpi over 6 years ago - 2 comments
Labels: enhancement, 0.4.x Implementation

#55 - Dataset model: Need a version of "datalink" for raw scores, perhaps renamed to score or data

Issue - State: closed - Opened by jlgelpi over 6 years ago - 1 comment
Labels: enhancement, 0.4.x Implementation

#54 - Dataset model: Add metrics_id to depends_on

Issue - State: closed - Opened by jlgelpi over 6 years ago - 1 comment
Labels: 0.4.x Implementation

#53 - Dataset model: add community_id

Issue - State: closed - Opened by jlgelpi over 6 years ago - 1 comment
Labels: 0.4.x Implementation