Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / imageomics/pybioclip issues and pull requests

#80 - Add Progress Bar

Issue - State: open - Opened by work4cs 1 day ago - 2 comments

#79 - Add Fine-tune RidgeClassifier example notebook

Pull Request - State: open - Opened by johnbradley 13 days ago - 3 comments

#78 - Add Fine-tune SVM example notebook

Pull Request - State: closed - Opened by johnbradley 24 days ago - 1 comment

#77 - Question - Drop-in replacement for other models that use CLIP?

Issue - State: closed - Opened by Jordan-Pierce 27 days ago - 4 comments

#76 - Add fine-tuning documentation

Issue - State: open - Opened by johnbradley about 1 month ago - 1 comment

#76 - Add fine-tuning documentation

Issue - State: open - Opened by johnbradley about 1 month ago - 3 comments

#75 - Fix .zenodo.json and add test

Pull Request - State: closed - Opened by johnbradley about 1 month ago - 3 comments

#74 - Fix zenodo metadata

Issue - State: closed - Opened by johnbradley about 1 month ago - 1 comment

#73 - Create version 1.2.0

Pull Request - State: closed - Opened by johnbradley about 2 months ago

#73 - Create version 1.2.0

Pull Request - State: closed - Opened by johnbradley about 2 months ago

#73 - Create version 1.2.0

Pull Request - State: closed - Opened by johnbradley about 2 months ago

#72 - Improve Docker and Acknowledgments Documentation

Pull Request - State: closed - Opened by johnbradley about 2 months ago

#72 - Improve Docker and Acknowledgments Documentation

Pull Request - State: closed - Opened by johnbradley about 2 months ago

#71 - Fix predict.py link in Acknowledgments

Issue - State: closed - Opened by johnbradley about 2 months ago

#71 - Fix predict.py link in Acknowledgments

Issue - State: closed - Opened by johnbradley about 2 months ago

#71 - Fix predict.py link in Acknowledgments

Issue - State: closed - Opened by johnbradley about 2 months ago

#70 - Improve Acknowledgments

Pull Request - State: closed - Opened by johnbradley about 2 months ago - 1 comment

#70 - Improve Acknowledgments

Pull Request - State: closed - Opened by johnbradley about 2 months ago - 1 comment

#70 - Improve Acknowledgments

Pull Request - State: closed - Opened by johnbradley about 2 months ago - 1 comment

#69 - Improve Acknowledgments

Issue - State: closed - Opened by johnbradley about 2 months ago

#69 - Improve Acknowledgments

Issue - State: closed - Opened by johnbradley about 2 months ago

#69 - Improve Acknowledgments

Issue - State: closed - Opened by johnbradley about 2 months ago

#68 - Clarify docker cache directory instructions

Issue - State: closed - Opened by johnbradley about 2 months ago

#68 - Clarify docker cache directory instructions

Issue - State: closed - Opened by johnbradley about 2 months ago

#68 - Clarify docker cache directory instructions

Issue - State: closed - Opened by johnbradley about 2 months ago

#67 - Clarify safety and ease of use

Issue - State: open - Opened by johnbradley about 2 months ago

#67 - Clarify safety and ease of use

Issue - State: open - Opened by johnbradley about 2 months ago

#67 - Clarify safety and ease of use

Issue - State: open - Opened by johnbradley about 2 months ago

#66 - Add mkdocs documentation

Pull Request - State: closed - Opened by johnbradley about 2 months ago - 3 comments

#66 - Add mkdocs documentation

Pull Request - State: closed - Opened by johnbradley about 2 months ago - 3 comments

#66 - Add mkdocs documentation

Pull Request - State: closed - Opened by johnbradley about 2 months ago - 3 comments

#65 - Cleanup Documentation

Issue - State: closed - Opened by johnbradley about 2 months ago

#65 - Cleanup Documentation

Issue - State: closed - Opened by johnbradley about 2 months ago

#65 - Cleanup Documentation

Issue - State: closed - Opened by johnbradley about 2 months ago

#64 - Add changes to work better with pytorch-grad-cam

Pull Request - State: closed - Opened by johnbradley 2 months ago - 3 comments

#64 - Add changes to work better with pytorch-grad-cam

Pull Request - State: closed - Opened by johnbradley 2 months ago - 3 comments

#63 - Add --subset argument to predict command

Pull Request - State: closed - Opened by johnbradley 2 months ago - 15 comments

#63 - Add --subset argument to predict command

Pull Request - State: closed - Opened by johnbradley 2 months ago - 15 comments

#63 - Add --subset argument to predict command

Pull Request - State: closed - Opened by johnbradley 2 months ago - 15 comments

#62 - Display help menus more promptly

Pull Request - State: open - Opened by thompsonmj 2 months ago - 8 comments

#62 - Display help menus more promptly

Pull Request - State: open - Opened by thompsonmj 2 months ago - 8 comments

#61 - Update help menus in README

Pull Request - State: closed - Opened by thompsonmj 2 months ago - 3 comments

#61 - Update help menus in README

Pull Request - State: closed - Opened by thompsonmj 2 months ago - 3 comments

#61 - Update help menus in README

Pull Request - State: closed - Opened by thompsonmj 2 months ago - 3 comments

#60 - Display help menus more promptly

Pull Request - State: closed - Opened by thompsonmj 3 months ago - 2 comments

#60 - Display help menus more promptly

Pull Request - State: closed - Opened by thompsonmj 3 months ago - 2 comments

#59 - Allow subsetting TOL classifier

Pull Request - State: closed - Opened by johnbradley 3 months ago - 2 comments

#59 - Allow subsetting TOL classifier

Pull Request - State: closed - Opened by johnbradley 3 months ago - 2 comments

#58 - `bioclip --help` output update

Issue - State: closed - Opened by egrace479 3 months ago - 2 comments
Labels: question

#58 - `bioclip --help` output update

Issue - State: closed - Opened by egrace479 3 months ago - 2 comments
Labels: question

#58 - `bioclip --help` output update

Issue - State: closed - Opened by egrace479 3 months ago - 2 comments
Labels: question

#57 - The CLI help menus are slow to display

Issue - State: open - Opened by thompsonmj 3 months ago

#57 - The CLI help menus are slow to display

Issue - State: open - Opened by thompsonmj 3 months ago

#57 - The CLI help menus are slow to display

Issue - State: open - Opened by thompsonmj 3 months ago

#56 - Allow subsetting TreeOfLifeClassifier

Issue - State: closed - Opened by johnbradley 3 months ago - 2 comments

#56 - Allow subsetting TreeOfLifeClassifier

Issue - State: closed - Opened by johnbradley 3 months ago - 2 comments

#56 - Allow subsetting TreeOfLifeClassifier

Issue - State: closed - Opened by johnbradley 3 months ago - 2 comments

#55 - Allow using PIL with predict functions

Pull Request - State: closed - Opened by johnbradley 3 months ago

#55 - Allow using PIL with predict functions

Pull Request - State: closed - Opened by johnbradley 3 months ago

#55 - Allow using PIL with predict functions

Pull Request - State: closed - Opened by johnbradley 3 months ago

#54 - Simplify passing PIL images

Issue - State: closed - Opened by johnbradley 3 months ago - 24 comments

#54 - Simplify passing PIL images

Issue - State: closed - Opened by johnbradley 3 months ago - 24 comments

#53 - Add binning to custom label prediction

Pull Request - State: closed - Opened by johnbradley 4 months ago

#53 - Add binning to custom label prediction

Pull Request - State: closed - Opened by johnbradley 4 months ago

#51 - Fix .zenodo.json

Pull Request - State: closed - Opened by johnbradley 4 months ago

#51 - Fix .zenodo.json

Pull Request - State: closed - Opened by johnbradley 4 months ago

#50 - Fix Zenodo JSON

Issue - State: closed - Opened by johnbradley 4 months ago - 1 comment

#50 - Fix Zenodo JSON

Issue - State: closed - Opened by johnbradley 4 months ago - 1 comment

#50 - Fix Zenodo JSON

Issue - State: closed - Opened by johnbradley 4 months ago - 1 comment

#49 - Citation 1.1.0

Pull Request - State: closed - Opened by johnbradley 4 months ago

#48 - Create publish-to-pypi.yml

Pull Request - State: closed - Opened by johnbradley 4 months ago

#48 - Create publish-to-pypi.yml

Pull Request - State: closed - Opened by johnbradley 4 months ago

#48 - Create publish-to-pypi.yml

Pull Request - State: closed - Opened by johnbradley 4 months ago

#47 - Automate upload to PyPI

Issue - State: closed - Opened by johnbradley 4 months ago

#46 - Update version to 1.1.0

Pull Request - State: closed - Opened by johnbradley 4 months ago - 1 comment

#45 - Support for GradCam

Issue - State: closed - Opened by johnbradley 4 months ago - 1 comment

#44 - Update container README links and fix Apptainer push

Pull Request - State: closed - Opened by johnbradley 4 months ago - 2 comments

#43 - Fix failing apptainer push

Issue - State: closed - Opened by johnbradley 4 months ago - 1 comment

#42 - Add README link to custom model documentation

Pull Request - State: closed - Opened by johnbradley 4 months ago - 1 comment

#42 - Add README link to custom model documentation

Pull Request - State: closed - Opened by johnbradley 4 months ago - 1 comment

#42 - Add README link to custom model documentation

Pull Request - State: closed - Opened by johnbradley 4 months ago - 1 comment

#41 - Add apptainer support

Pull Request - State: closed - Opened by johnbradley 5 months ago - 1 comment

#41 - Add apptainer support

Pull Request - State: closed - Opened by johnbradley 5 months ago - 1 comment

#41 - Add apptainer support

Pull Request - State: closed - Opened by johnbradley 5 months ago - 1 comment

#40 - Adds Dockerfile + release container building

Pull Request - State: closed - Opened by johnbradley 5 months ago - 4 comments

#40 - Adds Dockerfile + release container building

Pull Request - State: closed - Opened by johnbradley 5 months ago - 4 comments

#40 - Adds Dockerfile + release container building

Pull Request - State: closed - Opened by johnbradley 5 months ago - 4 comments

#39 - Adds Dockerfile to build a container

Pull Request - State: closed - Opened by johnbradley 5 months ago - 1 comment

#39 - Adds Dockerfile to build a container

Pull Request - State: closed - Opened by johnbradley 5 months ago - 1 comment

#39 - Adds Dockerfile to build a container

Pull Request - State: closed - Opened by johnbradley 5 months ago - 1 comment

#38 - Enable torch.load weights_only=True

Pull Request - State: closed - Opened by johnbradley 5 months ago - 1 comment

#38 - Enable torch.load weights_only=True

Pull Request - State: closed - Opened by johnbradley 5 months ago - 1 comment

#38 - Enable torch.load weights_only=True

Pull Request - State: closed - Opened by johnbradley 5 months ago - 1 comment

#37 - Add --cls-file to predict command

Pull Request - State: closed - Opened by johnbradley 5 months ago - 2 comments

#37 - Add --cls-file to predict command

Pull Request - State: closed - Opened by johnbradley 5 months ago - 2 comments

#37 - Add --cls-file to predict command

Pull Request - State: closed - Opened by johnbradley 5 months ago - 2 comments

#36 - Add automated testing config

Pull Request - State: closed - Opened by johnbradley 5 months ago