imagej/imagej2 issues and pull requests

#316 - [bug] auto generate desktop entry when start program

Issue - State: open - Opened by Kiri2002 2 months ago

#315 - Abandon JAVA?

Issue - State: open - Opened by jobs-git 5 months ago

#314 - Scale to DPI seems to be broken

Issue - State: closed - Opened by CanYing0913 8 months ago - 4 comments

#313 - Thank you!

Issue - State: open - Opened by zWhdmB5T 9 months ago

#312 - ROI selection

Issue - State: open - Opened by Dennet02 10 months ago

#311 - Original ImageJ logic gets invoked in pure ImageJ2 GUI mode

Issue - State: open - Opened by ctrueden about 1 year ago

#310 - Spurious "Ignoring unsupported script" debug messages on startup

Issue - State: open - Opened by ctrueden about 1 year ago

#309 - Please bump `commons-text` to 1.10.0 or newer

Issue - State: closed - Opened by Jarek-Sacha almost 2 years ago - 2 comments

#308 - Oversaturated colors on P3 monitors

Issue - State: open - Opened by hyungsongnam about 2 years ago - 5 comments

#307 - Press L to focus to search bar on Channels window

Issue - State: closed - Opened by hyungsongnam over 2 years ago - 6 comments

#306 - Expand installation options

Issue - State: open - Opened by hinerm over 9 years ago - 5 comments
Labels: deployment

#305 - Clean up native platform naming across ImageJ2 components

Issue - State: open - Opened by ctrueden over 2 years ago - 2 comments

#304 - Script Editor windows are not fully integrated into the Window menu

Issue - State: open - Opened by ctrueden over 2 years ago

#303 - Latest update - script editor now hangs when opening scripts

Issue - State: closed - Opened by hyungsongnam over 2 years ago - 1 comment

#302 - java.awt.HeadlessException when running command

Issue - State: closed - Opened by julien2424 over 2 years ago - 4 comments

#301 - Exception in thread "main" java.lang.IllegalArgumentException: Invalid service: net.imagej.legacy.LegacyService

Issue - State: closed - Opened by workhours over 2 years ago - 3 comments

#300 - Information printing into console when opening images with Bio-Formats

Issue - State: closed - Opened by etadobson almost 3 years ago - 2 comments

#299 - Problem with Watershed

Issue - State: closed - Opened by Pantelispanka almost 3 years ago - 2 comments

#297 - how to solve such captcha?

Issue - State: closed - Opened by RussiaVk almost 3 years ago

#296 - ImageJ 1.53f51 - click and hold behaves like control click

Issue - State: closed - Opened by hyungsongnam about 3 years ago - 1 comment

#295 - Rename artifact from net.imagej:imagej to sc.fiji:fiji-core

Issue - State: open - Opened by ctrueden about 3 years ago - 1 comment

#294 - Add generation of application zip to CI build

Issue - State: open - Opened by ctrueden about 3 years ago

#293 - mvn -Papp fixes

Pull Request - State: closed - Opened by Grimler91 about 3 years ago - 2 comments

#291 - Channels window repositions automatically after opening an image with an additional channel

Issue - State: closed - Opened by hyungsongnam about 3 years ago - 2 comments

#290 - FracLac for imagej

Issue - State: open - Opened by Biz7662 about 3 years ago

#289 - Save as Raw Data

Issue - State: closed - Opened by supercheney about 3 years ago - 1 comment

#288 - Measuring dark brown

Issue - State: closed - Opened by Biz7662 about 3 years ago - 2 comments

#287 - README: add hit counter badge (daily/total)

Pull Request - State: closed - Opened by imagejan over 3 years ago - 1 comment

#286 - Bug in String.format()

Issue - State: closed - Opened by quantixed over 3 years ago - 1 comment

#285 - Save image sequence keep using the name of volume as a prefix

Issue - State: closed - Opened by Khoa-NT over 3 years ago

#284 - Support for jpeg xl

Issue - State: open - Opened by benjaminbrumbaugh over 3 years ago - 1 comment

#283 - Mac Native M1 (arm64) support?

Issue - State: open - Opened by dstranathan over 3 years ago - 5 comments

#282 - Will ImageJ get rid of using Java?

Issue - State: closed - Opened by amh737 over 3 years ago - 3 comments

#281 - Macro recording fails to save parameters

Issue - State: open - Opened by manerotoni over 3 years ago - 1 comment

#280 - 3D viewer error when opening

Issue - State: open - Opened by amirDahari1 over 3 years ago - 1 comment

#279 - Fully automate dev setup with Gitpod

Pull Request - State: closed - Opened by Crawlerlm92 over 3 years ago - 2 comments

#278 - Change imageJ Default Memory Setting

Issue - State: open - Opened by wpkurtz over 3 years ago - 3 comments

#277 - Selection tool and GUI update

Issue - State: open - Opened by victorsapucaia over 3 years ago

#276 - Macro getVersion() return does NOT include daily build number

Issue - State: closed - Opened by rgaiacs over 3 years ago - 2 comments

#275 - "NameError: name 'command' is not defined" when running ImageJ jython script headless

Issue - State: open - Opened by markemus almost 4 years ago - 1 comment

#274 - Overlay Elements' Save as... raises exception in thread "AWT-EventQueue-0" java.lang.NullPointerException

Issue - State: closed - Opened by rgaiacs almost 4 years ago - 3 comments

#273 - Maven build problem

Issue - State: open - Opened by BarchSteel almost 4 years ago - 8 comments

#272 - Version number in "About ImageJ" does not match real version

Issue - State: open - Opened by BarchSteel almost 4 years ago - 1 comment

#271 - Pluggin segmenting less number of particles using ImageJ version 1.53f

Issue - State: open - Opened by TeresaSilva almost 4 years ago - 2 comments

#270 - List [of Overlay] Elements doesn't update automatically

Issue - State: open - Opened by rgaiacs almost 4 years ago

#269 - String index out of range when doing a complex inverse FFT

Issue - State: open - Opened by ovcretzu almost 4 years ago

#268 - Please support multiple frames in PGM file format

Issue - State: open - Opened by BarchSteel almost 4 years ago - 6 comments

#267 - Trigger popup menu with long press

Issue - State: open - Opened by oeway almost 4 years ago

#266 - Feature request: add magnifying glass popup menu

Issue - State: closed - Opened by oeway almost 4 years ago - 3 comments

#265 - getValue() not returning intensity measures of line selections?

Issue - State: open - Opened by jo-fuchs almost 4 years ago

#264 - Coloc 2 log does not identify (by number, name or location) which ROI has been analyzed

Issue - State: open - Opened by Msgds almost 4 years ago

#263 - Extra file types are not displayed with SCIFIO on

Issue - State: open - Opened by karlduderstadt almost 4 years ago - 6 comments

#262 - Opening multichannel tile scans results in tile rearrangement

Issue - State: open - Opened by sjmurphy1994 almost 4 years ago - 1 comment

#261 - Disabling "Save column headers" on I/O options does not disable column headers

Issue - State: closed - Opened by bruvellu about 4 years ago - 2 comments

#260 - FFT line intensity profile shows units in [nm] rather than [1/nm]

Issue - State: open - Opened by Iron1759 about 4 years ago

#259 - Issue (NonBlockingGenericDialog) while running in headless mode

Issue - State: open - Opened by ghost about 4 years ago - 9 comments

#258 - Problem with EventHandler annotation in ImageJ legacy UI

Issue - State: open - Opened by spiderpig36 about 4 years ago - 1 comment

#257 - How to batch process .raw file and get gray value?

Issue - State: open - Opened by ImageDragon0112 about 4 years ago - 1 comment

#256 - Enable CORS for the sample images on imagej.net

Issue - State: closed - Opened by oeway about 4 years ago - 2 comments

#255 - Maven repository issues

Issue - State: closed - Opened by sebastian-raubach about 4 years ago - 3 comments

#254 - Violating XDG base directory standard

Issue - State: open - Opened by stephenstrangeMD about 4 years ago - 2 comments

#253 - Parameters with visibility = ItemVisibility.MESSAGE block macro execution by showing a dialog

Issue - State: closed - Opened by mdoube about 4 years ago - 4 comments

#252 - ImageJ logo update

Pull Request - State: closed - Opened by elevans over 4 years ago - 2 comments

#250 - Color Thresholder causing java.awt.HeadlessException when run in headless mode

Issue - State: closed - Opened by davidhampson over 4 years ago - 4 comments

#249 - Java runtime errors on launch: namespace reporting not enabled

Issue - State: open - Opened by lindensmith over 4 years ago - 3 comments

#248 - Drag and drop doesn't work on Mac, if I open a file from finder

Issue - State: open - Opened by shubham21994 over 4 years ago

#247 - Document TIFF tags used by imagej

Issue - State: open - Opened by tfeo over 4 years ago

#246 - I am using ij.jar in java mode, the java code is:IJ.run(imp, "Auto Threshold", "otsu white"); but get Unrecognized command: "Auto Threshold",how to resolve this question??

Issue - State: closed - Opened by JanLiao over 4 years ago - 1 comment

#245 - Fiji on Windows 10 won't launch with Korean characters in the path

Issue - State: open - Opened by gyuregor over 4 years ago - 7 comments

#244 - What method is called on the "Apply" button?

Issue - State: closed - Opened by loomcode over 4 years ago - 2 comments

#243 - TIFF and PNG import ignores embedded ICC color profile => wrong colors in non-sRGB images

Issue - State: open - Opened by DerAndere1 almost 5 years ago - 1 comment

#242 - ImageJ.sh: remove deprecated GC options

Pull Request - State: closed - Opened by camlloyd almost 5 years ago - 1 comment

#241 - Starting Fiji from command line does interpret arguments only the very first time

Issue - State: closed - Opened by Michael-Gaehwiler about 5 years ago - 1 comment

#240 - Channels Tool seems broken on MacOS FIJI/ImageJ

Issue - State: closed - Opened by hyungsongnam about 5 years ago - 18 comments

#239 - Bioformat plugin "java.io.Filenotfound...read only"

Issue - State: closed - Opened by aaubry89 over 5 years ago

#238 - images larger than 2^29 pixels do not open/load properly

Issue - State: open - Opened by vasarhelyi over 5 years ago - 26 comments

#235 - Mirror https://romulus.oice.uni-erlangen.de/maven/repository on maven.imagej.net

Issue - State: closed - Opened by imagejan over 5 years ago - 6 comments

#234 - 实现互动抠图，如opencv的grabcut

Issue - State: closed - Opened by chenyong001 over 5 years ago - 1 comment

#229 - Open Recent does not show Drag n Dropped Files

Issue - State: open - Opened by kapoorlab over 5 years ago - 1 comment

#227 - Feature: additional image axes

Issue - State: closed - Opened by ctr26 over 5 years ago - 3 comments

#224 - Add scijava-plugins-io-table dependency

Pull Request - State: closed - Opened by imagejan over 5 years ago - 6 comments

#220 - [modern mode] no way back

Issue - State: closed - Opened by Borda almost 6 years ago - 1 comment

#201 - Updater: "row index is bigger than sorter's row count"

Issue - State: open - Opened by cortig over 6 years ago - 4 comments
Labels: unscheduled

#197 - Improve behavior with Java 10

Issue - State: open - Opened by ctrueden over 6 years ago - 14 comments

#195 - ImageJ does not run with java 10 on Linux

Issue - State: closed - Opened by cjkopas over 6 years ago - 3 comments

#182 - Add Dockerfile for ImageJ.app

Pull Request - State: open - Opened by joshmoore almost 7 years ago - 2 comments

#178 - Retire jenkins.imagej.net

Issue - State: closed - Opened by ctrueden almost 7 years ago - 9 comments

#172 - Drag and drop ImageJ2 .czi .zvi files with Bio-Formats

Issue - State: closed - Opened by cyrilturies about 7 years ago - 2 comments

#166 - opens garbled tiffs from USGS aerial imagery archives

Issue - State: closed - Opened by riveryeti over 7 years ago - 3 comments

#135 - Switch to Java 8

Issue - State: closed - Opened by ctrueden almost 9 years ago - 1 comment
Labels: deployment, java8

#124 - Consider creating a Homebrew tap for ImageJ2

Issue - State: open - Opened by ctrueden over 9 years ago
Labels: unscheduled

#122 - Redesign the issue reporting system

Issue - State: open - Opened by ctrueden over 9 years ago - 6 comments
Labels: to do

#118 - Create stable installers and "portable app" bundle

Issue - State: open - Opened by ctrueden over 9 years ago - 2 comments
Labels: deployment

#105 - Remove tools.jar dependency

Issue - State: open - Opened by hinerm almost 10 years ago - 8 comments
Labels: deployment

#98 - Fix "Run single instance listener" feature

Issue - State: closed - Opened by ctrueden about 10 years ago - 12 comments

#87 - Tiled browser interface

Issue - State: open - Opened by ctrueden over 10 years ago - 2 comments

#72 - Create a Windows installer for ImageJ2/Fiji

Issue - State: open - Opened by ctrueden over 10 years ago - 30 comments
Labels: deployment

GitHub / imagej/imagej2 issues and pull requests