ihmeuw/vivarium_cluster_tools issues and pull requests

#132 - Separate environment variables into a module

Pull Request - State: closed - Opened by collijk over 2 years ago

#131 - Add a worker subpackage

Pull Request - State: closed - Opened by collijk over 2 years ago - 1 comment

#130 - Add redis_dbs subpackage

Pull Request - State: closed - Opened by collijk over 2 years ago

#129 - Add environment variable abstraction

Pull Request - State: closed - Opened by collijk over 2 years ago

#128 - Add a bunch of comments to the main process

Pull Request - State: closed - Opened by collijk over 2 years ago

#127 - Add jobs abstractions

Pull Request - State: closed - Opened by collijk over 2 years ago

#126 - Ditch the RunContext entirely

Pull Request - State: closed - Opened by collijk over 2 years ago

#125 - Extract keyspace creation logic

Pull Request - State: closed - Opened by collijk over 2 years ago

#124 - Add output paths container

Pull Request - State: closed - Opened by collijk over 2 years ago

#123 - Add input paths container

Pull Request - State: closed - Opened by collijk over 2 years ago

#122 - Refactor/output paths

Pull Request - State: closed - Opened by collijk over 2 years ago

#121 - Remove dead args to main

Pull Request - State: closed - Opened by collijk over 2 years ago

#120 - Separate error handling and results writing

Pull Request - State: closed - Opened by collijk over 2 years ago

#119 - Isolate results handling code

Pull Request - State: closed - Opened by collijk over 2 years ago

#118 - Share logging code

Pull Request - State: closed - Opened by collijk over 2 years ago

#117 - Isolate cluster interaction code

Pull Request - State: closed - Opened by collijk over 2 years ago

#116 - Pull out all the programming environment code into its own module

Pull Request - State: closed - Opened by collijk over 2 years ago

#115 - Release candidate 1.2.13

Pull Request - State: closed - Opened by collijk over 2 years ago

#114 - ci/black-and-isort

Pull Request - State: closed - Opened by collijk over 2 years ago

#113 - Ci/black and isort

Pull Request - State: closed - Opened by collijk over 2 years ago

#112 - Add pull request template to repository

Pull Request - State: closed - Opened by collijk over 2 years ago

#111 - Release candidate 1.2.12

Pull Request - State: closed - Opened by collijk over 2 years ago

#110 - version bump

Pull Request - State: closed - Opened by collijk over 2 years ago

#109 - Try dependencies to reduce overhead

Pull Request - State: closed - Opened by collijk over 2 years ago

#108 - Ci/use workflow dependencies

Pull Request - State: closed - Opened by collijk over 2 years ago

#107 - log error if batching retries run out

Pull Request - State: closed - Opened by rmudambi over 2 years ago

#106 - Feature/mic 2556 black

Pull Request - State: closed - Opened by mattkappel over 2 years ago

#105 - Release 1.2.10 into develop from main

Pull Request - State: closed - Opened by mattkappel almost 3 years ago - 1 comment

#104 - Change pip freeze usage to use command rather than internal method

Pull Request - State: closed - Opened by mattkappel almost 3 years ago - 1 comment

#103 - release 1.2.10

Pull Request - State: closed - Opened by mattkappel almost 3 years ago

#102 - Merge develop into main for release.

Pull Request - State: closed - Opened by mattkappel almost 3 years ago

#101 - Add zenodo.json file and update license to BSD 3-clause

Pull Request - State: closed - Opened by mattkappel almost 3 years ago

#100 - enable parallelizing a script

Pull Request - State: closed - Opened by rmudambi almost 3 years ago

#99 - Release v1.2.9

Pull Request - State: closed - Opened by rmudambi almost 3 years ago

#98 - fix zombie job bug

Pull Request - State: closed - Opened by rmudambi almost 3 years ago

#97 - Set loglevel to debug for redis-server

Pull Request - State: closed - Opened by mattkappel almost 3 years ago

#96 - set worker logging at debug

Pull Request - State: closed - Opened by rmudambi about 3 years ago

#95 - MIC-2360 save redis logs to log directory

Pull Request - State: closed - Opened by mattkappel about 3 years ago

#94 - MIC-2556: Results of running Black

Pull Request - State: closed - Opened by mattkappel about 3 years ago

#93 - Develop

Pull Request - State: closed - Opened by collijk about 3 years ago

#92 - Don't print results in worker logs

Pull Request - State: closed - Opened by collijk about 3 years ago

#91 - Release v1.2.6

Pull Request - State: closed - Opened by rmudambi about 3 years ago

#90 - allow psimulate to create result root directories

Pull Request - State: closed - Opened by rmudambi about 3 years ago

#89 - Standardize CI scripts, upgrade readthedocs, add API documentation

Pull Request - State: closed - Opened by collijk over 3 years ago

#88 - unpin rq and redis

Pull Request - State: closed - Opened by rmudambi over 3 years ago

#87 - remove references to msgpack

Pull Request - State: closed - Opened by rmudambi over 3 years ago

#86 - MIC-2308, -2320: automate vipin in psimulate and delete vparse

Pull Request - State: closed - Opened by mattkappel over 3 years ago

#85 - Feature/mic 2308 2320 automate vipin delete vparse

Pull Request - State: closed - Opened by mattkappel over 3 years ago - 1 comment

#84 - Add missing function argument to restart and expand functions

Pull Request - State: closed - Opened by KjellSwedin over 3 years ago

#83 - add documentation requirements to setup.py

Pull Request - State: closed - Opened by rmudambi over 3 years ago

#82 - modify branch config file example to match a valid use case

Pull Request - State: closed - Opened by rmudambi over 3 years ago

#81 - Feature/mic 2290 complex scenario logging

Pull Request - State: closed - Opened by mattkappel over 3 years ago

#80 - MIC-2307: Add single worker log for all performance log messages

Pull Request - State: closed - Opened by mattkappel over 3 years ago

#79 - Add vipin tool and performance telemetry to parallel worker log

Pull Request - State: closed - Opened by mattkappel over 3 years ago

#78 - add command line argument to specify artifact path to psimulate

Pull Request - State: closed - Opened by rmudambi over 3 years ago - 1 comment

#77 - MIC-2298: Add no_cleanup option to avoid auto delete on failure

Pull Request - State: closed - Opened by mattkappel over 3 years ago

#76 - Feature/branches artifact

Pull Request - State: closed - Opened by rmudambi over 3 years ago

#75 - MIC-2171: Added worker log timing messages and prototype cli

Pull Request - State: closed - Opened by mattkappel over 3 years ago - 1 comment

#74 - Push changes from develop in preparation for release

Pull Request - State: closed - Opened by KjellSwedin over 3 years ago

#73 - Add deploy script

Pull Request - State: closed - Opened by KjellSwedin over 3 years ago

#72 - Feature/GitHub actions ci

Pull Request - State: closed - Opened by KjellSwedin over 3 years ago

#71 - Unpin pandas, numpy, and tables

Pull Request - State: closed - Opened by KjellSwedin almost 4 years ago

#70 - Develop

Pull Request - State: closed - Opened by rmudambi almost 4 years ago

#69 - pin rq to 1.2.2

Pull Request - State: closed - Opened by rmudambi almost 4 years ago

#68 - Alter some jargon

Pull Request - State: closed - Opened by aflaxman almost 4 years ago

#67 - Add atexit handlers to cleanup dir when psimulate produces no output.hdf

Pull Request - State: closed - Opened by mattkappel about 4 years ago

#66 - Develop

Pull Request - State: closed - Opened by collijk about 4 years ago

#65 - Write unwritten results if the simulation is interrupted.

Pull Request - State: closed - Opened by KjellSwedin about 4 years ago

#64 - Isolate IHME-specific SGE configuration

Pull Request - State: closed - Opened by halfhorst over 4 years ago

GitHub / ihmeuw/vivarium_cluster_tools issues and pull requests