igvteam/spacewalk issues and pull requests

#304 - Refactors and Ongoing jQuery Cleanse

Pull Request - State: closed - Opened by turner 3 months ago - 2 comments

#303 - Discard MaterialLibrary

Pull Request - State: closed - Opened by turner 3 months ago - 1 comment

#302 - Update README

Pull Request - State: closed - Opened by turner 3 months ago - 1 comment

#301 - Update sass

Pull Request - State: closed - Opened by turner 3 months ago - 1 comment

#300 - Add missing sass file _file-load-widget.scss.

Pull Request - State: closed - Opened by turner 3 months ago - 1 comment

#299 - Refactor how URL params are ingested. Fixes Share URL bug

Pull Request - State: closed - Opened by turner 3 months ago - 1 comment

#298 - Temporary fix for bug: Loaded Share URL does not render Hi-C Map

Pull Request - State: closed - Opened by turner 3 months ago - 1 comment

#297 - Bug fix: Live Ensemble Distance Map

Pull Request - State: closed - Opened by turner 4 months ago - 1 comment

#296 - Juicebox Panel - Live Map Consolidation

Pull Request - State: closed - Opened by turner 4 months ago - 1 comment

#295 - Project Directory Reorg. UI Improvements

Pull Request - State: closed - Opened by turner 5 months ago - 1 comment

#294 - Juicebox Panel - Tabbed Maps UI Improvements

Pull Request - State: closed - Opened by turner 5 months ago - 1 comment

#293 - Juicebox - Tabbed Maps

Pull Request - State: closed - Opened by turner 5 months ago - 2 comments

#292 - Bootstrap Update. Numerous Functionality Improvement.

Pull Request - State: closed - Opened by turner 5 months ago - 2 comments

#291 - Bug fix - Juicebox cross hair repair for session load

Pull Request - State: closed - Opened by turner 6 months ago - 1 comment

#290 - Add Fullscreen Mode

Pull Request - State: closed - Opened by turner 7 months ago - 1 comment

#289 - Remove restriction for Chrome browser only.

Pull Request - State: closed - Opened by turner 7 months ago - 2 comments

#288 - Add an About and Help Navbar item

Pull Request - State: closed - Opened by turner 7 months ago - 2 comments

#287 - Restore minimal support for CNDB file format

Pull Request - State: closed - Opened by turner 7 months ago - 1 comment

#286 - Revive live contact maps

Pull Request - State: closed - Opened by turner 7 months ago - 2 comments

#285 - Save EnsembleGroup key to session

Pull Request - State: closed - Opened by turner 7 months ago - 2 comments

#284 - Bug fixes

Pull Request - State: closed - Opened by turner 8 months ago - 2 comments

#283 - Major Updates to Spacewalk

Pull Request - State: closed - Opened by turner 8 months ago - 2 comments

#282 - UI Changes

Pull Request - State: closed - Opened by turner 8 months ago - 2 comments

#281 - Pointcloud Improvements

Pull Request - State: closed - Opened by turner 8 months ago - 2 comments

#280 - Pointcloud Size and Transparency

Pull Request - State: closed - Opened by turner 8 months ago - 2 comments

#279 - Binary Spacewalk Files: Now support Live Contact Maps

Pull Request - State: closed - Opened by turner 8 months ago - 1 comment

#278 - HDF5 Format Updates

Pull Request - State: closed - Opened by turner 9 months ago - 2 comments

#277 - DataValueMaterialProvider - better mapping of track features to 3D structure

Pull Request - State: closed - Opened by turner 9 months ago - 1 comment

#276 - Misc. Dev

Pull Request - State: closed - Opened by turner 10 months ago - 2 comments

#275 - Support CNDB for Pointcloud and Ball & Stick

Pull Request - State: closed - Opened by turner 11 months ago - 2 comments

#274 - Reorganize Directory Structure. Misc. Development.

Pull Request - State: closed - Opened by turner 12 months ago - 2 comments

#273 - PointCloud - Bug fix for DataValueMaterialProvider setting from igv

Pull Request - State: closed - Opened by turner over 1 year ago - 1 comment

#272 - Add centering dot for better pan/drag/rotate U/X

Pull Request - State: closed - Opened by turner over 1 year ago - 1 comment

#271 - Map Track Features to Point Cloud - Ongoing

Pull Request - State: closed - Opened by turner almost 2 years ago - 1 comment

#270 - Map track feature colors to pointcloud

Issue - State: closed - Opened by turner almost 2 years ago - 1 comment

#269 - PointClouds: Implement live distance and contact maps

Issue - State: closed - Opened by turner almost 2 years ago - 1 comment

#268 - Select multiple genomic segments.

Issue - State: open - Opened by turner almost 2 years ago

#267 - Pointcloud deemphasis rethink

Pull Request - State: closed - Opened by turner almost 2 years ago - 1 comment

#266 - Pointcloud deemphasis rethink

Pull Request - State: closed - Opened by turner almost 2 years ago

#265 - Pointcloud Highlighting. Unhighlighted points are backdrop for highlighted points

Pull Request - State: closed - Opened by turner almost 2 years ago - 1 comment

#264 - PointCloud highlight. Massive improvement in highlighting performance

Pull Request - State: closed - Opened by turner almost 2 years ago - 1 comment

#263 - Use igvjs branch via npm

Pull Request - State: closed - Opened by turner almost 2 years ago - 1 comment

#262 - Walking along the IGV tracks doesn't work in the shared links

Issue - State: closed - Opened by gnir almost 2 years ago - 14 comments

#261 - hg38 is the default genome assembly

Pull Request - State: closed - Opened by turner almost 2 years ago - 1 comment

#260 - Use igvjs genome management

Pull Request - State: closed - Opened by turner almost 2 years ago - 1 comment

#259 - Gray localizations hiding highlighted localizations

Issue - State: closed - Opened by gnir almost 2 years ago - 16 comments

#258 - Trace number

Issue - State: closed - Opened by gnir almost 2 years ago - 3 comments

#257 - DataValue MaterialProvider bug fix - color for feature

Pull Request - State: closed - Opened by turner almost 2 years ago - 1 comment

#256 - Incorrect behavior when loading a local bed file into IGV

Issue - State: closed - Opened by kairukuma almost 2 years ago - 12 comments

#255 - Genome wrangling - share url bug fix

Pull Request - State: closed - Opened by turner almost 2 years ago - 1 comment

#254 - Bed/bedgraph file not recognized

Issue - State: closed - Opened by gnir almost 2 years ago - 38 comments

#253 - Genome Wrangling

Pull Request - State: closed - Opened by turner almost 2 years ago - 1 comment

#252 - Refactor Genome wrangling

Pull Request - State: closed - Opened by turner almost 2 years ago - 1 comment

#251 - Better initialization experience

Pull Request - State: closed - Opened by turner almost 2 years ago - 1 comment

#250 - Cgi demo 27 jan 2023

Pull Request - State: closed - Opened by turner about 2 years ago - 1 comment

#249 - Fix IGV Panel resize bug

Pull Request - State: closed - Opened by turner about 2 years ago - 1 comment

#248 - Implement streaming HDF5 file reading

Pull Request - State: closed - Opened by turner about 2 years ago - 1 comment

#247 - Refactor use npm juicebox

Pull Request - State: closed - Opened by turner about 2 years ago - 1 comment

#246 - Spike - Single ensemble. 10000 traces. 5000 beads per trace.

Pull Request - State: closed - Opened by turner about 2 years ago - 1 comment

#245 - Share URL Bug Fix

Pull Request - State: closed - Opened by turner about 2 years ago - 1 comment

#244 - Ribbon refactors

Pull Request - State: closed - Opened by turner about 2 years ago - 1 comment

#243 - Igv panel session state issues

Pull Request - State: closed - Opened by turner about 2 years ago - 1 comment

#242 - HDF5 Project

Pull Request - State: closed - Opened by turner over 2 years ago - 1 comment

#241 - JB live contact map - rebased - sharing added - merge conflict fix

Pull Request - State: closed - Opened by turner over 2 years ago - 1 comment

#240 - Juicebox live contact map rebase fixed merge conflicts

Pull Request - State: closed - Opened by turner over 2 years ago - 1 comment

#239 - Session bug fix - parsing point cloud data

Pull Request - State: closed - Opened by turner over 2 years ago - 1 comment

#238 - Shareable - Bug fix. Absence of Loaded HiC Map Nolonger Crashes URL Generation

Pull Request - State: closed - Opened by turner over 2 years ago - 1 comment

#237 - share button layout tweaks

Pull Request - State: closed - Opened by turner over 2 years ago - 1 comment

#236 - Implement shareable URL

Pull Request - State: closed - Opened by turner over 2 years ago - 1 comment

#235 - Juicebox live contact map

Pull Request - State: closed - Opened by turner over 2 years ago - 1 comment

#234 - Menu title edits

Pull Request - State: closed - Opened by turner over 2 years ago - 1 comment

#233 - Enable Panning - Now Using MapControl to Replace OrbitControl

Pull Request - State: closed - Opened by turner over 2 years ago - 1 comment

#232 - Distance Map - Contact Map Refactors

Pull Request - State: closed - Opened by turner over 2 years ago - 1 comment

#231 - Vite Build - Numerous Feature Additions

Pull Request - State: closed - Opened by turner almost 3 years ago - 1 comment

#230 - Bump three from 0.115.0 to 0.137.0

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago - 1 comment
Labels: dependencies

#229 - Bump node-fetch from 2.6.0 to 3.1.1

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago - 1 comment
Labels: dependencies

#228 - Bump follow-redirects from 1.11.0 to 1.14.7

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago - 1 comment
Labels: dependencies

#227 - Bump path-parse from 1.0.6 to 1.0.7

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#226 - Ball & Stick, ball radius cannot be changed

Issue - State: closed - Opened by turner over 3 years ago

#225 - Bump browserslist from 4.12.0 to 4.16.6

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#224 - Bump lodash from 4.17.15 to 4.17.21

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#223 - Bump three from 0.115.0 to 0.125.0

Pull Request - State: closed - Opened by dependabot[bot] almost 4 years ago - 1 comment
Labels: dependencies

#222 - Point cloud format

Issue - State: closed - Opened by nchernia about 4 years ago - 1 comment

#221 - Bump node-fetch from 2.6.0 to 2.6.1

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#220 - Bump http-proxy from 1.18.0 to 1.18.1

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#219 - Bump lodash from 4.17.15 to 4.17.19

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#218 - Performance Improvements. Various Refactors. Ongoing Session Work.

Pull Request - State: closed - Opened by turner over 4 years ago

#217 - Session Buildout

Pull Request - State: closed - Opened by turner almost 5 years ago

#216 - Numerous Edits

Pull Request - State: closed - Opened by turner almost 5 years ago

#215 - Misc

Pull Request - State: closed - Opened by turner almost 5 years ago

#214 - Ribbon and noodle rendering

Pull Request - State: closed - Opened by turner almost 5 years ago

#213 - Add browser detection

Pull Request - State: closed - Opened by turner almost 5 years ago

#212 - Generalized file format

Pull Request - State: closed - Opened by turner almost 5 years ago

#211 - Add support for .gz compressed files

Pull Request - State: closed - Opened by turner almost 5 years ago

#210 - bug fix

Pull Request - State: closed - Opened by turner almost 5 years ago

#209 - Now using rollup.js.

Pull Request - State: closed - Opened by turner about 5 years ago

#208 - Use hosted mapMenuData.txt file

Pull Request - State: closed - Opened by turner about 5 years ago

#207 - bug fix. npm updates.

Pull Request - State: closed - Opened by turner about 5 years ago

#206 - Use local copy of mapMenuData.txt. Temp fix for CORS issue at Aiden Labs.

Pull Request - State: closed - Opened by turner about 5 years ago

#205 - Add link to Spacewalk file format.

Pull Request - State: closed - Opened by turner about 5 years ago

GitHub / igvteam/spacewalk issues and pull requests