Ecosyste.ms: Issues

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GitHub / huidongchen/simba issues and pull requests

#17 - Add new tutorial and update CI workflow

Pull Request - State: closed - Opened by huidongchen over 1 year ago

#16 - Update _pbg.py

Pull Request - State: closed - Opened by JunxiFeng over 1 year ago - 1 comment

#15 - Corrected indentation

Pull Request - State: closed - Opened by TranscriptionFactory over 1 year ago

#14 - load_config_simba

Pull Request - State: closed - Opened by TranscriptionFactory over 1 year ago

#13 - Apply SIMBA for small dataset

Issue - State: closed - Opened by hikahika12 over 1 year ago - 2 comments

#12 - Embedding cells and genes for post-training analysis takes a long time

Issue - State: open - Opened by JunxiFeng over 1 year ago - 1 comment

#11 - Visualisation of scATAC-seq's Peak

Issue - State: closed - Opened by Starlitnightly over 1 year ago - 2 comments

#10 - Using SIMBA with partially paired Multiome data

Issue - State: open - Opened by ccruizm over 1 year ago - 1 comment

#9 - Update readthedocs

Pull Request - State: closed - Opened by huidongchen almost 2 years ago

#8 - improve test coverage

Pull Request - State: closed - Opened by huidongchen almost 2 years ago

#7 - Optimize

Pull Request - State: closed - Opened by huidongchen almost 2 years ago

#6 - Fix bugs

Pull Request - State: closed - Opened by huidongchen almost 2 years ago

#5 - update readthedocs

Pull Request - State: closed - Opened by huidongchen almost 2 years ago

#4 - replace conda with mamba

Pull Request - State: closed - Opened by huidongchen almost 2 years ago

#3 - Fix ci

Pull Request - State: closed - Opened by huidongchen almost 2 years ago

#2 - update docs

Pull Request - State: closed - Opened by huidongchen almost 2 years ago

#1 - Introduce edge weights and generalize graph construction

Pull Request - State: closed - Opened by huidongchen almost 2 years ago