hms-dbmi/IRCT issues and pull requests

#111 - Bump jackson-databind from 2.8.9 to 2.12.7.1 in /IRCT-API

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#110 - Bump jackson-databind from 2.8.1 to 2.12.7.1 in /IRCT-EXT

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#109 - Bump jackson-databind from 2.8.1 to 2.13.4.1 in /IRCT-EXT

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#108 - Bump jackson-databind from 2.8.9 to 2.13.4.1 in /IRCT-API

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#107 - Bump jackson-databind from 2.8.1 to 2.12.6.1 in /IRCT-EXT

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#106 - Bump jackson-databind from 2.8.9 to 2.12.6.1 in /IRCT-API

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#105 - Bump poi from 3.12 to 4.1.1

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#104 - Bump poi from 3.12 to 4.1.1 in /IRCT-CL

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#103 - Bump jackson-databind from 2.8.1 to 2.9.10.8 in /IRCT-EXT

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 1 comment
Labels: dependencies

#102 - Bump jackson-databind from 2.8.9 to 2.9.10.8 in /IRCT-API

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 1 comment
Labels: dependencies

#101 - Bump elasticsearch from 2.2.1 to 6.8.17

Pull Request - State: open - Opened by dependabot[bot] about 3 years ago
Labels: dependencies

#100 - Bump elasticsearch from 2.2.1 to 6.8.15

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#99 - Bump httpclient from 4.5.2 to 4.5.13 in /SciDB-Java

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#98 - Bump httpclient from 4.5 to 4.5.13

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#97 - Bump commons-io from 2.5 to 2.7 in /SciDB-Java

Pull Request - State: open - Opened by dependabot[bot] over 3 years ago
Labels: dependencies

#96 - Bump elasticsearch from 2.2.1 to 6.8.13

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#95 - Bump jackson-databind from 2.8.1 to 2.9.10.7 in /IRCT-EXT

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#94 - Bump jackson-databind from 2.8.9 to 2.9.10.7 in /IRCT-API

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#93 - Bump poi from 3.12 to 3.17

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#92 - Bump poi from 3.12 to 3.17 in /IRCT-CL

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#91 - Bump junit from 4.12 to 4.13.1

Pull Request - State: open - Opened by dependabot[bot] almost 4 years ago
Labels: dependencies

#90 - Bump jackson-databind from 2.8.1 to 2.9.10.4 in /IRCT-EXT

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#89 - Bump jackson-databind from 2.8.9 to 2.9.10.4 in /IRCT-API

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#88 - Bump jackson-databind from 2.8.1 to 2.9.10.3 in /IRCT-EXT

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#87 - Bump jackson-databind from 2.8.1 to 2.9.10.1 in /IRCT-EXT

Pull Request - State: closed - Opened by dependabot[bot] almost 5 years ago - 1 comment
Labels: dependencies

#86 - Bump jackson-databind from 2.8.9 to 2.9.10.1 in /IRCT-API

Pull Request - State: closed - Opened by dependabot[bot] almost 5 years ago - 1 comment
Labels: dependencies

#85 - Rejuvenate log levels

Pull Request - State: open - Opened by yiming-tang-cs almost 5 years ago

#84 - Picsure 260 patient mapping performance

Pull Request - State: closed - Opened by YuAvillachLab over 5 years ago

#83 - Rejuvenate log levels using another set of settings

Pull Request - State: closed - Opened by yiming-tang-cs over 5 years ago

#82 - Rejuvenate log levels

Pull Request - State: closed - Opened by yiming-tang-cs over 5 years ago - 1 comment

#81 - added openapi.yaml updates

Pull Request - State: closed - Opened by dtraviglia over 5 years ago

#80 - Typo fix and add synchronized to userEnsure method

Pull Request - State: closed - Opened by ghost almost 6 years ago

#79 - Hail via Livy on PIC-SURE

Pull Request - State: open - Opened by DeniseKersjes about 6 years ago

#78 - Fixed token intro problem

Pull Request - State: closed - Opened by YuAvillachLab about 6 years ago

#77 - Bugfix: Take out the urlencoder.encode which causes %2F

Pull Request - State: closed - Opened by YuAvillachLab about 6 years ago

#76 - null pointer fixed in ResourceService find endpoint

Pull Request - State: closed - Opened by YuAvillachLab about 6 years ago

#75 - minor improvement

Pull Request - State: closed - Opened by YuAvillachLab about 6 years ago

#74 - Picsure 168 resultsetid

Pull Request - State: closed - Opened by calypsomatic about 6 years ago - 1 comment

#73 - RS256 signature support; CORS support; i2b2 jwt support

Pull Request - State: open - Opened by mickmis about 6 years ago

#72 - I2b2tm 73

Pull Request - State: closed - Opened by recursethis about 6 years ago

#71 - Picsure 145 - to expose metadataxml in ConceptType for path, find, jsonPath three endpoint

Pull Request - State: closed - Opened by YuAvillachLab about 6 years ago - 1 comment

#70 - standalone.xml configurable updates

Pull Request - State: closed - Opened by recursethis about 6 years ago

#69 - Picsure 124

Pull Request - State: closed - Opened by YuAvillachLab about 6 years ago - 2 comments

#68 - picsure 123 use closeable http client in token introspection

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#67 - picsure 67 make client secret optional based on if it is in sessionFilter mode or not

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#66 - Picsure 67 token introspection related

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#65 - picsure 67 minor changes - logs and error handling for tokenIntrospection

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#64 - Picsure 79 gnomeri should be able to make subsets

Pull Request - State: closed - Opened by ghost over 6 years ago

#63 - Picsure 16 patient mapping data

Pull Request - State: closed - Opened by calypsomatic over 6 years ago

#62 - PICSURE-66 do not require token inspection variables, default to sess…

Pull Request - State: closed - Opened by calypsomatic over 6 years ago

#61 - picsure-74 support gNome query api

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#61 - picsure-74 support gNome query api

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#60 - Feature/picsure 55 extract i2b2 count only out as a separater ri

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#59 - PICSURE-61 call token introspection endpoint for authorization if con…

Pull Request - State: closed - Opened by calypsomatic over 6 years ago

#58 - picsure-56 fixed NOT functionality, and a NullPointerException bug in QueryService

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#57 - Feature/picsure 41 add paging into i2b2 ri

Pull Request - State: closed - Opened by calypsomatic over 6 years ago - 4 comments

#56 - Added Gradle build

Pull Request - State: closed - Opened by burtbeckwith over 6 years ago - 1 comment

#55 - picsure-27 fixed 1. valid user come with a new token; 2. first time login with a valid token won't go through IRCT 1.x

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#54 - DI-941/picsure-18 took care of multiple concepts with the same code issue. Detected and took care of valueType is @

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#53 - Feature/di 941 fixing i2b2 return data

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#52 - Feature/di 941 fixing i2b2 return data

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#51 - picsure-18 token column size changed to 8192 by modifying the hiberna…

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#50 - Di 1027 create hailsql

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#49 - DI-1074 fixed the bug

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#48 - i2b2 querystatus response handling

Pull Request - State: closed - Opened by ghost over 6 years ago - 1 comment

#47 - Di 1036 hail resource interface

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#46 - DI-1036 improving the performance of parsing data

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#45 - DI-1061 filter entities from find to match requested path, check for nulls

Pull Request - State: closed - Opened by calypsomatic over 6 years ago - 1 comment

#44 - DI-1067 bug fix: ignoreCertificate should not affect http connection

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#43 - DI-1064 update to ExceptionMapper

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#42 - DI-1068 set blob to true

Pull Request - State: closed - Opened by calypsomatic over 6 years ago

#41 - Di 1064 try catch block improve in resource service

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#40 - NULL value returned for the comment field

Issue - State: closed - Opened by sahusandeep over 6 years ago - 1 comment

#39 - DI-1064 Fixed all exception handle in IRCT-CL and cleaned some code i…

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#38 - DI-1063 gNome path bug fixed

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#37 - DI-1062 replaced

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#36 - Di 1056 user field

Pull Request - State: closed - Opened by calypsomatic over 6 years ago

#35 - DI-994 whitelist functionality: add instruction into README file in CL

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#35 - DI-994 whitelist functionality: add instruction into README file in CL

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#34 - Feature/di 1041 patient i2b2 count query functionality

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#33 - DI-1043 made the CloseableHttpClient global in IRCTApplication.java, …

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#32 - DI-1040 Add path_json method to accept list of json objects for paths

Pull Request - State: closed - Opened by calypsomatic over 6 years ago - 1 comment

#31 - DI-778 sql bug fix

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#30 - DI-778 modify the mechanism of token retrieval from GNome

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#29 - DI-1027 Hail RI configuration

Pull Request - State: closed - Opened by ghost over 6 years ago

#28 - Feature/di 778 g nome integration as a resource

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#27 - DI-1023 change the logic of how to implement applicationError, riErro…

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#26 - DI-1023 improved IRCTResponseError, and IRCTResponse to clarify the s…

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#25 - DI-1023 initial response function creation

Pull Request - State: closed - Opened by YuAvillachLab over 6 years ago

#24 - Refresh PASSTHROUGH branch from master

Pull Request - State: closed - Opened by ghost over 6 years ago - 1 comment

#23 - Bugs/di 1007 fix bugs in master branch

Pull Request - State: closed - Opened by YuAvillachLab almost 7 years ago

#22 - Di 1006

Pull Request - State: closed - Opened by namdets almost 7 years ago - 2 comments

#21 - DI-1007 fix master branch broken

Pull Request - State: closed - Opened by YuAvillachLab almost 7 years ago

#20 - Merge master into stable

Pull Request - State: closed - Opened by ghost almost 7 years ago

#19 - DI-994 add final to the naming utility class

Pull Request - State: closed - Opened by YuAvillachLab almost 7 years ago

#18 - DI-994 bug fixed and made the JNDI configuration in standalone.xml no…

Pull Request - State: closed - Opened by YuAvillachLab almost 7 years ago - 1 comment

#17 - DI-994 initial code changes for whitelist functionality

Pull Request - State: closed - Opened by YuAvillachLab almost 7 years ago - 1 comment

#16 - Di 968 db liquibase for schema change

Pull Request - State: open - Opened by YuAvillachLab almost 7 years ago - 1 comment

#15 - Di 968 db schema improve

Pull Request - State: closed - Opened by YuAvillachLab almost 7 years ago

#14 - Add extra criteria, so only TREE resources get loaded

Pull Request - State: closed - Opened by ghost almost 7 years ago

GitHub / hms-dbmi/IRCT issues and pull requests