hkmztrk/deepdta issues and pull requests

#47 - when use DeepDTA error

Issue - State: open - Opened by Golden-proteogenomics 5 months ago

#47 - when use DeepDTA error

Issue - State: open - Opened by Golden-proteogenomics 5 months ago

#46 - Issue regarding the datasets

Issue - State: closed - Opened by matija-marijan 5 months ago - 3 comments

#46 - Issue regarding the datasets

Issue - State: closed - Opened by matija-marijan 5 months ago - 3 comments

#45 - Install tensorflow=1.x needs python>=3.5

Issue - State: closed - Opened by DENGBOYU-REX 5 months ago - 1 comment

#45 - Install tensorflow=1.x needs python>=3.5

Issue - State: closed - Opened by DENGBOYU-REX 5 months ago - 1 comment

#44 - A question about Davis dataset

Issue - State: closed - Opened by realwangjiahao 8 months ago - 1 comment

#44 - A question about Davis dataset

Issue - State: closed - Opened by realwangjiahao 8 months ago - 1 comment

#43 - Regarding data leakage caused by amino acid sequences in the data set

Issue - State: closed - Opened by kkkayle 10 months ago - 1 comment

#43 - Regarding data leakage caused by amino acid sequences in the data set

Issue - State: closed - Opened by kkkayle 10 months ago - 1 comment

#42 - Fix reference to KIBA dataset in README.md

Pull Request - State: open - Opened by jyaacoub about 1 year ago

#42 - Fix reference to KIBA dataset in README.md

Pull Request - State: open - Opened by jyaacoub about 1 year ago

#41 - During implementation on my own dataset, I got weird results

Issue - State: open - Opened by DBpackage over 1 year ago - 4 comments

#41 - During implementation on my own dataset, I got weird results

Issue - State: open - Opened by DBpackage over 1 year ago - 4 comments

#40 - First commit

Pull Request - State: closed - Opened by Anas321 over 1 year ago

#40 - First commit

Pull Request - State: closed - Opened by Anas321 over 1 year ago

#39 - Question about implementation

Issue - State: closed - Opened by hanulpark98 over 1 year ago - 4 comments

#39 - Question about implementation

Issue - State: closed - Opened by hanulpark98 over 1 year ago - 4 comments

#38 - added environment file and changed description from readme accordingly

Pull Request - State: open - Opened by marvinvanaalst over 1 year ago - 1 comment

#38 - added environment file and changed description from readme accordingly

Pull Request - State: open - Opened by marvinvanaalst over 1 year ago - 1 comment

#37 - Help with installation

Issue - State: closed - Opened by lindachiap over 1 year ago - 3 comments

#37 - Help with installation

Issue - State: closed - Opened by lindachiap over 1 year ago - 3 comments

#36 - I have some questions, can you help me！！！

Issue - State: closed - Opened by Sentence99 over 1 year ago - 1 comment

#36 - I have some questions, can you help me！！！

Issue - State: closed - Opened by Sentence99 over 1 year ago - 1 comment

#35 - Reimplementation of DeepDTA with Pytorch

Issue - State: open - Opened by KSUN63 over 1 year ago - 2 comments

#35 - Reimplementation of DeepDTA with Pytorch

Issue - State: open - Opened by KSUN63 over 1 year ago - 2 comments

#34 - new datas

Issue - State: closed - Opened by kiki-win over 1 year ago - 9 comments

#34 - new datas

Issue - State: closed - Opened by kiki-win over 1 year ago - 9 comments

#33 - Help with retraining the combined model with a different dataset

Issue - State: closed - Opened by KSUN63 over 1 year ago - 2 comments

#33 - Help with retraining the combined model with a different dataset

Issue - State: closed - Opened by KSUN63 over 1 year ago - 2 comments

#32 - Could the pre-trained model be made available?

Issue - State: closed - Opened by cwognum almost 2 years ago - 2 comments

#32 - Could the pre-trained model be made available?

Issue - State: closed - Opened by cwognum almost 2 years ago - 2 comments

#31 - some questions

Issue - State: closed - Opened by kiki-win over 2 years ago - 1 comment

#31 - some questions

Issue - State: closed - Opened by kiki-win over 2 years ago - 1 comment

#30 - MSE for davis dataset is very high than that is mentioned in the paper

Issue - State: closed - Opened by ashu-jbnu over 2 years ago - 5 comments

#30 - MSE for davis dataset is very high than that is mentioned in the paper

Issue - State: closed - Opened by ashu-jbnu over 2 years ago - 5 comments

#29 - Question about KIBA score

Issue - State: closed - Opened by baehaeli almost 3 years ago - 4 comments

#29 - Question about KIBA score

Issue - State: closed - Opened by baehaeli almost 3 years ago - 4 comments

#28 - the question about the two datasets.

Issue - State: closed - Opened by Wenjian-Ma almost 3 years ago - 2 comments

#28 - the question about the two datasets.

Issue - State: closed - Opened by Wenjian-Ma almost 3 years ago - 2 comments

#27 - Running "S-W and Pubchem-Sim" case from DeepDTA

Issue - State: closed - Opened by SAkbari93 almost 4 years ago - 3 comments

#27 - Running "S-W and Pubchem-Sim" case from DeepDTA

Issue - State: closed - Opened by SAkbari93 almost 4 years ago - 3 comments

#26 - Complete Code

Issue - State: closed - Opened by fatima711 almost 4 years ago - 1 comment

#26 - Complete Code

Issue - State: closed - Opened by fatima711 almost 4 years ago - 1 comment

#25 - Prediction of binding affinity using DeepDTA interpretation

Issue - State: closed - Opened by lmlmmma almost 4 years ago - 3 comments

#25 - Prediction of binding affinity using DeepDTA interpretation

Issue - State: closed - Opened by lmlmmma almost 4 years ago - 3 comments

#24 - How can I obtain Pickel file Y for my own ligands and protien datasets ?

Issue - State: closed - Opened by shrimonmuke0202 almost 4 years ago - 1 comment

#24 - How can I obtain Pickel file Y for my own ligands and protien datasets ?

Issue - State: closed - Opened by shrimonmuke0202 almost 4 years ago - 1 comment

#23 - The meaning of name for ligands

Issue - State: closed - Opened by pykao about 4 years ago - 1 comment

#23 - The meaning of name for ligands

Issue - State: closed - Opened by pykao about 4 years ago - 1 comment

#22 - version of python

Issue - State: closed - Opened by pykao about 4 years ago - 1 comment

#22 - version of python

Issue - State: closed - Opened by pykao about 4 years ago - 1 comment

#21 - error message when I ran /DeepDTA/deepdta-toy/run_experiments.py

Issue - State: closed - Opened by xuzhang5788 over 4 years ago - 8 comments

#21 - error message when I ran /DeepDTA/deepdta-toy/run_experiments.py

Issue - State: closed - Opened by xuzhang5788 over 4 years ago - 8 comments

#20 - model save and load

Issue - State: closed - Opened by cgh2797 over 4 years ago - 2 comments

#20 - model save and load

Issue - State: closed - Opened by cgh2797 over 4 years ago - 2 comments

#19 - arguments.py err

Issue - State: closed - Opened by cgh2797 over 4 years ago - 1 comment

#19 - arguments.py err

Issue - State: closed - Opened by cgh2797 over 4 years ago - 1 comment

#18 - Question about cindex_score function

Issue - State: open - Opened by kyoheikoyama almost 5 years ago - 3 comments

#18 - Question about cindex_score function

Issue - State: open - Opened by kyoheikoyama almost 5 years ago - 3 comments

#17 - How to open Y correctly?

Issue - State: closed - Opened by ZhongYueer almost 5 years ago - 3 comments

#17 - How to open Y correctly?

Issue - State: closed - Opened by ZhongYueer almost 5 years ago - 3 comments

#16 - Filter length

Issue - State: closed - Opened by garcia-nacho about 5 years ago - 1 comment

#16 - Filter length

Issue - State: closed - Opened by garcia-nacho about 5 years ago - 1 comment

#15 - Adding prediction code?

Issue - State: closed - Opened by zhouhao-learning about 5 years ago - 1 comment

#15 - Adding prediction code?

Issue - State: closed - Opened by zhouhao-learning about 5 years ago - 1 comment

#14 - bestparamind is not defined in run_experiments.py

Issue - State: closed - Opened by sathyapatel over 5 years ago - 2 comments

#14 - bestparamind is not defined in run_experiments.py

Issue - State: closed - Opened by sathyapatel over 5 years ago - 2 comments

#13 - Whether to consider the use of protein 3D structure to predict affinity

Issue - State: closed - Opened by zhouhao-learning over 5 years ago - 3 comments

#13 - Whether to consider the use of protein 3D structure to predict affinity

Issue - State: closed - Opened by zhouhao-learning over 5 years ago - 3 comments

#12 - About Confidence and interval and p value

Issue - State: closed - Opened by Gvinkc over 5 years ago - 2 comments

#12 - About Confidence and interval and p value

Issue - State: closed - Opened by Gvinkc over 5 years ago - 2 comments

#11 - setting up number of training for experiments

Issue - State: closed - Opened by HiPracheta over 5 years ago - 7 comments

#11 - setting up number of training for experiments

Issue - State: closed - Opened by HiPracheta over 5 years ago - 7 comments

#10 - what does Y represent in your deepDTA toy data?

Issue - State: closed - Opened by HiPracheta over 5 years ago - 3 comments

#10 - what does Y represent in your deepDTA toy data?

Issue - State: closed - Opened by HiPracheta over 5 years ago - 3 comments

#9 - Some questions about metrics

Issue - State: closed - Opened by OilW over 5 years ago - 3 comments

#8 - DeepDTA: deep drug–target binding affinity prediction

Issue - State: closed - Opened by huiwenwangjn over 5 years ago - 12 comments

#7 - What is the use of two similarity files in the data?

Issue - State: closed - Opened by zhouhao-learning over 5 years ago - 8 comments

GitHub / hkmztrk/deepdta issues and pull requests