Ecosyste.ms: Issues

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GitHub / hammerlab/hlarp issues and pull requests

#28 - Diploid format

Issue - State: open - Opened by rleonid over 7 years ago

#27 - Reform compare argument parsing

Pull Request - State: closed - Opened by rleonid about 8 years ago - 2 comments

#26 - Parse seq2 hla ambiguity

Pull Request - State: closed - Opened by rleonid about 8 years ago - 2 comments

#25 - Error when reading seq2HLA output containing bad characters

Issue - State: closed - Opened by jburos about 8 years ago - 3 comments

#24 - Use hlarp to compare HLA type from different samples

Issue - State: open - Opened by jburos about 8 years ago - 5 comments

#23 - Change the compare command line format

Issue - State: open - Opened by rleonid over 8 years ago

#22 - Kl div

Pull Request - State: closed - Opened by rleonid over 8 years ago

#21 - Split the library into a pack.

Pull Request - State: closed - Opened by rleonid over 8 years ago

#20 - Seq2HLA NaN confidence values are correctly parsed

Pull Request - State: closed - Opened by ihodes over 8 years ago - 1 comment

#19 - New hlarp release for opam

Issue - State: closed - Opened by ihodes over 8 years ago - 1 comment

#18 - Add prohlatype

Pull Request - State: closed - Opened by rleonid over 8 years ago - 1 comment

#18 - Add prohlatype

Pull Request - State: closed - Opened by rleonid over 8 years ago - 1 comment

#17 - Add basic support for taking Hlarp aggregate files ...

Pull Request - State: closed - Opened by rleonid over 8 years ago

#16 - Document hlarps new capabilities

Pull Request - State: closed - Opened by rleonid over 8 years ago - 1 comment

#15 - Implement by loci comparison.

Pull Request - State: closed - Opened by rleonid over 8 years ago - 1 comment

#14 - Add comparison features

Pull Request - State: closed - Opened by rleonid almost 9 years ago - 2 comments

#13 - Set up opam install

Pull Request - State: closed - Opened by ihodes almost 9 years ago - 1 comment

#12 - Add most likely pair filtering for ATHLATES output

Pull Request - State: closed - Opened by rleonid almost 9 years ago

#11 - First charater should be D,ie 0th index.

Pull Request - State: closed - Opened by rleonid almost 9 years ago

#10 - Make the directory argument required

Pull Request - State: closed - Opened by rleonid almost 9 years ago

#9 - Add athlates

Pull Request - State: closed - Opened by rleonid almost 9 years ago

#8 - Update readme

Pull Request - State: closed - Opened by ihodes almost 9 years ago

#7 - Clarify pronunciation of hlarp

Issue - State: closed - Opened by ihodes almost 9 years ago - 6 comments

#6 - hlarp crashes when confidence is NA

Issue - State: closed - Opened by ihodes almost 9 years ago
Labels: bug

#5 - Name library and CLI properly

Pull Request - State: closed - Opened by ihodes almost 9 years ago

#4 - Split out pure so hlarp can be used as a library

Pull Request - State: closed - Opened by ihodes almost 9 years ago - 2 comments

#3 - Typo fixes

Pull Request - State: closed - Opened by ihodes almost 9 years ago

#2 - Add to biopam/bioconda

Issue - State: closed - Opened by ihodes almost 9 years ago - 6 comments

#1 - Add basic OptiType parsing.

Pull Request - State: closed - Opened by rleonid almost 9 years ago