hammerlab/cycledash issues and pull requests

#100 - Update POST data info in docs/format

Pull Request - State: closed - Opened by ihodes over 10 years ago

#100 - Update POST data info in docs/format

Pull Request - State: closed - Opened by ihodes over 10 years ago

#99 - Add read-orientation to BioDalliance

Issue - State: closed - Opened by ihodes over 10 years ago - 4 comments
Labels: enhancement, page: /examine

#99 - Add read-orientation to BioDalliance

Issue - State: closed - Opened by ihodes over 10 years ago - 4 comments
Labels: enhancement, page: /examine

#98 - /docs/format possibly out of date

Issue - State: closed - Opened by arahuja over 10 years ago
Labels: bug

#98 - /docs/format possibly out of date

Issue - State: closed - Opened by arahuja over 10 years ago
Labels: bug

#97 - Fix column widths

Issue - State: closed - Opened by hammer over 10 years ago - 1 comment

#97 - Fix column widths

Issue - State: closed - Opened by hammer over 10 years ago - 1 comment

#96 - FIX: Actually remove empty majors

Pull Request - State: closed - Opened by ihodes over 10 years ago

#96 - FIX: Actually remove empty majors

Pull Request - State: closed - Opened by ihodes over 10 years ago

#95 - Remove ANY empty major, not just INFO

Pull Request - State: closed - Opened by ihodes over 10 years ago

#95 - Remove ANY empty major, not just INFO

Pull Request - State: closed - Opened by ihodes over 10 years ago

#94 - Put the truth & run VCFs back next to one another

Pull Request - State: closed - Opened by danvk over 10 years ago

#94 - Put the truth & run VCFs back next to one another

Pull Request - State: closed - Opened by danvk over 10 years ago

#93 - Add a way to annotate variants

Issue - State: closed - Opened by danvk over 10 years ago - 2 comments
Labels: enhancement, page: /examine

#93 - Add a way to annotate variants

Issue - State: closed - Opened by danvk over 10 years ago - 2 comments
Labels: enhancement, page: /examine

#92 - Only request each VCF file once

Issue - State: closed - Opened by danvk over 10 years ago - 1 comment
Labels: enhancement, page: /examine

#92 - Only request each VCF file once

Issue - State: closed - Opened by danvk over 10 years ago - 1 comment
Labels: enhancement, page: /examine

#91 - Add a config setting to log to a file

Pull Request - State: closed - Opened by danvk over 10 years ago - 5 comments

#91 - Add a config setting to log to a file

Pull Request - State: closed - Opened by danvk over 10 years ago - 5 comments

#90 - Issue 32 load without truth vcf

Pull Request - State: closed - Opened by ihodes over 10 years ago - 2 comments

#90 - Issue 32 load without truth vcf

Pull Request - State: closed - Opened by ihodes over 10 years ago - 2 comments

#89 - Better way to filter variants

Issue - State: closed - Opened by ihodes over 10 years ago - 1 comment
Labels: bug, page: /examine

#89 - Better way to filter variants

Issue - State: closed - Opened by ihodes over 10 years ago - 1 comment
Labels: bug, page: /examine

#88 - Show attributes and values for SAMPLE columns

Pull Request - State: closed - Opened by ihodes over 10 years ago - 2 comments

#88 - Show attributes and values for SAMPLE columns

Pull Request - State: closed - Opened by ihodes over 10 years ago - 2 comments

#87 - Add underscore source map

Pull Request - State: closed - Opened by ihodes over 10 years ago - 1 comment

#87 - Add underscore source map

Pull Request - State: closed - Opened by ihodes over 10 years ago - 1 comment

#86 - Add pileup interestingness score

Issue - State: open - Opened by hammer over 10 years ago - 6 comments
Labels: enhancement, page: /examine

#86 - Add pileup interestingness score

Issue - State: open - Opened by hammer over 10 years ago - 6 comments
Labels: enhancement, page: /examine

#85 - Enable sorting of numerical columns

Pull Request - State: closed - Opened by ihodes over 10 years ago - 2 comments

#85 - Enable sorting of numerical columns

Pull Request - State: closed - Opened by ihodes over 10 years ago - 2 comments

#84 - Add prev/next buttons and hotkeys

Pull Request - State: closed - Opened by danvk over 10 years ago - 2 comments

#84 - Add prev/next buttons and hotkeys

Pull Request - State: closed - Opened by danvk over 10 years ago - 2 comments

#83 - Fix "prod" gulp task

Pull Request - State: closed - Opened by danvk over 10 years ago

#83 - Fix "prod" gulp task

Pull Request - State: closed - Opened by danvk over 10 years ago

#82 - Less finicky scrolling with BioDalliance

Pull Request - State: closed - Opened by danvk over 10 years ago - 4 comments

#82 - Less finicky scrolling with BioDalliance

Pull Request - State: closed - Opened by danvk over 10 years ago - 4 comments

#81 - Make igv-httpfs URL configurable

Issue - State: closed - Opened by danvk over 10 years ago - 1 comment
Labels: page: /examine

#81 - Make igv-httpfs URL configurable

Issue - State: closed - Opened by danvk over 10 years ago - 1 comment
Labels: page: /examine

#80 - Embed BioDalliance (merged)

Pull Request - State: closed - Opened by danvk over 10 years ago - 7 comments

#80 - Embed BioDalliance (merged)

Pull Request - State: closed - Opened by danvk over 10 years ago - 7 comments

#79 - Examine Page: Sort records by chromosome & postion

Pull Request - State: closed - Opened by ihodes over 10 years ago - 2 comments

#79 - Examine Page: Sort records by chromosome & postion

Pull Request - State: closed - Opened by ihodes over 10 years ago - 2 comments

#78 - Embed BioDalliance

Pull Request - State: closed - Opened by danvk over 10 years ago

#78 - Embed BioDalliance

Pull Request - State: closed - Opened by danvk over 10 years ago

#77 - Live reloader crashes on syntax errors

Issue - State: closed - Opened by danvk over 10 years ago
Labels: bug

#77 - Live reloader crashes on syntax errors

Issue - State: closed - Opened by danvk over 10 years ago
Labels: bug

#76 - Add examine button to run table in callers/trends, fixes #66

Pull Request - State: closed - Opened by ihodes over 10 years ago

#76 - Add examine button to run table in callers/trends, fixes #66

Pull Request - State: closed - Opened by ihodes over 10 years ago

#75 - Properly handle setting of DEBUG in config

Pull Request - State: closed - Opened by ihodes over 10 years ago

#75 - Properly handle setting of DEBUG in config

Pull Request - State: closed - Opened by ihodes over 10 years ago

#74 - Get rid of underscore-min.map 404 NOT FOUND error

Issue - State: closed - Opened by danvk over 10 years ago - 1 comment
Labels: bug

#74 - Get rid of underscore-min.map 404 NOT FOUND error

Issue - State: closed - Opened by danvk over 10 years ago - 1 comment
Labels: bug

#73 - Config DEBUG option must default to False

Issue - State: closed - Opened by ihodes over 10 years ago
Labels: bug

#73 - Config DEBUG option must default to False

Issue - State: closed - Opened by ihodes over 10 years ago
Labels: bug

#72 - Adds a variant-type filter

Pull Request - State: closed - Opened by ihodes over 10 years ago - 5 comments

#72 - Adds a variant-type filter

Pull Request - State: closed - Opened by ihodes over 10 years ago - 5 comments

#71 - Request: Make all table sortable

Issue - State: closed - Opened by arahuja over 10 years ago
Labels: enhancement, page: /examine

#71 - Request: Make all table sortable

Issue - State: closed - Opened by arahuja over 10 years ago
Labels: enhancement, page: /examine

#70 - Long ref/alt column messes with table layout

Issue - State: closed - Opened by arahuja over 10 years ago - 1 comment
Labels: enhancement, page: /examine

#70 - Long ref/alt column messes with table layout

Issue - State: closed - Opened by arahuja over 10 years ago - 1 comment
Labels: enhancement, page: /examine

#69 - Quick fix: Add .props

Pull Request - State: closed - Opened by danvk over 10 years ago

#69 - Quick fix: Add .props

Pull Request - State: closed - Opened by danvk over 10 years ago

#68 - Show table rows only as needed

Pull Request - State: closed - Opened by danvk over 10 years ago - 1 comment

#68 - Show table rows only as needed

Pull Request - State: closed - Opened by danvk over 10 years ago - 1 comment

#67 - Show SAMPLE info (similar to how we show INFO info)

Issue - State: closed - Opened by ihodes over 10 years ago
Labels: enhancement, page: /examine

#67 - Show SAMPLE info (similar to how we show INFO info)

Issue - State: closed - Opened by ihodes over 10 years ago
Labels: enhancement, page: /examine

#66 - Add <Examine> buttons to rows in /Trends

Issue - State: closed - Opened by ihodes over 10 years ago
Labels: enhancement, page: /trends

#66 - Add <Examine> buttons to rows in /Trends

Issue - State: closed - Opened by ihodes over 10 years ago
Labels: enhancement, page: /trends

#65 - Color karyogram by the number of variants in region /Examine

Issue - State: closed - Opened by ihodes over 10 years ago
Labels: enhancement, page: /examine

#65 - Color karyogram by the number of variants in region /Examine

Issue - State: closed - Opened by ihodes over 10 years ago
Labels: enhancement, page: /examine

#64 - Mark true positives in the VCFTable /Examine

Issue - State: closed - Opened by ihodes over 10 years ago - 1 comment
Labels: enhancement, page: /examine

#64 - Mark true positives in the VCFTable /Examine

Issue - State: closed - Opened by ihodes over 10 years ago - 1 comment
Labels: enhancement, page: /examine

#63 - Split True/False Positive/Negative table by variant type

Issue - State: closed - Opened by ihodes over 10 years ago - 1 comment
Labels: enhancement, page: /examine

#63 - Split True/False Positive/Negative table by variant type

Issue - State: closed - Opened by ihodes over 10 years ago - 1 comment
Labels: enhancement, page: /examine

#62 - Sort records in table by true position, not lexicographic position /Examine page

Issue - State: closed - Opened by ihodes over 10 years ago - 4 comments
Labels: enhancement, page: /examine

#62 - Sort records in table by true position, not lexicographic position /Examine page

Issue - State: closed - Opened by ihodes over 10 years ago - 4 comments
Labels: enhancement, page: /examine

#61 - Chromosomes should be "in order" in the dropdown menu on /examine

Issue - State: closed - Opened by ihodes over 10 years ago
Labels: enhancement, page: /examine

#61 - Chromosomes should be "in order" in the dropdown menu on /examine

Issue - State: closed - Opened by ihodes over 10 years ago
Labels: enhancement, page: /examine

#60 - Indicate selected attributes in table headers

Pull Request - State: closed - Opened by danvk over 10 years ago - 2 comments

#60 - Indicate selected attributes in table headers

Pull Request - State: closed - Opened by danvk over 10 years ago - 2 comments

#59 - Use idiogrammatik and vcf.js from NPM

Pull Request - State: closed - Opened by ihodes over 10 years ago - 3 comments

#59 - Use idiogrammatik and vcf.js from NPM

Pull Request - State: closed - Opened by ihodes over 10 years ago - 3 comments

#58 - Use NPM versions of vcf.js and idiogrammatik.js

Issue - State: closed - Opened by ihodes over 10 years ago - 1 comment
Labels: enhancement

#58 - Use NPM versions of vcf.js and idiogrammatik.js

Issue - State: closed - Opened by ihodes over 10 years ago - 1 comment
Labels: enhancement

#57 - Sort records for correct true/false positives

Pull Request - State: closed - Opened by ihodes over 10 years ago - 10 comments

#57 - Sort records for correct true/false positives

Pull Request - State: closed - Opened by ihodes over 10 years ago - 10 comments

#56 - Use text-shadow rather than bolding on navigation.

Pull Request - State: closed - Opened by danvk over 10 years ago - 4 comments

#56 - Use text-shadow rather than bolding on navigation.

Pull Request - State: closed - Opened by danvk over 10 years ago - 4 comments

#55 - Change path to dist for loading autobuilt JS, remove old script

Pull Request - State: closed - Opened by ihodes over 10 years ago

#55 - Change path to dist for loading autobuilt JS, remove old script

Pull Request - State: closed - Opened by ihodes over 10 years ago

#54 - Make the development environment for JS awesome

Pull Request - State: closed - Opened by ihodes over 10 years ago - 2 comments

#54 - Make the development environment for JS awesome

Pull Request - State: closed - Opened by ihodes over 10 years ago - 2 comments

#53 - Turn on ES6/Harmony preprocessing

Issue - State: closed - Opened by danvk over 10 years ago - 1 comment
Labels: enhancement

#53 - Turn on ES6/Harmony preprocessing

Issue - State: closed - Opened by danvk over 10 years ago - 1 comment
Labels: enhancement

#52 - Add a loading indicator to the Examine page

Pull Request - State: closed - Opened by danvk over 10 years ago - 4 comments

#52 - Add a loading indicator to the Examine page

Pull Request - State: closed - Opened by danvk over 10 years ago - 4 comments

#51 - Add a development mode

Issue - State: closed - Opened by danvk over 10 years ago - 6 comments
Labels: enhancement

#51 - Add a development mode

Issue - State: closed - Opened by danvk over 10 years ago - 6 comments
Labels: enhancement

GitHub / hammerlab/cycledash issues and pull requests