Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / haessar/peaks2utr issues and pull requests
#38 - Update README.md
Pull Request -
State: closed - Opened by haessar 2 months ago
#37 - Unexpected antisense overlap and a question on extension
Issue -
State: open - Opened by jkniehaus 3 months ago
- 1 comment
#36 - Fix broken test case1
Issue -
State: open - Opened by haessar 4 months ago
- 1 comment
#35 - Disable overlapping of UTRs with features on other strand
Pull Request -
State: closed - Opened by haessar 4 months ago
#34 - Ensure ncRNA are reintegrated into output
Pull Request -
State: closed - Opened by haessar 4 months ago
#33 - Better parsing of output files and bug fixing
Pull Request -
State: closed - Opened by haessar 4 months ago
#32 - Use transcript instead of exon in criteria that involve "next gene"
Pull Request -
State: closed - Opened by haessar 4 months ago
#31 - Pseudogene annotation
Pull Request -
State: closed - Opened by haessar 5 months ago
#30 - Improved input file validation
Pull Request -
State: closed - Opened by haessar about 1 year ago
#29 - macOS compatibility
Pull Request -
State: closed - Opened by haessar about 1 year ago
#28 - Allow multiple BAM files as input
Pull Request -
State: open - Opened by haessar about 1 year ago
#27 - Validate compatibility of GFF and BAM input files
Pull Request -
State: closed - Opened by haessar about 1 year ago
#26 - 'colour' variable added to GTF files
Issue -
State: closed - Opened by alishamay1305 about 1 year ago
- 2 comments
#25 - Validation of matching seqids
Issue -
State: closed - Opened by haessar about 1 year ago
#24 - OSError: [Errno 39] Directory not empty: '/path/to/.cache'
Issue -
State: closed - Opened by AnnaAMonaco over 1 year ago
- 8 comments
#23 - What is the default for the option '--max-distance'?
Issue -
State: closed - Opened by Squalomix over 1 year ago
- 3 comments
#22 - sqlite3.IntegrityError
Issue -
State: closed - Opened by adoptbai over 1 year ago
- 2 comments
#21 - Use of bam file generated from Bulk RNA-seq alignment
Issue -
State: closed - Opened by oneito over 1 year ago
- 1 comment
#20 - Error in trying to run Demo
Issue -
State: closed - Opened by oneito over 1 year ago
- 4 comments
#19 - Fix 0 based 1 based
Pull Request -
State: closed - Opened by lldelisle over 1 year ago
- 7 comments
#18 - ValueError: Duplicate ID
Issue -
State: closed - Opened by JHCCoder over 1 year ago
- 6 comments
#17 - Update criteria for test cases
Pull Request -
State: closed - Opened by haessar over 1 year ago
- 1 comment
#16 - ERROR - abnormal 3' UTR
Issue -
State: closed - Opened by lldelisle almost 2 years ago
- 2 comments
#15 - Questions about three_prime_utr annotation behavior
Issue -
State: closed - Opened by JHCCoder almost 2 years ago
- 1 comment
#14 - Error "[E::idx_find_and_load] Could not retrieve index file
Issue -
State: closed - Opened by JHCCoder almost 2 years ago
- 2 comments
#13 - Feature gtf output new
Pull Request -
State: closed - Opened by haessar almost 2 years ago
- 1 comment
#12 - IndexError: list index out of range
Issue -
State: closed - Opened by JHCCoder almost 2 years ago
- 4 comments
#11 - Bespoke classes for SPAT truncation points and zero coverage intervals
Pull Request -
State: closed - Opened by haessar almost 2 years ago
#10 - Fix Too many files open error
Pull Request -
State: closed - Opened by haessar almost 2 years ago
#9 - Too many files open error
Issue -
State: closed - Opened by abs-yy almost 2 years ago
- 14 comments
#8 - Fix python to 3.10
Pull Request -
State: closed - Opened by haessar almost 2 years ago
#7 - Feature gtf output
Pull Request -
State: closed - Opened by haessar almost 2 years ago
- 2 comments
#6 - MACS2 -> MACS3
Pull Request -
State: closed - Opened by haessar almost 2 years ago
#5 - Recommended way to convert output GFF file back to GTF?
Issue -
State: closed - Opened by jpiggod about 2 years ago
- 2 comments
#4 - Update genome annotation file with multiple samples?
Issue -
State: open - Opened by jpiggod about 2 years ago
- 1 comment
#3 - Warning message: Genometools binary can't be called
Issue -
State: closed - Opened by jpiggod about 2 years ago
- 2 comments
#2 - Example run failure
Issue -
State: closed - Opened by jpiggod about 2 years ago
- 5 comments
#1 - Installation failure with Python 3.10
Issue -
State: closed - Opened by jpiggod about 2 years ago
- 4 comments