grimmlab/easyPheno issues and pull requests

#214 - Guidance Needed: Running easyPheno with PLINK Data Instead of CSV

Issue - State: closed - Opened by jeong2624 9 months ago - 1 comment

#213 - Update tut_adv_add_new.rst

Pull Request - State: closed - Opened by fhaselbeck almost 2 years ago

#212 - docs update

Pull Request - State: closed - Opened by fhaselbeck almost 2 years ago

#211 - Maura

Pull Request - State: closed - Opened by MauraJohn almost 2 years ago

#210 - docs update

Pull Request - State: closed - Opened by fhaselbeck almost 2 years ago

#209 - docs update

Pull Request - State: closed - Opened by fhaselbeck almost 2 years ago

#208 - docs update

Pull Request - State: closed - Opened by fhaselbeck almost 2 years ago

#207 - docs update

Pull Request - State: closed - Opened by fhaselbeck almost 2 years ago

#206 - docs update

Pull Request - State: closed - Opened by fhaselbeck almost 2 years ago

#205 - Maura

Pull Request - State: closed - Opened by MauraJohn almost 2 years ago

#204 - Maura

Pull Request - State: closed - Opened by MauraJohn almost 2 years ago

#203 - docs update

Pull Request - State: closed - Opened by fhaselbeck almost 2 years ago

#202 - name update ipynb

Pull Request - State: closed - Opened by fhaselbeck almost 2 years ago

#201 - Create LICENSE

Pull Request - State: closed - Opened by fhaselbeck almost 2 years ago

#200 - Florian

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#199 - Florian

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#198 - tutorial update

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#197 - Florian

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#196 - jupyter nb

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#195 - Florian

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#194 - Maura

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#193 - Florian

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#192 - update req txt

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#191 - Florian

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#190 - print number of models for results summary

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#189 - rerun inference

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#188 - rerun inference

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#187 - rerun inference

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#186 - rerun inference

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#185 - rerun inference

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#184 - only run one outerfold

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#183 - bayes featimp bug

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#182 - Maura

Pull Request - State: closed - Opened by MauraJohn about 2 years ago

#181 - tf memory grwoth

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#180 - fix temp path bug

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#179 - fix temp path bug

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#178 - add sanity check for data splits

Pull Request - State: closed - Opened by MauraJohn about 2 years ago

#177 - Maura

Pull Request - State: closed - Opened by MauraJohn about 2 years ago

#176 - Maura

Pull Request - State: closed - Opened by MauraJohn about 2 years ago

#175 - Maura

Pull Request - State: closed - Opened by MauraJohn about 2 years ago

#174 - docker file update

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#173 - restructure stuff for pip workflow

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#172 - Florian

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#171 - Maura

Pull Request - State: closed - Opened by MauraJohn about 2 years ago

#170 - Maura

Pull Request - State: closed - Opened by MauraJohn about 2 years ago

#169 - postprocessing files after debugging

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#168 - save as bytes snp ids

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#167 - save filtered snp ids

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#166 - Maura

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#165 - Florian

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#164 - docs changes due to resub phenotype pred

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#163 - docs changes due to resub phenotype pred

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#162 - docs changes due to resub phenotype pred

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#161 - docs changes due to resub phenotype pred

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#160 - docs changes due to resub phenotype pred

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#159 - docs changes due to resub phenotype pred

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#158 - docs changes due to resub phenotype pred

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#157 - docs changes due to resub phenotype pred

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#156 - Florian

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#155 - Florian

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#154 - Maura

Pull Request - State: closed - Opened by MauraJohn about 2 years ago

#153 - update structure

Pull Request - State: closed - Opened by fhaselbeck about 2 years ago

#152 - generate feat imp updated

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#151 - generate feat imp updated

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#150 - generate feat imp updated

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#149 - generate feat imp updated

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#148 - Maura

Pull Request - State: closed - Opened by MauraJohn over 2 years ago

#147 - fix blup error feat imp

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#146 - bayesA B C extra files

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#145 - bayesA B C extra files

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#144 - bayesA B C extra files

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#143 - bayes featimp

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#142 - bayes featimp + burnin + niter

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#141 - added R to Dockerfile

Pull Request - State: closed - Opened by MauraJohn over 2 years ago

#140 - Maura

Pull Request - State: closed - Opened by MauraJohn over 2 years ago

#139 - tf update

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#138 - beta feat imps korrigiert

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#137 - tf min delta

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#136 - blup + elasticnet feat imp

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#135 - blup with bounds

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#134 - blup with bounds

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#133 - Maura

Pull Request - State: closed - Opened by MauraJohn over 2 years ago

#132 - Florian

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#131 - blup np.sum, tf torch model l1

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#130 - Maura

Pull Request - State: closed - Opened by MauraJohn over 2 years ago

#129 - l1 reg neural nets

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#128 - svm max iter

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#127 - implemented param_free fitting base model and optimization for it

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#126 - int conversion

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#125 - cnn params updated

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#124 - cnn params updated

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#123 - localcnn params changed

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#122 - localcnn params changed

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#121 - change model loading

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#120 - change model loading

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#119 - sort index corrected

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#118 - maf 0

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#117 - params for simulated data

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#116 - ignore pruned exception

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

#115 - ignore pruned exception

Pull Request - State: closed - Opened by fhaselbeck over 2 years ago

GitHub / grimmlab/easyPheno issues and pull requests