Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / grimbough/rhdf5 issues and pull requests

#150 - Speed of `s3` downloads

Issue - State: open - Opened by bart1 14 days ago

#149 - h5cc -show is not a recognized command

Issue - State: closed - Opened by kevinushey 21 days ago - 2 comments

#148 - wasm / webR compilation planned?

Issue - State: open - Opened by eingemaischt 3 months ago

#147 - Upgrading to HDF5 1.14

Issue - State: open - Opened by rcannood 5 months ago - 1 comment

#146 - installation error

Issue - State: open - Opened by DawnEve 5 months ago - 1 comment

#145 - Replacement method issue with enumeration type

Issue - State: open - Opened by luigidolcetti 6 months ago

#144 - Support for vbz compression

Issue - State: open - Opened by jonah-lc 7 months ago - 2 comments

#142 - Installation failed

Issue - State: open - Opened by timz0605 9 months ago - 1 comment

#141 - Unlimited

Pull Request - State: closed - Opened by grimbough 9 months ago - 1 comment

#140 - Address integer overflow in H5Screate_simple()

Pull Request - State: closed - Opened by hpages 9 months ago - 3 comments

#139 - Error in h5checktype(). H5Identifier not valid.

Issue - State: closed - Opened by TomVuod 10 months ago - 4 comments

#138 - test fails on s390x: 64-bit integer attributes are not read correctly

Issue - State: open - Opened by tillea 10 months ago - 3 comments

#137 - Fix gcc's "format-security" warning

Pull Request - State: closed - Opened by js2264 10 months ago - 1 comment

#136 - Allowing writing of logical attributes

Issue - State: open - Opened by lazappi 12 months ago - 11 comments

#135 - Fixing issues from LTLA

Pull Request - State: closed - Opened by grimbough 12 months ago - 1 comment

#134 - `H5Dread` fails for zero-length 32-bit unsigned integer datasets

Issue - State: closed - Opened by LTLA 12 months ago - 1 comment

#133 - "rhdf5filters.so’ not found when install 'rhdf5' package in R 4.2.2

Issue - State: closed - Opened by muyixu 12 months ago - 3 comments

#132 - `H5Awrite` for strings has premature null termination

Issue - State: closed - Opened by LTLA 12 months ago

#130 - allow custom HDF5 data types in h5createDataset and h5writeDataset

Pull Request - State: open - Opened by ilia-kats about 1 year ago - 2 comments

#129 - Binaries for arm64?

Issue - State: closed - Opened by jemorlanes over 1 year ago - 1 comment

#128 - Compilation fails when the folder containing the renv has a space in its name

Issue - State: closed - Opened by albert180 over 1 year ago - 5 comments

#127 - ERROR: compilation failed for package ‘rhdf5’

Issue - State: closed - Opened by PengZhang1995 over 1 year ago - 6 comments

#126 - h5dump() fails on ONT h5 called with Minknow

Issue - State: closed - Opened by genignored over 1 year ago - 4 comments

#125 - `h5readAttribute()` does not handle attributes of type ENUM

Issue - State: closed - Opened by mtmorgan over 1 year ago - 9 comments

#124 - H5s unlimited

Pull Request - State: closed - Opened by grimbough over 1 year ago

#123 - H5Dset_extent failing on ARM64

Issue - State: closed - Opened by grimbough over 1 year ago - 6 comments

#122 - Some tests fails on PowerPC: [ FAIL 39 | WARN 0 | SKIP 2 | PASS 970 ]

Issue - State: open - Opened by barracuda156 over 1 year ago - 1 comment

#121 - have error message "Missing filters: lzf"

Issue - State: closed - Opened by alex46015 over 1 year ago - 1 comment

#120 - h5read returns data of type "raw" in R

Issue - State: closed - Opened by poglio almost 2 years ago - 1 comment

#119 - List dataset names when `name` is not set in `h5read`

Issue - State: open - Opened by frederikziebell almost 2 years ago
Labels: enhancement, good first issue

#118 - Memory error when trying to read part of H5 file

Issue - State: open - Opened by grimbough almost 2 years ago
Labels: bug

#117 - H5Fopen File accessibility. Unable to open file

Issue - State: open - Opened by ukleiner about 2 years ago - 4 comments

#116 - Memory issue causing R termination

Issue - State: open - Opened by gaolong over 2 years ago - 2 comments

#115 - Ability to copy data from one h5 to another

Issue - State: closed - Opened by jeffmgranja over 2 years ago - 3 comments

#114 - Test

Issue - State: closed - Opened by grimbough over 2 years ago

#113 - Long Unix timestamps are converted to NA by h5read command in rhdf5

Issue - State: closed - Opened by glenncampagna over 2 years ago - 2 comments

#112 - Correctly save fixed-width strings with UTF8 encoding.

Pull Request - State: closed - Opened by LTLA over 2 years ago - 3 comments

#111 - `h5write` truncates UTF-8 strings

Issue - State: closed - Opened by LTLA over 2 years ago - 1 comment

#110 - g++: error: [1]: No such file or directory

Issue - State: closed - Opened by grimbough over 2 years ago - 5 comments

#109 - Undefined symbol: HMAC

Issue - State: closed - Opened by brgew over 2 years ago - 14 comments

#108 - comfuse with compile error 'No such file or directory'

Issue - State: open - Opened by picsaver over 2 years ago - 3 comments

#107 - h5ls doesn't output all of the data in the H5 file

Issue - State: closed - Opened by acope3 over 2 years ago - 4 comments

#106 - Integer being read as raw

Issue - State: closed - Opened by joaocarr almost 3 years ago - 6 comments

#105 - A problem when installing sleuth package related to "rhdf5"

Issue - State: closed - Opened by DreamAtDawn almost 3 years ago - 1 comment

#104 - HDF5 1.12.0 compatibility

Issue - State: open - Opened by kelbstf almost 3 years ago - 2 comments

#103 - h5writeDataset.data.frame function not found

Issue - State: closed - Opened by koustav-pal almost 3 years ago - 1 comment

#102 - Update Github Workflow

Pull Request - State: closed - Opened by grimbough almost 3 years ago

#101 - fix UTF8 string encoding

Pull Request - State: closed - Opened by ilia-kats almost 3 years ago - 8 comments

#98 - Missing exports() breaks dependencies.

Issue - State: closed - Opened by dansmith01 about 3 years ago - 4 comments

#97 - Informative error when chunk size exceeds data size

Issue - State: closed - Opened by ekernf01 about 3 years ago - 2 comments

#96 - implement reading/writing HDF5 object references in attribute

Pull Request - State: closed - Opened by ilia-kats about 3 years ago - 4 comments

#95 - expose file creation properties to R (#94)

Pull Request - State: closed - Opened by ilia-kats about 3 years ago - 1 comment

#94 - large parts of the HDF5 API missing

Issue - State: closed - Opened by ilia-kats about 3 years ago - 1 comment

#93 - Error in H5Fopen(file)

Issue - State: closed - Opened by sunjiahe-hub about 3 years ago - 2 comments

#92 - 64bit integer attributes

Pull Request - State: closed - Opened by grimbough over 3 years ago

#91 - external_filters.h:1:9: error: no macro name given in #define directive

Issue - State: closed - Opened by dbdimitrov over 3 years ago - 9 comments

#90 - Workflow testing

Pull Request - State: closed - Opened by grimbough over 3 years ago

#89 - Missing `@export` on `h5writeAttribute` S3 methods

Issue - State: closed - Opened by LTLA over 3 years ago - 2 comments

#88 - Support variable-length, UTF-8 encoded string datasets.

Pull Request - State: closed - Opened by LTLA over 3 years ago - 2 comments

#87 - Rd2roxygen

Pull Request - State: closed - Opened by grimbough over 3 years ago

#86 - 64bit Integers & HDF5 Attributes

Issue - State: closed - Opened by grimbough over 3 years ago - 1 comment

#85 - Standardise return types

Issue - State: open - Opened by grimbough over 3 years ago
Labels: bug, enhancement

#84 - rhdf5-NA.OK

Issue - State: open - Opened by WanxiangHuang over 3 years ago - 4 comments

#83 - No ability to close new data types

Issue - State: open - Opened by grimbough over 3 years ago
Labels: bug

#82 - h5listIdentifier() does not return linked h5 files

Issue - State: closed - Opened by kjfuller06 over 3 years ago

#81 - installation error on linux: external_filters.h error

Issue - State: closed - Opened by aljabadi over 3 years ago - 1 comment

#80 - Support variable length, UTF-8 encoded scalar strings in attributes.

Pull Request - State: closed - Opened by LTLA over 3 years ago - 6 comments

#79 - Write string attributes as a string

Issue - State: closed - Opened by LTLA almost 4 years ago - 2 comments

#78 - Single data size limit

Issue - State: open - Opened by dipterix almost 4 years ago

#76 - fix Makevars. Rscript should be called with --slave

Pull Request - State: closed - Opened by sanromd almost 4 years ago - 1 comment

#75 - undefined symbol: H5T_NATIVE_INT32_g

Issue - State: closed - Opened by descostesn about 4 years ago - 7 comments

#74 - rhdf5filters needs R 4.0

Issue - State: closed - Opened by gouthamatla about 4 years ago - 1 comment

#73 - Segmentation Fault linked to package loading order

Issue - State: closed - Opened by mblanche about 4 years ago - 4 comments

#72 - Failure to write dataframe with large number of columns.

Issue - State: closed - Opened by mmccarthy404 about 4 years ago - 1 comment

#71 - Read fails with R version 4.0.2

Issue - State: closed - Opened by sophiaschaff about 4 years ago - 6 comments

#70 - rhdf5 on CRAN

Issue - State: closed - Opened by JVAQUEROM about 4 years ago - 2 comments

#69 - Variable lookup within indexing is broken

Issue - State: open - Opened by mschubert over 4 years ago - 1 comment

#68 - Subsetting does not understand drop=FALSE argument

Issue - State: open - Opened by mschubert over 4 years ago

#67 - Addressing segfault issue with h5ls and recursive group references

Pull Request - State: closed - Opened by grimbough over 4 years ago

#66 - Preservation of NA values in logical datatypes

Pull Request - State: closed - Opened by grimbough over 4 years ago

#65 - Added support for storing and retrieving array dimnames.

Pull Request - State: closed - Opened by LTLA over 4 years ago - 8 comments

#64 - Reading ijtiff images

Issue - State: open - Opened by elodiegermani over 4 years ago - 2 comments

#63 - Error creating a dataset with chunks of size 1

Issue - State: open - Opened by grimbough over 4 years ago - 1 comment
Labels: bug

#62 - Writing attributes to a dataset or group

Issue - State: open - Opened by grimbough over 4 years ago
Labels: enhancement

#61 - Warning when storing NA (integer value -2^63 replaced NA)

Issue - State: closed - Opened by jonocarroll over 4 years ago - 4 comments

#60 - Empty strings fail?

Issue - State: closed - Opened by muschellij2 over 4 years ago - 4 comments

#59 - Linking to rhdf5

Issue - State: closed - Opened by dipterix over 4 years ago - 1 comment

#58 - Logical NAs converted to FALSE with recent rhdf5

Issue - State: closed - Opened by hpages over 4 years ago - 9 comments

#57 - Changing default string padding

Pull Request - State: closed - Opened by grimbough over 4 years ago - 2 comments

#56 - install latest version issues

Issue - State: closed - Opened by suminwei2772 over 4 years ago - 3 comments

#55 - Support for writing raw datatype.

Pull Request - State: closed - Opened by rcastelo over 4 years ago - 8 comments

#54 - Incorporating changes require for rtools 4.0

Pull Request - State: closed - Opened by grimbough almost 5 years ago

#53 - UTF-8 file paths and Rtools40

Issue - State: closed - Opened by grimbough almost 5 years ago - 1 comment

#52 - Problems with non-ASCII file paths on Windows

Issue - State: closed - Opened by sda030 almost 5 years ago - 4 comments

#51 - MD5 check sums don't match up

Issue - State: closed - Opened by LTLA almost 5 years ago - 6 comments

#50 - Update h5writeDataFrame.c

Pull Request - State: closed - Opened by jhgronau almost 5 years ago - 4 comments