Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / greenelab/tybalt issues and pull requests

#50 - Push To Master: License

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#49 - Begin merge into master - README and git files

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 1 comment

#49 - Begin merge into master - README and git files

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 1 comment

#48 - Adding emoji to README

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 4 comments

#48 - Adding emoji to README

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 4 comments

#47 - Update pipeline

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#47 - Update pipeline

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#46 - Tybalt init

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#46 - Tybalt init

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#45 - Add HGSC latent space analysis

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#45 - Add HGSC latent space analysis

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#44 - add doi badge to readme

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#44 - add doi badge to readme

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#43 - Update figures

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#43 - Update figures

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#42 - Minor hotfix

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#42 - Minor hotfix

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#41 - Final pipeline initialization

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#41 - Final pipeline initialization

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#40 - Prep for pipeline beginning

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#40 - Prep for pipeline beginning

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#39 - Adding sample activation, gene weights viz, and parameter sweep updates

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#39 - Adding sample activation, gene weights viz, and parameter sweep updates

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#38 - Adding TSNE analysis

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#38 - Adding TSNE analysis

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#37 - Update clinical data and processing

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#37 - Update clinical data and processing

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#36 - Update model 50 epoch

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#36 - Update model 50 epoch

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#35 - Update Distance analysis to TP53

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#35 - Update Distance analysis to TP53

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#34 - Distance analysis

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#34 - Distance analysis

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#33 - Remove center attempt

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#33 - Remove center attempt

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#32 - Add parameter sweep markdown

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#32 - Add parameter sweep markdown

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#31 - add param sweep figures

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#31 - add param sweep figures

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#30 - add pmacs cluster env

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#30 - add pmacs cluster env

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#29 - Update readme

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#29 - Update readme

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#28 - Update notebook to optimal params

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#28 - Update notebook to optimal params

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#27 - Add Kappa to parameter sweep

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#27 - Add Kappa to parameter sweep

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#26 - adding processed data to git lfs

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#26 - adding processed data to git lfs

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#25 - Training example model with test output

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#25 - Training example model with test output

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#24 - logging folder

Issue - State: closed - Opened by gwaybio over 7 years ago - 1 comment
Labels: stale

#24 - logging folder

Issue - State: closed - Opened by gwaybio over 7 years ago - 1 comment
Labels: stale

#23 - Update python path and correct read_table

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#23 - Update python path and correct read_table

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#22 - aupdate path for param_sweep;

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#22 - aupdate path for param_sweep;

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#21 - update paramsweep helper script

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#20 - Paramsweep test

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#19 - update docstring of bsub help

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#18 - Param sweep hotfix

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#17 - write scripts/vae_pancancer.py

Issue - State: closed - Opened by gwaybio over 7 years ago

#16 - parameter sweep logic

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#15 - Parameter Sweep

Issue - State: closed - Opened by gwaybio over 7 years ago

#14 - Updating model to trained VAE

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#13 - Save recon_loss and KL_loss separately to visualize tradeoff

Issue - State: closed - Opened by gwaybio over 7 years ago - 1 comment
Labels: enhancement

#12 - Implement Warmup

Issue - State: closed - Opened by gwaybio over 7 years ago - 1 comment
Labels: enhancement

#11 - Initializing Git LFS

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#10 - fix vae training to save full training history

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#9 - Define conda environment to work in GPU cluster

Issue - State: closed - Opened by gwaybio over 7 years ago

#8 - Bug in Training VAE

Issue - State: closed - Opened by gwaybio over 7 years ago - 1 comment
Labels: bug

#7 - Switch to Git LFS

Issue - State: closed - Opened by gwaybio over 7 years ago - 1 comment
Labels: enhancement

#6 - Update process pipeline

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#5 - Process data update

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#4 - Brainstorm: Improving Model

Issue - State: closed - Opened by gwaybio over 7 years ago - 1 comment
Labels: stale

#3 - Brainstorm: Capabilities

Issue - State: closed - Opened by gwaybio over 7 years ago - 1 comment
Labels: stale

#2 - Fix model

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#1 - Initial merge commit into greenelab `develop` branch

Pull Request - State: closed - Opened by gwaybio over 7 years ago