Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / greenelab/tad_pathways_pipeline issues and pull requests

#35 - Validate tad_pathways config file

Issue - State: open - Opened by gwaybio about 5 years ago

#35 - Validate tad_pathways config file

Issue - State: open - Opened by gwaybio about 5 years ago

#34 - [DEVELOP] Adding TAD class

Pull Request - State: closed - Opened by gwaybio over 5 years ago - 3 comments

#33 - [DEVELOP] Update Custom Example Pipeline

Pull Request - State: closed - Opened by gwaybio about 6 years ago

#32 - Fix Chromosome Patches in build_snp_list.R

Issue - State: open - Opened by gwaybio about 6 years ago

#31 - [DEVELOP] Updating for WebGestaltR 0.3.0

Pull Request - State: closed - Opened by gwaybio about 6 years ago

#30 - [DEVELOP] Adding Simulation Functionality

Pull Request - State: closed - Opened by gwaybio about 6 years ago

#29 - Fixing some command arguments and column names

Pull Request - State: closed - Opened by gwaybio about 6 years ago

#28 - Removing GSEA Analysis

Pull Request - State: closed - Opened by gwaybio about 6 years ago

#27 - Updating WebGestalt Script: Custom Pathway Database and Significance Method

Pull Request - State: closed - Opened by gwaybio about 6 years ago

#26 - [Develop] Update evidence construction for GSEA Results

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#25 - [Develop] Merge fix (try again)

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#24 - Revert "Merge fix"

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#23 - Merge fix

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#22 - [Develop Branch] Adding Pathway Enrichment Analysis

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#21 - [Develop Branch] Syntax and Style Updates

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#20 - Move from WebGestalt to Custom Implementation

Issue - State: open - Opened by gwaybio over 6 years ago - 1 comment

#19 - TAD_pathways

Pull Request - State: open - Opened by Colin-Cheng over 6 years ago

#18 - Add Functionality: Remove HLA TAD and Improve Evidence Summary

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#17 - bug fix x chromosome

Pull Request - State: closed - Opened by gwaybio almost 7 years ago

#16 - Remove Checkpoint from Env

Pull Request - State: closed - Opened by gwaybio almost 7 years ago

#15 - chr missing annotations

Issue - State: closed - Opened by jharenza almost 7 years ago

#14 - Update checkpoint date and ensure biomaRt version

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#13 - checkpoint in "build_snp_list.R"

Issue - State: closed - Opened by TriangularCell over 7 years ago - 3 comments

#12 - Update Documentation

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#11 - Transition to Notebook Style Analyses

Issue - State: open - Opened by gwaybio over 7 years ago
Labels: enhancement

#10 - Update Additional Example Pipelines for WebgestaltR

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#9 - Remove manual WebGestalt Step

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#8 - Update checkpoint time

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#7 - Add group option

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#6 - Move webgestalt steps to webgestaltR

Issue - State: closed - Opened by gwaybio over 7 years ago
Labels: enhancement

#5 - add conda env create in readme

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#4 - Computing and visualizing gene evidence overlap

Pull Request - State: closed - Opened by gwaybio almost 8 years ago - 1 comment

#3 - add DOI badge to README

Pull Request - State: closed - Opened by gwaybio about 8 years ago

#2 - reset merged branches

Pull Request - State: closed - Opened by gwaybio about 8 years ago

#1 - Repository Initialization

Pull Request - State: closed - Opened by gwaybio about 8 years ago