Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / greenelab/pancancer issues and pull requests

#106 - Sample distribution per cancer types?

Issue - State: closed - Opened by AwesomeDeepAI almost 5 years ago - 2 comments

#105 - Cancer type prediction

Issue - State: closed - Opened by rezacsedu about 5 years ago - 5 comments

#104 - download data URL not valid

Issue - State: closed - Opened by z160896 about 5 years ago - 5 comments

#103 - R package issue

Issue - State: open - Opened by juechenyang over 5 years ago - 1 comment

#102 - Corresponding labels (cancer types) associated with pancan_rnaseq_freeze.tsv.gz

Issue - State: closed - Opened by rezacsedu over 5 years ago - 3 comments

#100 - Upgrade Pandas to 0.24

Issue - State: open - Opened by gwaybio almost 6 years ago

#99 - cloning into pancancer... permission denied

Issue - State: closed - Opened by Lucianabarros almost 6 years ago - 1 comment

#98 - First pass at parameterizing script inputs used in tp53_analysis.sh

Pull Request - State: closed - Opened by blankenberg about 6 years ago - 4 comments

#97 - Declare argument type when int or float.

Pull Request - State: closed - Opened by blankenberg about 6 years ago

#96 - add ras genes file

Pull Request - State: closed - Opened by gwaybio about 6 years ago

#95 - can't not find ras_genes.csv in data folder

Issue - State: closed - Opened by 04linsi about 6 years ago - 2 comments

#94 - Fix sample freeze

Pull Request - State: closed - Opened by gwaybio about 6 years ago

#93 - Move pancancer_classifier.py arguments call to utility script

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#92 - Can you explain this classification by using simple code in python

Issue - State: closed - Opened by rajitnair over 6 years ago - 1 comment

#92 - Can you explain this classification by using simple code in python

Issue - State: closed - Opened by rajitnair over 6 years ago - 1 comment

#91 - Add Feature Comparison Data

Pull Request - State: closed - Opened by gwaybio over 6 years ago - 1 comment

#90 - Updating Compressed Feature Comparison Scripts

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#90 - Updating Compressed Feature Comparison Scripts

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#89 - Compression Feature Comparison Data Generation

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#89 - Compression Feature Comparison Data Generation

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#88 - Add documentation for Classifier Results View

Issue - State: open - Opened by gwaybio over 6 years ago

#88 - Add documentation for Classifier Results View

Issue - State: open - Opened by gwaybio over 6 years ago

#87 - Add axis labels to gene phenocopy figures

Issue - State: open - Opened by gwaybio over 6 years ago

#87 - Add axis labels to gene phenocopy figures

Issue - State: open - Opened by gwaybio over 6 years ago

#86 - Update TP53 pipeline analysis

Pull Request - State: closed - Opened by gwaybio over 6 years ago - 3 comments

#86 - Update TP53 pipeline analysis

Pull Request - State: closed - Opened by gwaybio over 6 years ago - 3 comments

#85 - Adding snaptron data for TP53 analysis

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#85 - Adding snaptron data for TP53 analysis

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#84 - Adding Ras Classifier Results

Pull Request - State: closed - Opened by gwaybio over 6 years ago - 2 comments

#84 - Adding Ras Classifier Results

Pull Request - State: closed - Opened by gwaybio over 6 years ago - 2 comments

#83 - Hotfix Adding Cell Line Analysis

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#83 - Hotfix Adding Cell Line Analysis

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#82 - Refactoring Pancancer Ras Analysis

Pull Request - State: closed - Opened by gwaybio over 6 years ago - 1 comment

#82 - Refactoring Pancancer Ras Analysis

Pull Request - State: closed - Opened by gwaybio over 6 years ago - 1 comment

#81 - The normalization method for differential expression

Issue - State: open - Opened by ghost over 6 years ago - 1 comment

#80 - add mutation freeze data

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#80 - add mutation freeze data

Pull Request - State: closed - Opened by gwaybio over 6 years ago

#79 - CCLE RPKM Data

Issue - State: open - Opened by gwaybio over 6 years ago - 1 comment

#78 - Getting access to the project and data

Issue - State: closed - Opened by asmagen over 6 years ago - 6 comments

#78 - Getting access to the project and data

Issue - State: closed - Opened by asmagen over 6 years ago - 6 comments

#77 - Updating Repo

Issue - State: open - Opened by gwaybio almost 7 years ago

#77 - Updating Repo

Issue - State: open - Opened by gwaybio almost 7 years ago

#76 - I cannot unzip the four gz-suffixed files in the data directory

Issue - State: closed - Opened by gaojunhui68 almost 7 years ago - 2 comments

#76 - I cannot unzip the four gz-suffixed files in the data directory

Issue - State: closed - Opened by gaojunhui68 almost 7 years ago - 2 comments

#75 - Add PanCanAtlas Data Download

Pull Request - State: closed - Opened by gwaybio almost 7 years ago

#75 - Add PanCanAtlas Data Download

Pull Request - State: closed - Opened by gwaybio almost 7 years ago

#74 - When will be data availability

Issue - State: closed - Opened by bluesea2017 almost 7 years ago - 6 comments

#74 - When will be data availability

Issue - State: closed - Opened by bluesea2017 almost 7 years ago - 6 comments

#73 - Saving CCLE Ras Classifier Scores

Pull Request - State: closed - Opened by gwaybio almost 7 years ago

#73 - Saving CCLE Ras Classifier Scores

Pull Request - State: closed - Opened by gwaybio almost 7 years ago

#72 - Differentially Expressed Genes Update

Pull Request - State: closed - Opened by gwaybio almost 7 years ago

#72 - Differentially Expressed Genes Update

Pull Request - State: closed - Opened by gwaybio almost 7 years ago

#71 - Update CCLE variants in Response to Reviewers

Pull Request - State: closed - Opened by gwaybio almost 7 years ago

#71 - Update CCLE variants in Response to Reviewers

Pull Request - State: closed - Opened by gwaybio almost 7 years ago

#70 - Update DEG analysis

Pull Request - State: closed - Opened by gwaybio about 7 years ago

#70 - Update DEG analysis

Pull Request - State: closed - Opened by gwaybio about 7 years ago

#69 - Hotfix to co-occurrence plots

Pull Request - State: closed - Opened by gwaybio about 7 years ago

#69 - Hotfix to co-occurrence plots

Pull Request - State: closed - Opened by gwaybio about 7 years ago

#68 - Hotfix reviewer response

Pull Request - State: closed - Opened by gwaybio about 7 years ago

#68 - Hotfix reviewer response

Pull Request - State: closed - Opened by gwaybio about 7 years ago

#67 - Code Updates in Response to Reviewers for Ras paper

Pull Request - State: closed - Opened by gwaybio about 7 years ago

#67 - Code Updates in Response to Reviewers for Ras paper

Pull Request - State: closed - Opened by gwaybio about 7 years ago

#66 - Add CCLE Pharmacology Analysis

Pull Request - State: closed - Opened by gwaybio about 7 years ago - 1 comment

#66 - Add CCLE Pharmacology Analysis

Pull Request - State: closed - Opened by gwaybio about 7 years ago - 1 comment

#65 - increase font size in copy burden legend

Pull Request - State: closed - Opened by gwaybio about 7 years ago

#65 - increase font size in copy burden legend

Pull Request - State: closed - Opened by gwaybio about 7 years ago

#64 - Update TP53 Figures

Pull Request - State: closed - Opened by gwaybio about 7 years ago

#64 - Update TP53 Figures

Pull Request - State: closed - Opened by gwaybio about 7 years ago

#63 - Add notebook to output updated supplementary DDR figures

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#63 - Add notebook to output updated supplementary DDR figures

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#62 - Calculating effect size of variant effect in phenocopying experiment

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#62 - Calculating effect size of variant effect in phenocopying experiment

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#61 - Adding TP53 Phenocopy Analysis

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#61 - Adding TP53 Phenocopy Analysis

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#60 - Add AUROC to comparison plot

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#60 - Add AUROC to comparison plot

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#59 - Add Feature Comparison Analysis (Part II)

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 1 comment

#59 - Add Feature Comparison Analysis (Part II)

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 1 comment

#58 - Updating Feature Comparison (Part IB)

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#58 - Updating Feature Comparison (Part IB)

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#57 - Add Feature Comparison Analysis (Part I)

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 2 comments

#57 - Add Feature Comparison Analysis (Part I)

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 2 comments

#56 - Adding versioned github URLs

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 1 comment

#56 - Adding versioned github URLs

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 1 comment

#55 - add option for using a different y matrix

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 6 comments

#55 - add option for using a different y matrix

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 6 comments

#54 - Update Zendo DOI for Ras Paper Submission

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#54 - Update Zendo DOI for Ras Paper Submission

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#52 - Incorporate Data S5

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#52 - Incorporate Data S5

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#51 - Updating Size of Plot Legend (Figure 4)

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 3 comments

#50 - AUPRC to AUPR

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 2 comments

#50 - AUPRC to AUPR

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 2 comments

#49 - Reorganize Repository Landing Page

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#48 - Add Functional Analysis

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#48 - Add Functional Analysis

Pull Request - State: closed - Opened by gwaybio over 7 years ago

#47 - Add Cell Line Prediction Analysis - Complete Figure 3

Pull Request - State: closed - Opened by gwaybio over 7 years ago - 2 comments