Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / greenelab/deconvolution_pilot issues and pull requests

#28 - Added mapping for hash antibodies to samples

Pull Request - State: closed - Opened by arielah over 1 year ago

#28 - Added mapping for hash antibodies to samples

Pull Request - State: closed - Opened by arielah over 1 year ago

#27 - Can you upload single cell metadata as well?

Issue - State: open - Opened by Chengwei94 over 1 year ago - 1 comment

#27 - Can you upload single cell metadata as well?

Issue - State: open - Opened by Chengwei94 over 1 year ago - 1 comment

#26 - Changes made for revisions

Pull Request - State: closed - Opened by arielah over 1 year ago

#26 - Changes made for revisions

Pull Request - State: closed - Opened by arielah over 1 year ago

#25 - Tidying up

Pull Request - State: closed - Opened by arielah almost 2 years ago

#25 - Tidying up

Pull Request - State: closed - Opened by arielah almost 2 years ago

#24 - Adding in cell type info

Pull Request - State: closed - Opened by arielah almost 2 years ago

#24 - Adding in cell type info

Pull Request - State: closed - Opened by arielah almost 2 years ago

#23 - Add biorxiv link

Pull Request - State: closed - Opened by arielah almost 2 years ago

#23 - Add biorxiv link

Pull Request - State: closed - Opened by arielah almost 2 years ago

#22 - Cleaning up repo and figures

Pull Request - State: closed - Opened by arielah almost 2 years ago

#22 - Cleaning up repo and figures

Pull Request - State: closed - Opened by arielah almost 2 years ago

#21 - Add preprint link when it's ready

Issue - State: closed - Opened by arielah almost 2 years ago

#20 - Getting ready to set repo to public

Pull Request - State: closed - Opened by arielah about 2 years ago

#19 - Prep for making repository public

Pull Request - State: closed - Opened by arielah about 2 years ago

#18 - Switch to new names for bulk data types

Pull Request - State: closed - Opened by arielah about 2 years ago

#17 - Figure generation

Pull Request - State: closed - Opened by arielah about 2 years ago

#16 - Check how demultiplexing affects deconvolution

Pull Request - State: closed - Opened by arielah about 2 years ago

#15 - Switch back to loading SimBu package once bug is resolved

Issue - State: closed - Opened by arielah about 2 years ago

#14 - Running pseudobulk and checking accuracy

Pull Request - State: closed - Opened by arielah about 2 years ago

#13 - Comparing deconvolution methods

Pull Request - State: closed - Opened by arielah about 2 years ago

#12 - Deconv pipeline

Pull Request - State: closed - Opened by arielah about 2 years ago

#11 - More updates to deconvolution pipeline

Pull Request - State: closed - Opened by arielah about 2 years ago

#10 - Snakemake file with first deconvolution methods

Pull Request - State: closed - Opened by arielah about 2 years ago

#9 - Refactor

Pull Request - State: closed - Opened by arielah about 2 years ago

#8 - Added data

Pull Request - State: closed - Opened by arielah over 2 years ago

#7 - Bulk differential expression

Pull Request - State: closed - Opened by arielah over 2 years ago - 1 comment

#6 - Exploratory scripts

Pull Request - State: closed - Opened by arielah over 2 years ago

#5 - First try with a snakemake pipeline

Pull Request - State: closed - Opened by arielah over 2 years ago - 3 comments

#4 - First pass at deconvolution

Pull Request - State: closed - Opened by arielah over 2 years ago

#3 - Expanded scripts for comparing demultiplexing results

Pull Request - State: closed - Opened by arielah over 2 years ago

#2 - Pipeline for genetic demultiplexing

Pull Request - State: closed - Opened by arielah over 2 years ago

#1 - Add in scripts for initial data analysis

Pull Request - State: closed - Opened by arielah over 2 years ago - 1 comment