Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / greenelab/covid19-review issues and pull requests

#1214 - Update rootstock on 2024-01-14

Pull Request - State: closed - Opened by agitter 11 months ago - 4 comments

#1213 - Update project status

Pull Request - State: closed - Opened by agitter 11 months ago - 3 comments

#1212 - Fix diagnostics link.

Pull Request - State: closed - Opened by cbrueffer over 1 year ago

#1210 - ClinicalTrials.gov website updates

Issue - State: open - Opened by agitter over 1 year ago - 8 comments

#1209 - Update vaccines refs

Pull Request - State: closed - Opened by agitter over 1 year ago - 2 comments

#1208 - Update COI for CB.

Pull Request - State: closed - Opened by cbrueffer over 1 year ago - 1 comment

#1207 - New Paper (Diagnostic): Real-world performance of SARS-Cov-2 serology tests in the United States, 2020

Issue - State: open - Opened by agitter over 1 year ago
Labels: New Paper, epidemiology, diagnostic, New Peer-Reviewed Paper

#1206 - Correct PubMed metadata for traditional vaccines manuscript

Issue - State: closed - Opened by agitter over 1 year ago - 2 comments

#1205 - Add published vaccines manuscript to status table

Pull Request - State: closed - Opened by agitter over 1 year ago

#1204 - Test build error with verbose error handling

Pull Request - State: closed - Opened by rando2 almost 2 years ago - 4 comments

#1203 - "Commit" not recognized in build.sh

Issue - State: closed - Opened by rando2 almost 2 years ago - 3 comments

#1202 - Build novel vaccines

Pull Request - State: closed - Opened by rando2 almost 2 years ago - 1 comment

#1201 - Clean up warnings

Pull Request - State: closed - Opened by rando2 almost 2 years ago - 4 comments

#1200 - Final edits to established vaccines

Pull Request - State: closed - Opened by rando2 almost 2 years ago - 9 comments

#1199 - Switch external resources workflow to mambaforge

Pull Request - State: closed - Opened by agitter almost 2 years ago - 3 comments

#1198 - External resources workflow broke on 2023-01-13

Issue - State: closed - Opened by agitter almost 2 years ago

#1197 - Update owiddata-stats.json

Pull Request - State: closed - Opened by agitter almost 2 years ago

#1196 - Fix broken path for gdpscatter figure

Pull Request - State: closed - Opened by agitter almost 2 years ago

#1195 - Proofread traditional vaccines

Pull Request - State: closed - Opened by agitter almost 2 years ago - 14 comments

#1194 - Update rootstock on 2023-01-13

Pull Request - State: closed - Opened by agitter almost 2 years ago - 7 comments

#1193 - Update agitter metadata with coi and vaccines admin

Pull Request - State: closed - Opened by agitter almost 2 years ago - 2 comments

#1192 - Small updates to legend

Pull Request - State: closed - Opened by rando2 almost 2 years ago - 7 comments

#1191 - Response to reviewer suggestions for reorg of subunit vaccines

Pull Request - State: closed - Opened by rando2 almost 2 years ago - 9 comments
Labels: vaccines

#1190 - Final reorg of IWV section

Pull Request - State: closed - Opened by rando2 almost 2 years ago - 9 comments
Labels: vaccines

#1189 - Final reorg of LAV section

Pull Request - State: closed - Opened by rando2 almost 2 years ago - 3 comments

#1188 - Reviewer comment 3.44

Pull Request - State: closed - Opened by RLordan almost 2 years ago - 7 comments
Labels: Merge Pending Checks

#1187 - Additional responses to reviewer comments (WIP)

Pull Request - State: closed - Opened by rando2 almost 2 years ago - 10 comments

#1186 - Immunological edits to vaccines paper

Pull Request - State: closed - Opened by rando2 almost 2 years ago - 2 comments
Labels: vaccines

#1185 - Draft response to second vaccines manuscript reviews

Pull Request - State: closed - Opened by rando2 about 2 years ago - 23 comments
Labels: Merge Pending Checks

#1184 - Fix table syntax

Pull Request - State: closed - Opened by agitter about 2 years ago

#1183 - Revisions for Traditional Vaccines Manuscript

Issue - State: closed - Opened by rando2 about 2 years ago - 4 comments
Labels: vaccines

#1182 - Final changes for resubmission of novel vaccines

Pull Request - State: closed - Opened by rando2 about 2 years ago - 10 comments

#1181 - Add DBMI affiliation

Pull Request - State: closed - Opened by rando2 about 2 years ago - 2 comments

#1180 - Make vaccines maps easier to read

Pull Request - State: closed - Opened by rando2 about 2 years ago - 5 comments
Labels: vaccines

#1179 - Minor revisions to novel vaccines

Pull Request - State: closed - Opened by rando2 about 2 years ago - 8 comments
Labels: vaccines

#1178 - Revisions to Novel Vaccines manuscript

Issue - State: closed - Opened by rando2 about 2 years ago - 5 comments

#1177 - HTML manuscript not updating

Issue - State: open - Opened by agitter about 2 years ago - 7 comments

#1176 - Update status of vaccine manuscripts

Pull Request - State: closed - Opened by rando2 about 2 years ago - 3 comments

#1175 - Need to appeal arXiv rejection of the novel vaccines manuscript

Issue - State: closed - Opened by rando2 about 2 years ago - 23 comments

#1174 - Response to feedback on novel vaccines

Pull Request - State: closed - Opened by rando2 over 2 years ago - 25 comments

#1173 - Figure for Diagnostics Manuscript

Issue - State: open - Opened by rando2 over 2 years ago
Labels: diagnostic

#1172 - Fix error in variable name

Pull Request - State: closed - Opened by rando2 over 2 years ago - 1 comment

#1171 - Split and update appendix for vaccines

Pull Request - State: closed - Opened by rando2 over 2 years ago - 6 comments

#1170 - Bug fix: worldwide vaccine stats from OWID

Pull Request - State: closed - Opened by rando2 over 2 years ago

#1169 - Additional template variables for vaccines manuscripts

Pull Request - State: closed - Opened by rando2 over 2 years ago - 1 comment

#1168 - Vaccine manuscripts proofreading

Pull Request - State: closed - Opened by agitter over 2 years ago - 18 comments
Labels: Merge Pending Checks

#1167 - Final edits to traditional vaccines ms

Pull Request - State: closed - Opened by rando2 over 2 years ago - 21 comments
Labels: Merge Pending Checks

#1166 - New Paper (Other): The molecular epidemiology of multiple zoonotic origins of SARS-CoV-2

Issue - State: open - Opened by dziakj1 over 2 years ago
Labels: New Paper, virology, epidemiology, New Peer-Reviewed Paper

#1165 - New Paper (Other): The Huanan Seafood Wholesale Market in Wuhan was the early epicenter of the COVID-19 pandemic

Issue - State: open - Opened by dziakj1 over 2 years ago
Labels: New Paper, virology, epidemiology, New Peer-Reviewed Paper

#1163 - Track changes feedback on pre-existing vaccine tech ms

Pull Request - State: closed - Opened by rando2 over 2 years ago - 2 comments

#1162 - Edits sent via tack changes for novel vaccines ms

Pull Request - State: closed - Opened by rando2 over 2 years ago - 4 comments
Labels: Merge Pending Checks, vaccines

#1161 - New Paper (Other): Inflammasome activation in infected macrophages drives COVID-19 pathology

Issue - State: open - Opened by dziakj1 over 2 years ago
Labels: New Paper, immunology, New Peer-Reviewed Paper

#1160 - Proposed vaccine author list

Pull Request - State: closed - Opened by rando2 over 2 years ago - 5 comments

#1159 - New Paper (Diagnostic): The Usefulness of Antigen Testing in Predicting Contagiousness in COVID-19

Issue - State: open - Opened by agitter over 2 years ago
Labels: New Paper, virology, diagnostic, biostatistics, New Peer-Reviewed Paper

#1158 - New Paper (Vaccine): Plausibility of Claimed Covid-19 Vaccine Efficacies by Age: A Simulation Study

Issue - State: open - Opened by agitter over 2 years ago
Labels: New Paper, virology, New Peer-Reviewed Paper, vaccines

#1157 - New Paper (Other): [Title]

Issue - State: open - Opened by dziakj1 over 2 years ago
Labels: New Paper, virology, immunology, New Peer-Reviewed Paper

#1156 - Revisions for Diagnostics manuscript

Issue - State: open - Opened by agitter over 2 years ago - 11 comments
Labels: diagnostic

#1155 - Read-through of vaccines manuscripts

Pull Request - State: closed - Opened by rando2 over 2 years ago - 4 comments

#1154 - Draft: Final structure/content for novel vaccines ms

Pull Request - State: closed - Opened by rando2 over 2 years ago - 3 comments

#1153 - Resolve conda environment errors

Pull Request - State: closed - Opened by agitter over 2 years ago - 4 comments

#1152 - Switch external resources workflow to mamba

Pull Request - State: closed - Opened by agitter over 2 years ago - 1 comment

#1151 - Correct broken references

Pull Request - State: closed - Opened by agitter over 2 years ago - 3 comments
Labels: Merge Pending Checks

#1150 - Updated vaccine external data code

Pull Request - State: closed - Opened by rando2 over 2 years ago - 4 comments

#1149 - Refactor external resources code for OWID/VIPER

Pull Request - State: closed - Opened by rando2 over 2 years ago - 8 comments
Labels: Technical

#1148 - Vaccines MS #1 rough draft

Pull Request - State: closed - Opened by rando2 over 2 years ago - 7 comments
Labels: vaccines

#1147 - Split vaccines because it's impossible to get it under 10k words

Pull Request - State: closed - Opened by rando2 over 2 years ago - 3 comments
Labels: vaccines

#1146 - Draft: Update evolution to include delta & omicron

Pull Request - State: open - Opened by rando2 over 2 years ago - 2 comments
Labels: evolution

#1145 - Draft: Read through/clean up for vaccines

Pull Request - State: closed - Opened by rando2 over 2 years ago - 7 comments
Labels: vaccines

#1144 - Add Covifenz

Pull Request - State: closed - Opened by rando2 over 2 years ago - 1 comment
Labels: Merge Pending Checks, vaccines

#1143 - Evolution - Wastewater surveillance

Pull Request - State: closed - Opened by RLordan over 2 years ago - 7 comments
Labels: Merge Pending Checks, evolution

#1142 - Add references back to PDF output

Pull Request - State: closed - Opened by agitter over 2 years ago - 2 comments

#1141 - COVID-19 as an anthroponotic disease

Pull Request - State: closed - Opened by rando2 over 2 years ago - 8 comments
Labels: Merge Pending Checks, evolution

#1140 - Update readme for Diagnostics submission

Pull Request - State: closed - Opened by rando2 over 2 years ago - 3 comments

#1139 - Minor updates to metadata roles

Pull Request - State: closed - Opened by rando2 over 2 years ago - 1 comment

#1138 - Update zoonotic disease section

Pull Request - State: closed - Opened by rando2 over 2 years ago - 5 comments
Labels: evolution

#1137 - Finalize diagnostics for preprint/submission

Pull Request - State: closed - Opened by rando2 over 2 years ago - 4 comments
Labels: diagnostic

#1136 - update author information

Pull Request - State: closed - Opened by davemai over 2 years ago - 1 comment

#1135 - Add summary figure to diagnostics

Pull Request - State: closed - Opened by rando2 over 2 years ago - 5 comments
Labels: diagnostic

#1134 - Add sensitivity and selectivity to diagnostics intro

Pull Request - State: closed - Opened by rando2 over 2 years ago - 2 comments
Labels: diagnostic

#1133 - References missing in PDF

Issue - State: closed - Opened by agitter over 2 years ago - 19 comments

#1132 - Diagnostics proofreading

Pull Request - State: closed - Opened by agitter over 2 years ago - 22 comments
Labels: diagnostic

#1131 - Bug: formatting issue in @url citations with trailing /

Issue - State: closed - Opened by cbrueffer over 2 years ago - 1 comment
Labels: bug

#1130 - Diagnostics: various improvements from a complete read-through.

Pull Request - State: closed - Opened by cbrueffer over 2 years ago - 3 comments
Labels: diagnostic

#1129 - Rest of text re: genetics of COVID-19 susceptibility

Pull Request - State: closed - Opened by rando2 over 2 years ago - 3 comments
Labels: evolution

#1128 - Static figure not rendering in HTML (but are in PDF)

Issue - State: closed - Opened by rando2 over 2 years ago - 3 comments
Labels: Technical

#1127 - Evolution framing edits

Pull Request - State: closed - Opened by rando2 over 2 years ago - 2 comments
Labels: evolution

#1124 - Update Ada's affiliation

Pull Request - State: closed - Opened by rando2 over 2 years ago - 3 comments

#1123 - Add section about candidate genes

Pull Request - State: closed - Opened by rando2 over 2 years ago - 3 comments
Labels: evolution

#1122 - Add date free LFTs ended in the UK

Pull Request - State: closed - Opened by joshuablake over 2 years ago - 1 comment

#1121 - Apply new organiational criteria for safety/efficacy to whole-virus vaccines

Pull Request - State: closed - Opened by rando2 over 2 years ago - 1 comment
Labels: vaccines

#1120 - Edits from @jessegmeyerlab

Pull Request - State: closed - Opened by rando2 over 2 years ago - 6 comments
Labels: diagnostic

#1119 - Rearrange Subunit Vaccine Text

Pull Request - State: closed - Opened by rando2 over 2 years ago - 2 comments
Labels: vaccines

#1115 - Add markdown tables from JSON to vaccines ms

Pull Request - State: closed - Opened by rando2 over 2 years ago - 18 comments
Labels: vaccines

#1095 - Link status issues from front page

Pull Request - State: closed - Opened by rando2 over 2 years ago - 4 comments

#1094 - Steps for submission of Diagnostics manuscript

Issue - State: closed - Opened by rando2 over 2 years ago - 22 comments
Labels: diagnostic

#1084 - Proposed Steps for Evolution Manuscript Submission

Issue - State: open - Opened by rando2 over 2 years ago - 11 comments
Labels: evolution