Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / googlegenomics/pipelines-tools issues and pull requests

#108 - Update containers in gcr.io/cloud-genomics-pipelines

Issue - State: open - Opened by wnojopra almost 3 years ago

#107 - v2beta release, using google life-sciences api

Pull Request - State: closed - Opened by alborzml about 5 years ago

#106 - Modify pipelines tool to accept regions along side zones.

Pull Request - State: closed - Opened by tneymanov about 5 years ago - 1 comment

#105 - Add scripts for creating disk images

Pull Request - State: open - Opened by tjennison-google over 5 years ago

#104 - Remove default Nvidia driver version

Pull Request - State: closed - Opened by tjennison-google over 5 years ago

#103 - Fix bug when using actions and output-interval

Pull Request - State: closed - Opened by kemp-google over 5 years ago

#102 - Use Pub/Sub to wait for operation completion

Pull Request - State: open - Opened by anamanolache over 5 years ago - 3 comments

#100 - Update base image version

Pull Request - State: closed - Opened by kemp-google almost 6 years ago

#99 - Update base image version

Pull Request - State: closed - Opened by kemp-google almost 6 years ago

#98 - Build the docker containers using travis

Pull Request - State: closed - Opened by kemp-google almost 6 years ago

#95 - Escape arguments to gsutil

Pull Request - State: closed - Opened by kemp-google almost 6 years ago

#94 - I/O container improvements

Pull Request - State: closed - Opened by kemp-google almost 6 years ago

#93 - Update GPU driver version to 410.79

Pull Request - State: closed - Opened by tjennison-google almost 6 years ago - 2 comments

#92 - Added support for executing a remote command on the ssh server

Pull Request - State: closed - Opened by anamanolache about 6 years ago

#91 - Default to using the pipelines-io container for IO

Pull Request - State: closed - Opened by kemp-google about 6 years ago

#90 - Support retry for gsutil actions

Issue - State: closed - Opened by nmousavi about 6 years ago - 1 comment

#87 - Add `--actions` flag to `watch` command

Pull Request - State: closed - Opened by kemp-google about 6 years ago

#86 - Finish migration of io/Dockerfile to sdk:slim

Pull Request - State: closed - Opened by kemp-google about 6 years ago

#85 - Fixed connection error through browser SSH

Pull Request - State: closed - Opened by anamanolache about 6 years ago - 1 comment

#84 - Add `--actions` flag to `watch` command

Pull Request - State: closed - Opened by kemp-google about 6 years ago

#83 - Add support for exporting v1 operations

Pull Request - State: open - Opened by tjennison-google about 6 years ago - 2 comments

#82 - Add continuation support to export command

Pull Request - State: closed - Opened by tjennison-google over 6 years ago

#81 - Add export pipelines tool subcommand

Pull Request - State: closed - Opened by tjennison-google over 6 years ago

#80 - Added support for writing logs into GCS during runs.

Pull Request - State: closed - Opened by sbabitz over 6 years ago

#79 - Accept comma-separated map flag values

Pull Request - State: closed - Opened by gkelly over 6 years ago

#78 - Use slim cloud-sdk instead of alpine

Pull Request - State: closed - Opened by tjennison-google over 6 years ago

#77 - Add --service-account flag

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#76 - Add an exponential back off when watching pipelines

Pull Request - State: closed - Opened by sbabitz over 6 years ago - 1 comment

#75 - Make watch back off from 5 second checking

Issue - State: open - Opened by kemp-google over 6 years ago

#74 - Drop the ssh-server Dockerfile

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#73 - Add '--cos-channel' flag

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#72 - Changed pipelines tool to use the published GCS fuse container

Pull Request - State: closed - Opened by sbabitz over 6 years ago

#71 - Use the published GCS fuse container instead of requiring a user provided image

Issue - State: closed - Opened by kemp-google over 6 years ago
Labels: enhancement, good first issue

#70 - Changed timeout flag to set API specified timeout

Pull Request - State: closed - Opened by sbabitz over 6 years ago

#68 - Added support for action timeouts

Pull Request - State: closed - Opened by sbabitz over 6 years ago

#67 - added a --all flag

Pull Request - State: closed - Opened by sbabitz over 6 years ago

#66 - Add support for setting action timeouts

Issue - State: closed - Opened by kemp-google over 6 years ago - 1 comment
Labels: enhancement, good first issue

#65 - Drop the default disk size in the pipelines tool

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#64 - Change `query` command defaults and options

Issue - State: closed - Opened by kemp-google over 6 years ago - 1 comment
Labels: enhancement, good first issue

#63 - Add --labels and --vm-labels flags

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#62 - Exit on unknown flags to query command

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#61 - Add --vm-labels flag to set labels on the VirtualMachine

Issue - State: closed - Opened by kemp-google over 6 years ago
Labels: enhancement, good first issue

#60 - Added GCE metadata based authentication support to the ssh server

Pull Request - State: closed - Opened by anamanolache over 6 years ago

#59 - Don't panic for non-ExitErrors

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#58 - Add a gsutil wrapper that uses 'retry'

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#57 - Use specified cloud SDK image when adding scopes

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#56 - Make the retry tool go-gettable

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#55 - Added flag to force actions into the same pid namespace

Pull Request - State: closed - Opened by anamanolache over 6 years ago

#54 - Add 'retry' tool and io container

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#53 - Add --disk-type flag to 'run' command

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#52 - Add a flag to force all actions into the same PID namespace

Issue - State: closed - Opened by kemp-google over 6 years ago
Labels: enhancement

#51 - Add GCE metadata based authentication support to the ssh server

Issue - State: closed - Opened by kemp-google over 6 years ago
Labels: enhancement

#50 - Add support for running an ssh debugger to the pipelines tool

Issue - State: closed - Opened by kemp-google over 6 years ago
Labels: enhancement

#49 - Add an ssh server container

Issue - State: closed - Opened by kemp-google over 6 years ago
Labels: enhancement

#48 - Add support for setting the network and subnetwork

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#47 - Out of range error fix

Pull Request - State: closed - Opened by anamanolache over 6 years ago

#46 - Add SSH server and support to pipelines tool

Pull Request - State: closed - Opened by anamanolache over 6 years ago

#45 - Added --limit flag to pipelines query

Pull Request - State: closed - Opened by anamanolache over 6 years ago

#44 - Add --limit flag to pipelines query and page through results as required

Issue - State: closed - Opened by nmousavi over 6 years ago - 1 comment

#43 - Change import path for rpc/code

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#42 - Avoid empty error messages

Pull Request - State: closed - Opened by anamanolache over 6 years ago

#41 - Some errors result in useless messages printed to the user

Issue - State: closed - Opened by kemp-google over 6 years ago - 1 comment

#40 - expects import "google.golang.org/genproto/googleapis/rpc/code"

Issue - State: closed - Opened by hyvera over 6 years ago - 1 comment

#39 - Localization improvements

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#38 - Retry on all non-fatal errors

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#37 - Retry all errors that aren't known to be fatal

Issue - State: closed - Opened by kemp-google over 6 years ago

#36 - Emit the operation ID when run fails

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#35 - Fix error message on execution failure

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#34 - Add --command to run single commands

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#33 - Allow script actions with no commands

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#32 - Add GPU support

Pull Request - State: closed - Opened by kemp-google over 6 years ago

#31 - Add a --preemptible-attempts flag to `pipelines run`

Pull Request - State: closed - Opened by anamanolache over 6 years ago

#30 - Retry non-fatal errors

Pull Request - State: closed - Opened by anamanolache over 6 years ago - 1 comment

#29 - Add a --preemptible-attempts flag to `pipelines run`

Issue - State: closed - Opened by kemp-google almost 7 years ago

#28 - Add --attempts flag to `pipelines run`

Issue - State: closed - Opened by kemp-google almost 7 years ago

#27 - Add support for using a disk image

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#26 - Add an option to use GCS fuse for localization

Issue - State: closed - Opened by kemp-google almost 7 years ago

#25 - Complete launch review for a public image of gcs fuse on GCR

Issue - State: closed - Opened by kemp-google almost 7 years ago - 1 comment
Labels: enhancement

#24 - Publish a gcs fuse docker image on gcr

Issue - State: closed - Opened by kemp-google almost 7 years ago - 1 comment
Labels: enhancement

#23 - Add directory/subtree localization/delocalization

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#22 - Support naming input and output parameters

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#21 - Set entrypoint to 'bash'

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#20 - Add support for uploading small local files

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#19 - More work towards supporting the DV runner

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#18 - Add a tool to export operations into BigQuery

Issue - State: closed - Opened by kemp-google almost 7 years ago
Labels: enhancement, good first issue

#17 - Various improvements as part of the DV work

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#16 - Retry transient HTTP errors

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#15 - Use 'exec' form for ENTRYPOINT

Pull Request - State: closed - Opened by kemp-google almost 7 years ago - 1 comment

#9 - Abort on CTRL+C and fix a panic in the migration tool

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#8 - Various improvements

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#6 - Add Dockerfile

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#5 - Use the alpine variant of cloud-sdk

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#4 - Expand the README

Pull Request - State: closed - Opened by kemp-google almost 7 years ago

#3 - Add simple command list if no command is specified

Pull Request - State: closed - Opened by kemp-google almost 7 years ago