google/fhir-data-pipes issues and pull requests

#915 - Bump org.slf4j:slf4j-api from 2.0.9 to 2.0.11

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#914 - Bump com.google.auth:google-auth-library-oauth2-http from 1.20.0 to 1.21.0

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#913 - Bump org.slf4j:slf4j-api from 2.0.9 to 2.0.10

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago - 1 comment
Labels: dependencies

#912 - Task Fhir Resource failing with "Composite converter must be given a single composite element, received: uuid"

Issue - State: open - Opened by cchigoriwa 11 months ago - 3 comments
Labels: bug, P1:must

#911 - Bump org.apache.maven.plugins:maven-compiler-plugin from 3.11.0 to 3.12.1

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#910 - Bump org.springframework.boot:spring-boot-dependencies from 3.1.5 to 3.2.1

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago - 2 comments
Labels: dependencies

#909 - Bump org.postgresql:postgresql from 42.7.0 to 42.7.1

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#908 - Bump com.fasterxml.jackson.core:jackson-core from 2.16.0 to 2.16.1

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#907 - Bump version.camel from 3.2.0 to 4.3.0

Pull Request - State: open - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#906 - Bump org.apache.maven.plugins:maven-javadoc-plugin from 3.6.2 to 3.6.3

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#905 - Bump hapi.fhir.version from 6.6.2 to 6.10.2

Pull Request - State: open - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#904 - Bump com.fasterxml.jackson.module:jackson-module-scala_2.11 from 2.16.0 to 2.16.1

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#903 - Bump org.apache.maven.plugins:maven-surefire-report-plugin from 3.2.2 to 3.2.3

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago - 1 comment
Labels: dependencies

#902 - Bump maven-surefire-plugin.version from 3.2.2 to 3.2.3

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago - 1 comment
Labels: dependencies

#901 - Added DB type support

Pull Request - State: closed - Opened by bashir2 12 months ago

#900 - The pipeline fails with `Out of Heap Space` error for high number of FHIR resources

Issue - State: open - Opened by chandrashekar-s 12 months ago
Labels: bug, P1:must

#899 - Bump org.postgresql:postgresql from 42.7.0 to 42.7.1

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#898 - Bump org.apache.maven.plugins:maven-javadoc-plugin from 3.6.2 to 3.6.3

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#897 - Bump ch.qos.logback:logback-classic from 1.4.11 to 1.4.14

Pull Request - State: open - Opened by dependabot[bot] 12 months ago
Labels: dependencies

#896 - First version of views DB support

Pull Request - State: closed - Opened by bashir2 almost 1 year ago - 2 comments

#895 - Bump ch.qos.logback:logback-classic from 1.4.11 to 1.4.12 in /pipelines

Pull Request - State: open - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#894 - Bump ch.qos.logback:logback-classic from 1.4.11 to 1.4.12 in /bunsen

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#893 - Enable the pipelines for Flink non-local execution modes as well

Issue - State: open - Opened by chandrashekar-s about 1 year ago
Labels: enhancement, P3:TBE

#892 - Attempting to fix the e2e failure

Pull Request - State: closed - Opened by bashir2 about 1 year ago - 1 comment

#891 - Investigate/Optimize the number of reshuffle operations for writing to Parquet files for incremental runs

Issue - State: open - Opened by chandrashekar-s about 1 year ago
Labels: P3:TBE

#890 - Bump org.apache.maven.plugins:maven-project-info-reports-plugin from 3.4.5 to 3.5.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#889 - Bump org.postgresql:postgresql from 42.6.0 to 42.7.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#888 - Bump org.springframework.boot:spring-boot-dependencies from 3.1.5 to 3.2.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 2 comments
Labels: dependencies

#887 - adds where and constant support for views

Pull Request - State: closed - Opened by bashir2 about 1 year ago - 1 comment

#886 - In every FHIR resources being copied from A to B, is it good enough to add capability to overwrite `meta.source` as such it tells where does the FHIR resource actually sourced from?

Issue - State: open - Opened by muhammad-levi about 1 year ago - 2 comments

#885 - Bump com.fasterxml.jackson.module:jackson-module-scala_2.11 from 2.15.3 to 2.16.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#884 - Bump com.fasterxml.jackson.core:jackson-core from 2.15.3 to 2.16.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#883 - Bump version.camel from 3.2.0 to 4.2.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies

#882 - Bump hapi.fhir.version from 6.6.2 to 6.10.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies

#881 - Bump org.codehaus.mojo:exec-maven-plugin from 3.1.0 to 3.1.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#880 - First version of ViewApplicator

Pull Request - State: closed - Opened by bashir2 about 1 year ago

#879 - `pipelines/batch` uber JAR facing error when running the 2nd time of synchronizing FHIR Server A to FHIR Server B (re-sync)

Issue - State: closed - Opened by muhammad-levi about 1 year ago - 3 comments
Labels: wontfix

#878 - Enable CI pipeline to run build and tests on a Windows platform

Issue - State: open - Opened by chandrashekar-s about 1 year ago
Labels: P3:TBE

#877 - Bump maven-surefire-plugin.version from 3.2.1 to 3.2.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#876 - Bump org.apache.maven.plugins:maven-javadoc-plugin from 3.6.0 to 3.6.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#875 - Bump org.apache.maven.plugins:maven-surefire-report-plugin from 3.2.1 to 3.2.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#874 - Generate `flink-conf.yaml` file automatically to set optimum conf values

Pull Request - State: closed - Opened by chandrashekar-s about 1 year ago - 6 comments

#873 - Bump com.google.apis:google-api-services-healthcare from v1-rev20231017-2.0.0 to v1-rev20231101-2.0.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#872 - added the client_credential OAuth option

Pull Request - State: closed - Opened by bashir2 about 1 year ago

#871 - Disable the Thrift Hive Server in Development mode

Pull Request - State: closed - Opened by chandrashekar-s about 1 year ago

#870 - Do not display the `View Raw Logs` button when the error file is not available

Pull Request - State: closed - Opened by chandrashekar-s about 1 year ago

#869 - Pipeline runs on Windows OS platform gives few warnings

Issue - State: open - Opened by chandrashekar-s about 1 year ago
Labels: bug, P2:should

#868 - Changes to support the Windows OS platform

Pull Request - State: closed - Opened by chandrashekar-s about 1 year ago - 1 comment

#867 - Bump org.apache.maven.plugins:maven-clean-plugin from 3.3.1 to 3.3.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#866 - Prevent creation of resource tables for erroneous DWH dirs

Pull Request - State: closed - Opened by bashir2 about 1 year ago

#865 - When creating resource tables on start-up, DWH dirs with errors should be skipped.

Issue - State: closed - Opened by bashir2 about 1 year ago
Labels: bug, P2:should

#864 - Bump org.apache.maven.plugins:maven-dependency-plugin from 3.6.0 to 3.6.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#863 - Bump org.apache.maven.plugins:maven-surefire-report-plugin from 3.1.2 to 3.2.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#862 - Bump hapi.fhir.version from 6.6.2 to 6.8.5

Pull Request - State: open - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies

#861 - Bump maven-surefire-plugin.version from 3.1.2 to 3.2.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#860 - Addressed "critical" docker image vulnerabilities

Pull Request - State: closed - Opened by bashir2 about 1 year ago

#859 - Reducing the memory configuration values to support low resource env

Pull Request - State: closed - Opened by chandrashekar-s about 1 year ago

#858 - Bump com.google.apis:google-api-services-healthcare from v1-rev20231003-2.0.0 to v1-rev20231017-2.0.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#857 - Bump org.springframework.boot:spring-boot-dependencies from 3.1.4 to 3.1.5

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#856 - Bump org.jacoco:jacoco-maven-plugin from 0.8.10 to 0.8.11

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#855 - Bump com.squareup.okhttp3:mockwebserver from 4.11.0 to 4.12.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#854 - Bump hapi.fhir.version from 6.6.2 to 6.8.4

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 2 comments
Labels: dependencies

#853 - Investigate and prioritize fixing of docker image vulnerabilities reported by GCP artifact registry

Issue - State: closed - Opened by bashir2 about 1 year ago - 1 comment
Labels: bug, P1:must

#852 - Register micrometer gauges as strong references

Pull Request - State: closed - Opened by chandrashekar-s about 1 year ago

#851 - Implement progress bar feature for the FHIR-Search mode as well

Issue - State: open - Opened by chandrashekar-s about 1 year ago
Labels: enhancement

#850 - Added the option for automatic registration of views.

Pull Request - State: closed - Opened by bashir2 about 1 year ago - 1 comment

#849 - Bump com.fasterxml.jackson.core:jackson-core from 2.15.2 to 2.15.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#848 - Bump com.fasterxml.jackson.module:jackson-module-scala_2.11 from 2.15.2 to 2.15.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#847 - Bump version.camel from 3.2.0 to 4.1.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies

#846 - Bump com.google.apis:google-api-services-healthcare from v1-rev20230921-2.0.0 to v1-rev20231003-2.0.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#845 - Batch only produces one FHIR resource type

Issue - State: closed - Opened by citizenrich about 1 year ago - 8 comments

#844 - Added sample flat views for 12 resources

Pull Request - State: closed - Opened by bashir2 about 1 year ago

#843 - Windows platform path issue due to the wildcard pattern(/) used in pipelines controller package (DwhFilesManager.java)

Issue - State: closed - Opened by Charantl about 1 year ago - 1 comment
Labels: bug, P1:must

#842 - Build failure

Issue - State: closed - Opened by citizenrich about 1 year ago - 6 comments

#841 - Bump com.google.auth:google-auth-library-oauth2-http from 1.19.0 to 1.20.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#840 - Refactor the pipelines (batch and incremental) to have fixed workflows

Pull Request - State: closed - Opened by chandrashekar-s about 1 year ago - 4 comments

#839 - The pipeline metrics in the UI are showing with value as NaN instead of the actual value

Issue - State: closed - Opened by chandrashekar-s about 1 year ago - 1 comment
Labels: bug, P1:must

#838 - Added coverage module to report aggregate coverage

Pull Request - State: closed - Opened by atulai-sg about 1 year ago - 2 comments

#837 - Feature for registering flat views in pipelines

Issue - State: closed - Opened by bashir2 about 1 year ago
Labels: enhancement, P1:must

#836 - Fix SonarQube issues found in `pipelines` and `bunsen` submodules.

Issue - State: open - Opened by bashir2 about 1 year ago
Labels: P2:should

#835 - Bump hapi.fhir.version from 6.6.2 to 6.8.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 2 comments
Labels: dependencies

#834 - Bump license-maven-plugin.version from 4.2 to 4.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#833 - Bump com.google.apis:google-api-services-healthcare from v1-rev20230830-2.0.0 to v1-rev20230921-2.0.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#832 - Bump hapi.fhir.version from 6.6.2 to 6.8.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 2 comments
Labels: dependencies

#831 - Bump version.camel from 3.2.0 to 4.0.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies

#830 - Bump org.apache.maven.plugins:maven-shade-plugin from 3.5.0 to 3.5.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#829 - Bump org.projectlombok:lombok from 1.18.28 to 1.18.30

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#828 - Bump org.springframework.boot:spring-boot-dependencies from 3.1.3 to 3.1.4

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#827 - Bump avro.version from 1.11.2 to 1.11.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#826 - Added a jupyter docker config with views

Pull Request - State: closed - Opened by bashir2 about 1 year ago

#825 - Question: How to run the `pipelines/controller` for sync-ing a FHIR Server to another FHIR Server? I saw that it is possible in the `pipelines/batch`

Issue - State: open - Opened by muhammad-levi about 1 year ago - 10 comments
Labels: enhancement, P2:should

GitHub / google/fhir-data-pipes issues and pull requests