Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / goeckslab/Galaxy-ML issues and pull requests

#71 - V0.10.0 -- hotfix

Pull Request - State: open - Opened by qchiujunhao 4 months ago

#70 - change 'None' to None for shuffle

Pull Request - State: closed - Opened by qchiujunhao 8 months ago

#69 - Save training loss history to .csv file

Issue - State: open - Opened by kxk302 over 1 year ago - 3 comments

#68 - Upgrade to v0.10.x

Pull Request - State: closed - Opened by qiagu about 2 years ago

#67 - Format of Search CV parameters

Issue - State: open - Opened by anuprulez over 2 years ago

#66 - Update tensorflow to v2.5, scikit-optimize to v0.9 and push version to v0.9.1

Pull Request - State: closed - Opened by qiagu about 3 years ago

#65 - Further simplify safePickler

Pull Request - State: closed - Opened by qiagu about 3 years ago

#64 - V0.9.0 issues

Issue - State: open - Opened by qiagu over 3 years ago

#63 - Update tool test data

Pull Request - State: closed - Opened by qiagu over 3 years ago

#62 - Fix requirement conflict

Pull Request - State: closed - Opened by qiagu over 3 years ago

#61 - Save galaxy_ml version in h5 model

Pull Request - State: closed - Opened by qiagu over 3 years ago

#60 - Fix get_scoring method (issue #59)

Pull Request - State: closed - Opened by kxk302 over 3 years ago - 6 comments

#59 - Fix get_scoring method

Issue - State: open - Opened by kxk302 over 3 years ago - 1 comment

#58 - Update docs for v0.8.3

Pull Request - State: closed - Opened by qiagu over 3 years ago

#57 - Update requirements

Pull Request - State: closed - Opened by qiagu over 3 years ago

#56 - Added confusion matrix to multi-class classification. Fixed README

Pull Request - State: closed - Opened by kxk302 over 3 years ago - 2 comments

#55 - V0.9.0 - update sklearn to v0.24.*, tensorflow to v2.* etc.

Pull Request - State: closed - Opened by qiagu over 3 years ago

#54 - Removed extra paranthesis and added prediction step to the test

Pull Request - State: closed - Opened by kxk302 over 3 years ago - 5 comments

#53 - Tear down test result files and fix a syntax error

Pull Request - State: closed - Opened by qiagu over 3 years ago

#52 - Bump tensorflow from 1.15.2 to 2.4.0

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#51 - Multi dimensional output

Pull Request - State: closed - Opened by kxk302 over 3 years ago - 10 comments

#50 - Bump tensorflow from 1.15.2 to 2.3.1

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 1 comment
Labels: dependencies

#49 - Bump tensorflow from 1.15.2 to 1.15.4

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 1 comment
Labels: dependencies

#48 - Remove "docs" from distribution

Pull Request - State: closed - Opened by mbargull over 4 years ago - 3 comments

#47 - allow None as string for shuffle

Pull Request - State: closed - Opened by bgruening over 4 years ago - 1 comment

#46 - Add BayesSearchCV to searchcv tool

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#44 - pump tensorflow version to v1.15.2

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#43 - Bump tensorflow from 1.15.0 to 1.15.2

Pull Request - State: closed - Opened by dependabot[bot] almost 5 years ago
Labels: dependencies

#42 - Add number of stratification bins to OrderedKFold

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#41 - Make spearman rank correlation scorer

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#40 - Refit is not set correctly in nested cv with no estimator output

Issue - State: closed - Opened by qiagu almost 5 years ago - 1 comment

#39 - Push tools to v1.0.8.2 and add image deep learning tool

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#38 - update online docs for v0.8.2

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#37 - Make model persistence using HDF5

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#36 - Make gen_compute_scores in utiles and make _dir non-searchable and so on

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#35 - update model_validations._fit_and_score

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#34 - Add drop_last_proba in stacking emsemble tools and so on

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#33 - expand secondary scoring for binarize target scorers

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#32 - Make validation_fraction in keras galaxy models

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#31 - Fix pickle error in saving binarze target classifier with pipeline

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#30 - Can't pickle pipeline.decision_function when saving a binarize target classifier

Issue - State: closed - Opened by qiagu almost 5 years ago - 1 comment

#29 - update tool to v1.0.8.1 and extend keras batch generator options

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#28 - Fix binarize target estimator issue and push to v0.8.1

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#27 - upgrade to v0.8.0

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#26 - upgrade to v0.8.0

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#25 - store warning ref variants in genomic variant batch generator

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#24 - Adds matplotlib svg format option in visualization tool

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#23 - catch errors in prediction saving in keras train eval tool

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#22 - make dynamic output of pipeline or final estimator

Pull Request - State: closed - Opened by qiagu almost 5 years ago

#21 - Adds comparison of stacking regressor

Pull Request - State: closed - Opened by qiagu about 5 years ago

#20 - update ml_visualization_ex tool with plotly v4.3.0

Pull Request - State: closed - Opened by qiagu about 5 years ago

#19 - About Missing column selector and header option in the ml_visualization_ex tool

Issue - State: open - Opened by qiagu about 5 years ago
Labels: tool / usage tips

#18 - Combining kras_batch_models and keras_model_builder into one tool

Issue - State: open - Opened by qiagu about 5 years ago
Labels: tools / enhancement

#17 - Messing up of the pipeline / final estimator option

Issue - State: closed - Opened by qiagu about 5 years ago - 1 comment
Labels: tools / enhancement

#16 - make binarize target classifiers support decision function

Pull Request - State: closed - Opened by qiagu about 5 years ago

#15 - make keras train and evaluation tool

Pull Request - State: closed - Opened by qiagu about 5 years ago

#14 - add result figures for classifications of Penn datasets

Pull Request - State: closed - Opened by qiagu about 5 years ago

#13 - add gridsearch results penn classification results

Pull Request - State: closed - Opened by qiagu about 5 years ago

#12 - Nested CV tool outputs cv_results from inner CVs

Pull Request - State: closed - Opened by qiagu about 5 years ago

#11 - add pwoertransformer to pikle whitelist

Pull Request - State: closed - Opened by qiagu about 5 years ago

#10 - add clean_params in utils

Pull Request - State: closed - Opened by qiagu about 5 years ago

#9 - Refactor binarize target estimators

Pull Request - State: closed - Opened by qiagu about 5 years ago

#8 - Update to v0.80

Pull Request - State: closed - Opened by qiagu about 5 years ago

#7 - add fitted model eval tool and fix VotingRegressor weights error

Pull Request - State: closed - Opened by qiagu about 5 years ago

#6 - various small tool updates and add train test split tools

Pull Request - State: closed - Opened by qiagu about 5 years ago

#5 - Add tool tests to circleci

Pull Request - State: closed - Opened by qiagu about 5 years ago
Labels: tools / enhancement

#4 - replace generators' fit with set_prcoessing attr

Pull Request - State: closed - Opened by qiagu about 5 years ago

#3 - add flake8 to circleci

Pull Request - State: closed - Opened by qiagu about 5 years ago

#2 - add circleci for API tests and push version to 0.8.0.dev

Pull Request - State: closed - Opened by qiagu about 5 years ago

#1 - make image DataFrame generator

Pull Request - State: closed - Opened by qiagu about 5 years ago
Labels: api / enhancement