Ecosyste.ms: Issues

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GitHub / gmod/chado issues and pull requests

#46 - Index feature_relationship_idx1b

Issue - State: closed - Opened by bradfordcondon almost 7 years ago - 1 comment
Labels: Chado 1.4 Suggestion

#45 - “Variable” table (v1.4)

Issue - State: closed - Opened by spficklin almost 7 years ago - 7 comments
Labels: Chado 1.4 Suggestion

#44 - Add date_created, date_updated to “base” tables (v1.4)

Issue - State: open - Opened by bradfordcondon almost 7 years ago
Labels: Chado 1.4 Suggestion, 2019 PAG Hackathon

#43 - Tables requested by Main Lab

Issue - State: open - Opened by spficklin almost 7 years ago - 1 comment
Labels: 2018 PAG Hackathon, Chado 1.4 Suggestion

#42 - Changes to cvterm, dbxref and project tables

Issue - State: open - Opened by spficklin almost 7 years ago - 4 comments
Labels: Chado 1.4 Suggestion, 2019 PAG Hackathon

#41 - Changes to the Project and Biomaterial table

Issue - State: open - Opened by spficklin almost 7 years ago - 15 comments
Labels: 2018 PAG Hackathon, Chado 1.4 Suggestion, 2019 PAG Hackathon, PR Submitted

#40 - analysis.uniquename (v1.4)

Issue - State: open - Opened by bradfordcondon almost 7 years ago - 14 comments
Labels: Chado 1.4 Suggestion, 2019 PAG Hackathon, Hackathon: easy, PR Submitted

#39 - BigInt for primary keys

Issue - State: closed - Opened by bradfordcondon almost 7 years ago - 1 comment
Labels: Chado 1.4 Suggestion

#38 - Auditing record creation

Issue - State: open - Opened by spficklin almost 7 years ago
Labels: Chado 1.4 Suggestion

#37 - Companalysis Module

Issue - State: open - Opened by spficklin almost 7 years ago - 4 comments
Labels: 2018 PAG Hackathon, Chado 1.4 Suggestion, 2019 PAG Hackathon, Priority: low, Hackathon: easy, PR Submitted

#36 - 1.4 schema documentation

Issue - State: closed - Opened by bradfordcondon almost 7 years ago - 38 comments
Labels: Chado 1.4 Suggestion

#35 - Phenotype Module changes to handle EQ statements

Issue - State: open - Opened by spficklin almost 7 years ago - 2 comments
Labels: Chado 1.4 Suggestion, 2019 PAG Hackathon, Hackathon: hard, Priority: low

#34 - Phenotype Module

Issue - State: open - Opened by spficklin almost 7 years ago - 5 comments
Labels: Chado 1.4 Suggestion

#33 - Changes to feature_stock, featuremap_stock, featureinterval and linkers

Issue - State: open - Opened by spficklin almost 7 years ago - 3 comments
Labels: Chado 1.4 Suggestion

#32 - Stocks with multiple organisms (v1.4)

Issue - State: open - Opened by spficklin almost 7 years ago - 5 comments
Labels: Chado 1.4 Suggestion

#31 - EImage Table / Module (v1.4)

Issue - State: open - Opened by spficklin almost 7 years ago - 16 comments
Labels: 2018 PAG Hackathon, Chado 1.4 Suggestion

#30 - Property Table Updates

Issue - State: open - Opened by spficklin almost 7 years ago - 4 comments
Labels: Chado 1.4 Suggestion

#29 - group module

Issue - State: open - Opened by bradfordcondon almost 7 years ago - 11 comments
Labels: Chado 1.4 Suggestion

#28 - Updated synonym table?

Issue - State: closed - Opened by EvanCarroll almost 7 years ago - 2 comments

#27 - Suggestions for schema modification.

Issue - State: open - Opened by EvanCarroll almost 7 years ago - 2 comments
Labels: Chado 1.4 Suggestion, 2019 PAG Hackathon, Hackathon: pending

#26 - Add cvalue_id to all prop tables

Issue - State: closed - Opened by scottcain almost 7 years ago - 6 comments
Labels: 2018 PAG Hackathon, Chado 1.4 Suggestion

#25 - Updating MAGE module meta data to support next gen data

Issue - State: open - Opened by scottcain almost 7 years ago - 1 comment
Labels: 2018 PAG Hackathon, Chado 1.4 Suggestion, 2019 PAG Hackathon, Hackathon: hard, Priority: low

#24 - gmod_load_cvterms.pl does not (yet) support cross cv relationships

Issue - State: closed - Opened by bellerbrock over 7 years ago - 1 comment

#23 - gmod_load_cvterms.pl does not load synonym types

Issue - State: closed - Opened by bellerbrock over 7 years ago - 10 comments

#22 - Cleanup files.

Pull Request - State: closed - Opened by hexylena over 8 years ago - 1 comment

#21 - Add many indexes

Pull Request - State: closed - Opened by scottcain almost 9 years ago - 1 comment

#20 - Removed MANY of the insert commands for intializaing the database, in…

Pull Request - State: closed - Opened by scottcain almost 9 years ago

#19 - should be able to pull ro.obo from a public gist, but will test to ma…

Pull Request - State: closed - Opened by scottcain about 9 years ago

#18 - changing ontology URLs to be purls

Pull Request - State: closed - Opened by yasirs about 9 years ago - 1 comment

#17 - Relations ontology 404 not found

Issue - State: closed - Opened by yasirs about 9 years ago - 6 comments

#16 - Fix functions bigint

Pull Request - State: closed - Opened by scottcain about 9 years ago

#15 - diff.sql file for v1.23 to v1.31 completed

Pull Request - State: closed - Opened by spficklin about 9 years ago - 1 comment

#14 - Only warn if no rows found

Pull Request - State: closed - Opened by hexylena over 9 years ago - 2 comments

#11 - Create schema

Pull Request - State: closed - Opened by scottcain over 9 years ago

#10 - Additional changes

Pull Request - State: closed - Opened by spficklin over 9 years ago - 1 comment

#9 - lots of cleaning up and preparing for building a new schema; problems…

Pull Request - State: closed - Opened by scottcain over 9 years ago

#8 - Added new DDL for v1.3

Pull Request - State: closed - Opened by spficklin over 9 years ago - 1 comment

#7 - Created db module and moved db/dbxref tables to it

Pull Request - State: closed - Opened by spficklin over 9 years ago - 2 comments

#6 - Move ddl2modules

Pull Request - State: closed - Opened by spficklin over 9 years ago - 4 comments

#5 - removing all of the strain tables in prep for adding infraspecific fi…

Pull Request - State: closed - Opened by scottcain over 9 years ago

#4 - updating all primary keys and related foreign keys to bigint. Pretty…

Pull Request - State: closed - Opened by scottcain over 9 years ago - 1 comment

#3 - Add keys to "temp" tables.

Issue - State: open - Opened by scottcain over 9 years ago

#2 - XSLT transforms take not-insignificant amounts of RAM

Issue - State: open - Opened by hexylena over 9 years ago

#1 - PRIMARY KEYs should be TYPE bigint [CASCADE]

Issue - State: closed - Opened by astralarya over 9 years ago - 1 comment