glotzerlab/signac issues and pull requests

#903 - Remove Zenodo.

Pull Request - State: closed - Opened by bdice over 1 year ago - 4 comments

#902 - Pre-release 2.0.0

Pull Request - State: closed - Opened by bdice over 1 year ago - 1 comment

#901 - Update GitHub Actions and dependency versions.

Pull Request - State: closed - Opened by bdice over 1 year ago - 3 comments

#900 - Bump coverage from 7.1.0 to 7.2.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#899 - Bump pytest-xdist from 3.1.0 to 3.2.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#898 - Bump zarr from 2.13.6 to 2.14.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 6 comments
Labels: dependencies

#897 - Bump redis from 4.4.2 to 4.5.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#896 - Bump numpy from 1.24.1 to 1.24.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#895 - Use Python 3.11 for package releases, enable 3.11 testing with newest dependencies.

Pull Request - State: closed - Opened by bdice over 1 year ago - 2 comments

#894 - Update pre-commit hooks for black and isort.

Pull Request - State: closed - Opened by b-butler over 1 year ago - 2 comments

#893 - Bump pre-commit hooks.

Pull Request - State: closed - Opened by bdice over 1 year ago - 2 comments

#892 - Bump zarr from 2.13.3 to 2.13.6

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies

#891 - Bump redis from 4.4.0 to 4.4.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#890 - Bump h5py from 3.7.0 to 3.8.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#889 - Bump coverage from 7.0.1 to 7.1.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#888 - Bump pandas from 1.5.2 to 1.5.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#887 - Bump pytest from 7.2.0 to 7.2.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#886 - Fix JSONAttrDict docstring

Pull Request - State: closed - Opened by kidrahahjo over 1 year ago - 1 comment

#885 - Enable testing for Python 3.11 once wheels exist for h5py

Issue - State: closed - Opened by bdice over 1 year ago - 1 comment

#884 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago - 2 comments

#883 - Bump coverage from 6.5.0 to 7.0.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#882 - Bump pytest-xdist from 3.0.2 to 3.1.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#881 - Bump redis from 4.3.5 to 4.4.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#880 - Bump numpy from 1.23.5 to 1.24.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#879 - Bump tables from 3.7.0 to 3.8.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#878 - Move to a fully pyproject.toml based build

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 2 comments

#877 - Makes the config module internal

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 1 comment

#876 - Decide which modules should define all

Issue - State: open - Opened by vyasr almost 2 years ago - 2 comments

#875 - Add Python 3.11 Support

Pull Request - State: closed - Opened by b-butler almost 2 years ago - 5 comments

#874 - Make config module internal

Issue - State: closed - Opened by vyasr almost 2 years ago - 2 comments

#873 - Move calc_id into job.py

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 1 comment

#872 - Move _DictManager into h5store.py.

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 2 comments

#871 - Treat all warnings as errors

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 1 comment

#870 - Move utility functions closer to usage

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 1 comment

#869 - Move syncutil code into sync.py.

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 1 comment

#868 - Move all modules into root namespace.

Pull Request - State: closed - Opened by bdice almost 2 years ago - 8 comments

#867 - Bump pandas from 1.5.1 to 1.5.2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#866 - Bump pymongo from 4.3.2 to 4.3.3

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#865 - Bump numpy from 1.23.4 to 1.23.5

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#864 - Bump redis from 4.3.4 to 4.3.5

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#863 - Remove signac.testing

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 1 comment

#862 - WIP: Move all modules into root namespace.

Pull Request - State: closed - Opened by csadorf almost 2 years ago - 7 comments
Labels: expertise-needed, refactor

#861 - Job initialization changes data type of keys in nested dictionaries

Issue - State: closed - Opened by sagnik almost 2 years ago - 3 comments

#860 - Refactor _Config class.

Pull Request - State: closed - Opened by bdice almost 2 years ago - 1 comment

#859 - Miscellaneous TODO items

Pull Request - State: closed - Opened by bdice almost 2 years ago - 1 comment
Labels: refactor

#858 - Make _DictManager private.

Pull Request - State: closed - Opened by bdice almost 2 years ago - 1 comment
Labels: refactor

#857 - Clean up test files

Pull Request - State: closed - Opened by bdice almost 2 years ago - 3 comments
Labels: refactor

#856 - Update v2 migration logic.

Pull Request - State: closed - Opened by bdice almost 2 years ago - 1 comment
Labels: bug

#855 - Error on invalid config data

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 1 comment

#854 - Move _collect_by_type to project.py

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 1 comment

#853 - Remove common.validate

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 1 comment
Labels: refactor

#852 - Only try to move v1 schema files that exist.

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 2 comments

#851 - Remove old tests

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 2 comments
Labels: refactor

#850 - Reenable multithreading tests

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 4 comments

#849 - Delete cov.sh

Pull Request - State: closed - Opened by mikemhenry almost 2 years ago - 5 comments

#848 - Stop filtering out warnings.

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 1 comment
Labels: enhancement

#847 - Remove deprecated config APIs.

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 1 comment
Labels: refactor

#846 - Remove unnecessary _add_prefix call and simplify as much as possible.

Pull Request - State: closed - Opened by vyasr almost 2 years ago - 1 comment
Labels: refactor

#845 - Cleanup post-merge 2.0

Pull Request - State: closed - Opened by bdice almost 2 years ago - 1 comment

#844 - signac 2.0 post-merge cleanup tasks

Issue - State: closed - Opened by bdice almost 2 years ago - 3 comments

#842 - Bump pandas from 1.5.0 to 1.5.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#841 - Bump zarr from 2.13.2 to 2.13.3

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#840 - Bump pytest from 7.1.3 to 7.2.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#839 - Bump numpy from 1.23.3 to 1.23.4

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 2 comments
Labels: dependencies

#838 - Bump pytest-xdist from 2.5.0 to 3.0.2

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#831 - Prepare signac-flow and signac-dashboard for signac 2.0

Issue - State: closed - Opened by bdice almost 2 years ago - 4 comments
Labels: pinned

#816 - Warn users to migrate when old schema is detected and enable migration CLI

Pull Request - State: closed - Opened by vyasr about 2 years ago - 6 comments

#810 - Remove `filterparse._add_prefix`

Issue - State: closed - Opened by vyasr about 2 years ago
Labels: enhancement, good first issue, refactor

#809 - Replace "data space" in docstrings with new definitions

Issue - State: open - Opened by cbkerr about 2 years ago - 3 comments
Labels: documentation

#789 - Remove remaining config API

Issue - State: closed - Opened by mikemhenry about 2 years ago
Labels: requires-1.x-deprecation

#756 - Reorganize modules for signac 2.0

Issue - State: closed - Opened by vyasr over 2 years ago - 13 comments

#743 - Replace data space with workspace in docstrings

Issue - State: open - Opened by cbkerr over 2 years ago - 17 comments

#741 - Potential improvements for _SearchIndexer

Issue - State: open - Opened by vyasr over 2 years ago - 3 comments
Labels: pinned

#709 - Improve documentation and usage of signac.testing

Issue - State: closed - Opened by vyasr over 2 years ago - 7 comments
Labels: documentation

#707 - Block merging with incomplete PR check list

Issue - State: open - Opened by cbkerr over 2 years ago - 4 comments
Labels: stale

#531 - Add tests of thread-safety for job objects

Issue - State: closed - Opened by vyasr over 3 years ago - 3 comments

#430 - Improve symlink support on Windows

Issue - State: closed - Opened by bdice almost 4 years ago - 11 comments
Labels: enhancement, documentation, stale

#344 - NumPy docstyle should denote "optional" arguments

Issue - State: closed - Opened by bdice about 4 years ago - 15 comments
Labels: good first issue, doc-style, pinned

#242 - Duplicate docstrings between related classes and functions

Issue - State: closed - Opened by vyasr almost 5 years ago - 7 comments
Labels: enhancement, documentation, pinned

#189 - Implement feature to encode and retrieve signac elements by URI.

Pull Request - State: open - Opened by csadorf over 5 years ago - 18 comments
Labels: enhancement, good first issue, pinned

#96 - Proposal: Cross-references of jobs

Issue - State: open - Opened by csadorf about 6 years ago - 6 comments
Labels: enhancement, good first issue, proposal, pinned

#84 - Synchronization via Globus

Issue - State: closed - Opened by csadorf over 6 years ago - 6 comments
Labels: enhancement

GitHub / glotzerlab/signac issues and pull requests