Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / glotzerlab/garnett issues and pull requests
#166 - Support GSD 3.0
Issue -
State: open - Opened by tommy-waltmann over 1 year ago
Labels: bug
#165 - Cif scaling
Pull Request -
State: open - Opened by klarh over 1 year ago
#164 - CI deploy key not enabled for this repository
Issue -
State: open - Opened by klarh over 1 year ago
Labels: bug
#163 - Update usage of `read_frame` when reading hoomd trajectories
Issue -
State: open - Opened by tommy-waltmann almost 2 years ago
Labels: bug
#162 - Fix frame ordering in GTAR-format files
Pull Request -
State: closed - Opened by klarh almost 3 years ago
- 6 comments
#161 - Skip writing attributes that aren't present in frames in GetarFileWriter
Pull Request -
State: closed - Opened by klarh over 4 years ago
- 1 comment
#160 - Modernize DCD Reader's use of NumPy
Issue -
State: open - Opened by bdice over 4 years ago
Labels: enhancement
#159 - Add badges for PyPI / conda-forge, etc.
Issue -
State: open - Opened by bdice over 4 years ago
Labels: enhancement
#158 - Release/0.7.1
Pull Request -
State: closed - Opened by bdice over 4 years ago
- 1 comment
#157 - Clarify dependencies
Pull Request -
State: closed - Opened by bdice over 4 years ago
- 1 comment
Labels: bug
#156 - Release/v0.7.0
Pull Request -
State: closed - Opened by bdice over 4 years ago
- 4 comments
#155 - Revised FrameData and snapshot API, added integration tests.
Pull Request -
State: closed - Opened by bdice over 4 years ago
- 1 comment
Labels: enhancement
#154 - Some documentation cleanup before 0.7.0.
Pull Request -
State: closed - Opened by bdice over 4 years ago
- 1 comment
Labels: documentation
#153 - Fix type subsetting in to_plato_scene.
Pull Request -
State: closed - Opened by bdice over 4 years ago
Labels: bug
#152 - Update CI & Deployment
Pull Request -
State: closed - Opened by bdice over 4 years ago
- 1 comment
Labels: enhancement
#151 - Improve CIF _atom_site_label type handling
Pull Request -
State: closed - Opened by bdice over 4 years ago
- 1 comment
Labels: enhancement
#150 - type_shape for sphere unions
Pull Request -
State: closed - Opened by lyrivera over 4 years ago
- 2 comments
#149 - Enable trajectory property for box objects
Pull Request -
State: closed - Opened by lyrivera over 4 years ago
Labels: enhancement
#148 - Update GetarFileReader to use the last index present for each quantity.
Pull Request -
State: closed - Opened by klarh over 4 years ago
- 2 comments
#147 - Use types and typeid properties consistent with HOOMD
Pull Request -
State: closed - Opened by bdice over 4 years ago
- 6 comments
Labels: enhancement
#146 - Miscellaneous improvements
Pull Request -
State: closed - Opened by lyrivera over 4 years ago
#145 - Update GSD reader to use the GSD v2.0.0 API
Pull Request -
State: closed - Opened by lyrivera almost 5 years ago
- 3 comments
#144 - Refactor hoomd snapshot methods in the Frame and Trajectory classes
Pull Request -
State: closed - Opened by lyrivera almost 5 years ago
- 1 comment
Labels: enhancement
#143 - Add cif spg key
Pull Request -
State: closed - Opened by lyrivera almost 5 years ago
- 1 comment
#142 - Improve merging of points in CIF files
Pull Request -
State: closed - Opened by klarh almost 5 years ago
#141 - Add another source of cif file space group symmetry operations
Pull Request -
State: closed - Opened by klarh almost 5 years ago
- 2 comments
#140 - Update GSD reader/writer for GSD 2.0
Issue -
State: closed - Opened by bdice almost 5 years ago
- 1 comment
Labels: enhancement
#139 - Make FrameData private and merge _RawFrameData and FrameData
Issue -
State: closed - Opened by klywang almost 5 years ago
Labels: question, refactor
#138 - Refactor and test hoomd snapshot functions in the Frame and Trajectory class
Issue -
State: closed - Opened by klywang almost 5 years ago
Labels: unittest, refactor
#137 - Use types and typeid properties consistent with HOOMD
Issue -
State: closed - Opened by bdice almost 5 years ago
- 4 comments
Labels: enhancement
#136 - Enable templates for DCD files in garnett.read.
Pull Request -
State: closed - Opened by bdice almost 5 years ago
- 6 comments
Labels: enhancement
#135 - Add option to explicitly set number of dimensions on read/write (specific use case: DCD)
Issue -
State: open - Opened by shannon-moran almost 5 years ago
- 2 comments
Labels: enhancement
#134 - Change Trajectory and Frame API to be consistent with HOOMD conventions
Pull Request -
State: closed - Opened by gaofy95 almost 5 years ago
- 4 comments
Labels: enhancement
#133 - Enable/read user defined logged quantities from GSD files.
Issue -
State: closed - Opened by lyrivera about 5 years ago
- 4 comments
Labels: enhancement
#132 - release/v0.6.1
Pull Request -
State: closed - Opened by lyrivera about 5 years ago
#131 - release/v0.6.0
Pull Request -
State: closed - Opened by lyrivera about 5 years ago
#130 - Update contributors for v0.6.0
Pull Request -
State: closed - Opened by bdice about 5 years ago
#129 - Properly write default shape into POS files
Pull Request -
State: closed - Opened by lyrivera about 5 years ago
- 3 comments
#128 - Release/v0.6.0
Pull Request -
State: closed - Opened by lyrivera about 5 years ago
- 4 comments
#127 - Add support for GSD shape specification
Pull Request -
State: closed - Opened by bdice about 5 years ago
- 1 comment
Labels: enhancement, writer, trajectory, reader
#126 - Fixed plato box primitive.
Pull Request -
State: closed - Opened by bdice about 5 years ago
- 1 comment
#125 - Simpler fix for left-handed box
Pull Request -
State: closed - Opened by vyasr about 5 years ago
- 4 comments
#124 - Skip showEdges token when reading POS files
Pull Request -
State: closed - Opened by lyrivera about 5 years ago
- 1 comment
#123 - __main__ entry point for file conversion
Issue -
State: open - Opened by bdice about 5 years ago
- 3 comments
Labels: enhancement
#122 - Drop Python 2.x support
Pull Request -
State: closed - Opened by lyrivera about 5 years ago
#121 - Fix box regularization
Pull Request -
State: closed - Opened by lyrivera about 5 years ago
- 9 comments
#120 - Feature/to plato scene
Pull Request -
State: closed - Opened by bdice about 5 years ago
- 2 comments
#119 - Release/v0.5.0
Pull Request -
State: closed - Opened by bdice about 5 years ago
#118 - Use pip requirements for all CI dependencies
Pull Request -
State: closed - Opened by bdice over 5 years ago
- 1 comment
#117 - Change CI GSD & GTAR install method
Pull Request -
State: closed - Opened by lyrivera over 5 years ago
- 1 comment
#116 - Box regularization yields wrong orientations
Issue -
State: open - Opened by lyrivera over 5 years ago
- 2 comments
Labels: bug
#115 - Old Links
Issue -
State: closed - Opened by j-proc over 5 years ago
- 6 comments
Labels: bug, minor
#114 - Added headings and badges to documentation, updated README to match.
Pull Request -
State: closed - Opened by bdice over 5 years ago
#113 - Added some badges.
Pull Request -
State: closed - Opened by bdice over 5 years ago
#112 - Update readthedocs.yml
Pull Request -
State: closed - Opened by bdice over 5 years ago
- 3 comments
#111 - Update readthedocs.yml
Pull Request -
State: closed - Opened by bdice over 5 years ago
- 1 comment
#110 - Build documentation on ReadTheDocs
Pull Request -
State: closed - Opened by lyrivera over 5 years ago
- 4 comments
#109 - Test for trajectory with varying number of particles per frame
Issue -
State: open - Opened by lyrivera over 5 years ago
Labels: enhancement
#108 - Trajectory attribute for all box objects
Issue -
State: closed - Opened by bdice over 5 years ago
- 2 comments
Labels: enhancement
#107 - Update changelog
Pull Request -
State: closed - Opened by klywang over 5 years ago
- 5 comments
#106 - Update documentation
Pull Request -
State: closed - Opened by lyrivera over 5 years ago
#105 - Add github CODEOWNERS & PR/issues templates
Pull Request -
State: closed - Opened by lyrivera over 5 years ago
#104 - Fix namespace for mock import of dcdreader in documentation
Pull Request -
State: closed - Opened by klarh over 5 years ago
- 2 comments
#103 - Add GitHub CODEOWNERS / PR, Issue templates
Issue -
State: closed - Opened by bdice over 5 years ago
#102 - Rename to garnett in hidden configuration files.
Pull Request -
State: closed - Opened by bdice over 5 years ago
- 3 comments
#101 - Enable installation through pip and conda
Issue -
State: closed - Opened by lyrivera over 5 years ago
- 2 comments
#100 - Host documentation on ReadTheDocs
Issue -
State: closed - Opened by bdice over 5 years ago
#99 - Add license headers to all scripts & source files
Pull Request -
State: closed - Opened by lyrivera over 5 years ago
- 2 comments
#98 - Doc/copyright michigan
Pull Request -
State: closed - Opened by bdice over 5 years ago
- 1 comment
#97 - Rename package to garnett.
Pull Request -
State: closed - Opened by bdice over 5 years ago
- 7 comments
#96 - Fix/cleanup repo root
Pull Request -
State: closed - Opened by bdice over 5 years ago
#95 - Update credits.rst
Pull Request -
State: closed - Opened by csadorf over 5 years ago
#94 - Improve/update examples
Pull Request -
State: closed - Opened by lyrivera over 5 years ago
- 3 comments
#93 - Raise attribute error when shapedef attribute is None
Pull Request -
State: closed - Opened by lyrivera over 5 years ago
#91 - Revise development docs.
Pull Request -
State: closed - Opened by bdice over 5 years ago
- 1 comment
#90 - Remove formats
Pull Request -
State: closed - Opened by bdice over 5 years ago
#89 - Refactor GSD into a hard/soft dependency
Issue -
State: closed - Opened by bdice over 5 years ago
- 7 comments
Labels: refactor
#88 - Update README.md
Pull Request -
State: closed - Opened by klywang over 5 years ago
- 8 comments
#87 - Update LICENSE.txt
Pull Request -
State: closed - Opened by klywang over 5 years ago
- 4 comments
#86 - Update contributor agreement to match other glotzerlab software.
Pull Request -
State: closed - Opened by bdice over 5 years ago
#85 - Update CONTRIBUTING.md
Pull Request -
State: closed - Opened by klywang over 5 years ago
#84 - Added bumpversion configuration file.
Pull Request -
State: closed - Opened by bdice over 5 years ago
Labels: enhancement
#83 - Parse Polygons in 2D POS files
Pull Request -
State: closed - Opened by bdice over 5 years ago
Labels: enhancement
#82 - Universal reader does not support templates for DCD files
Issue -
State: closed - Opened by klywang over 5 years ago
- 2 comments
Labels: minor, reader
#81 - Fixed logic in test_shapes.
Pull Request -
State: closed - Opened by bdice over 5 years ago
- 4 comments
Labels: bug
#80 - Traj attribute
Pull Request -
State: closed - Opened by klywang over 5 years ago
- 11 comments
#78 - Added image to GSD and getar writer
Pull Request -
State: closed - Opened by klywang over 5 years ago
- 2 comments
#76 - Change Trajectory and Frame API to be consistent with HOOMD conventions
Issue -
State: closed - Opened by klywang over 5 years ago
- 2 comments
Labels: trajectory, refactor
#75 - Add type_ids to Frame class
Issue -
State: closed - Opened by klywang over 5 years ago
- 1 comment
Labels: enhancement, trajectory
#74 - Set frame.types and traj.types to return unique list of ids
Issue -
State: closed - Opened by klywang over 5 years ago
- 1 comment
Labels: trajectory, refactor
#73 - Use data formats and names consistent with HOOMD
Issue -
State: closed - Opened by klywang over 5 years ago
- 8 comments
Labels: enhancement, question, refactor
#71 - Some unsupported properties of specific formats are set to default values
Issue -
State: closed - Opened by lyrivera over 5 years ago
- 5 comments
#70 - Raise attribute error when Trajectory attribute is not set
Issue -
State: closed - Opened by lyrivera over 5 years ago
- 1 comment
#65 - Raise attribute error when frame attributes are None
Pull Request -
State: closed - Opened by lyrivera over 5 years ago
#59 - Drop python2 support
Issue -
State: closed - Opened by lyrivera over 5 years ago
- 2 comments
Labels: enhancement
#57 - shapedef = OrderedDict() instead of None for formats that do not support shape information
Issue -
State: closed - Opened by lyrivera over 5 years ago
- 3 comments
Labels: question
#56 - Review/update examples
Issue -
State: closed - Opened by lyrivera over 5 years ago
- 3 comments
Labels: minor
#54 - gsd reader does not set image attribute
Issue -
State: closed - Opened by klywang over 5 years ago
#47 - Merge develop into master
Pull Request -
State: closed - Opened by lyrivera over 5 years ago
#46 - Docs won't build with cython >=0.29.0
Issue -
State: closed - Opened by bdice over 5 years ago
- 4 comments