Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / glasgowcompbio/PALS issues and pull requests
#49 - Streamlit app does no longer seem to connect to GNPS
Issue -
State: closed - Opened by justinjjvanderhooft 6 months ago
- 1 comment
#48 - Bump streamlit from 0.78.0 to 1.11.1
Pull Request -
State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies
#47 - GNPS analysis throwing non-finite values error
Issue -
State: open - Opened by mita0000 almost 3 years ago
- 1 comment
#46 - GNPS analysis doesn't work
Issue -
State: open - Opened by joewandy over 3 years ago
- 3 comments
Labels: bug
#45 - Parallelise running multiple comparisons
Issue -
State: open - Opened by joewandy over 3 years ago
- 1 comment
Labels: enhancement
#44 - Tidy up PALS output
Issue -
State: open - Opened by joewandy almost 4 years ago
Labels: enhancement
#43 - GNPS command-line analysis
Issue -
State: open - Opened by joewandy almost 4 years ago
Labels: enhancement
#42 - Broken CSV upload in GUI
Issue -
State: closed - Opened by joewandy almost 4 years ago
- 1 comment
Labels: bug
#41 - Incorporate spectrum resolver in molfam / motif analysis?
Issue -
State: open - Opened by joewandy over 4 years ago
- 2 comments
Labels: enhancement
#40 - Add minimum number of hits to pathway analysis
Issue -
State: closed - Opened by joewandy over 4 years ago
- 1 comment
Labels: enhancement
#39 - Add heatmaps for pathways
Issue -
State: closed - Opened by RonanDaly over 4 years ago
- 1 comment
Labels: enhancement, manuscript
#38 - Add example data for MF and Mass2Motif data
Issue -
State: closed - Opened by RonanDaly over 4 years ago
- 3 comments
Labels: manuscript
#37 - PALS error with GNPS FBMN network
Issue -
State: closed - Opened by joewandy over 4 years ago
- 9 comments
Labels: bug
#36 - Read GNPS metadata directly from the zip file
Issue -
State: open - Opened by joewandy over 4 years ago
- 2 comments
Labels: enhancement, manuscript
#35 - Add fold change or PLAGE score to PALS Viewer
Issue -
State: open - Opened by joewandy over 4 years ago
- 1 comment
Labels: enhancement
#34 - Download more data in PALS Viewer
Issue -
State: open - Opened by joewandy over 4 years ago
- 1 comment
Labels: enhancement
#33 - Update readme
Issue -
State: closed - Opened by joewandy over 4 years ago
Labels: documentation, manuscript
#32 - Activity Level Calculation
Issue -
State: closed - Opened by joewandy over 4 years ago
- 1 comment
Labels: bug, question, manuscript
#31 - Google finding wrong canonical url for page
Issue -
State: closed - Opened by RonanDaly over 4 years ago
- 2 comments
#30 - Formatting of very small numbers
Issue -
State: closed - Opened by joewandy over 4 years ago
- 2 comments
Labels: bug, manuscript
#29 - Integrate MS2LDA Analysis to PALS Viewer
Issue -
State: closed - Opened by joewandy over 4 years ago
- 1 comment
Labels: enhancement, manuscript
#28 - Integrate GNPS analysis to PALS Viewer
Issue -
State: closed - Opened by joewandy over 4 years ago
- 1 comment
Labels: enhancement, manuscript
#27 - Sorting by Formula Coverage doesn't work
Issue -
State: closed - Opened by RonanDaly over 4 years ago
- 2 comments
Labels: manuscript
#26 - Setup Neo4j (Reactome) on the server
Issue -
State: closed - Opened by joewandy over 4 years ago
- 2 comments
Labels: manuscript
#25 - Configure SSL on the server
Issue -
State: closed - Opened by joewandy over 4 years ago
- 1 comment
#24 - Add a Run button to PALS Viewer
Issue -
State: open - Opened by joewandy over 4 years ago
- 5 comments
Labels: enhancement, manuscript
#23 - Add GSEA to PALS Viewer
Issue -
State: open - Opened by joewandy over 4 years ago
Labels: bug, manuscript
#22 - User-friendly way to run PALS Viewer locally
Issue -
State: open - Opened by joewandy over 4 years ago
Labels: enhancement
#21 - Dump the latest Reactome database
Issue -
State: closed - Opened by joewandy over 4 years ago
Labels: manuscript
#20 - Create a page for glasgowcompbio.org
Issue -
State: open - Opened by joewandy over 4 years ago
- 1 comment
Labels: manuscript
#19 - Configure nginx on the server
Issue -
State: closed - Opened by joewandy over 4 years ago
- 2 comments
Labels: manuscript
#18 - Correctly start up PALS Viewer on the server
Issue -
State: closed - Opened by joewandy over 4 years ago
- 3 comments
#17 - User guide & general usage instruction
Issue -
State: closed - Opened by joewandy over 4 years ago
- 2 comments
Labels: manuscript
#16 - Add interactive examples
Issue -
State: closed - Opened by joewandy over 4 years ago
- 1 comment
Labels: manuscript
#15 - Update PALS to handle cmpd_ids from a variety of DBs
Issue -
State: open - Opened by kmcluskey over 4 years ago
#14 - Remove pathways with single formula
Issue -
State: closed - Opened by kmcluskey over 4 years ago
- 1 comment
#13 - PALS Package missing dependancies when installed
Issue -
State: closed - Opened by kmcluskey over 4 years ago
- 3 comments
Labels: manuscript
#12 - Update synthetic experiment notebook
Issue -
State: closed - Opened by joewandy almost 5 years ago
#11 - Investigate the effect of varying the PLAGE and hypergeometric components
Issue -
State: closed - Opened by joewandy almost 5 years ago
#10 - Evaluation
Issue -
State: closed - Opened by joewandy almost 5 years ago
- 1 comment
#9 - Download the latest KEGG database
Issue -
State: open - Opened by joewandy almost 5 years ago
#8 - Implements traditional ORA
Issue -
State: closed - Opened by joewandy almost 5 years ago
- 1 comment
#7 - Zero p-values shown in PALS results in PiMP
Issue -
State: open - Opened by joewandy almost 5 years ago
- 1 comment
#6 - Error loading PALS when neo4j user/password is not defined and/or is incorrect
Issue -
State: closed - Opened by RonanDaly almost 5 years ago
#5 - Write README
Issue -
State: closed - Opened by joewandy almost 5 years ago
- 1 comment
#4 - Create a command-line program to run PALS
Issue -
State: closed - Opened by joewandy almost 5 years ago
#3 - Replace the pathway analysis codes in Pimp with this package
Issue -
State: open - Opened by joewandy almost 5 years ago
#2 - Suspicious warning
Issue -
State: open - Opened by joewandy almost 5 years ago
- 2 comments
#1 - neo4j username and password appear to be hard coded.
Issue -
State: closed - Opened by RonanDaly almost 5 years ago