Ecosyste.ms: Issues
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GitHub / ggonnella/gfapy issues and pull requests
#31 - gfapy.error.NotFoundError: A link equivalent to ... does not exist
Issue -
State: open - Opened by MrTomRod 3 months ago
- 1 comment
#30 - Update integer.py to parse integers in exp notation
Pull Request -
State: open - Opened by msgr0 8 months ago
- 1 comment
#29 - Missing coverage information after merge_linear_paths()
Issue -
State: open - Opened by jamiemcg over 1 year ago
#28 - Improve documentation on Methods to access segments, edges, etc. by id
Issue -
State: open - Opened by nhansen over 1 year ago
- 7 comments
#27 - unhashable type: 'SegmentEnd' with `is_cut_segment`
Issue -
State: open - Opened by mir-cat about 2 years ago
#26 - Feature: converting graphs to GFA
Issue -
State: open - Opened by aafshinfard over 2 years ago
- 1 comment
#25 - Optimization: add ability to ignore sequences when loading a GFA file
Issue -
State: open - Opened by fedarko over 2 years ago
- 6 comments
Labels: enhancement
#24 - Setting 'or' tag in merge_linear_paths
Issue -
State: open - Opened by W-L over 2 years ago
- 1 comment
#23 - Taking very long to load GFA1 from file
Issue -
State: closed - Opened by fawaz-dabbaghieh almost 3 years ago
- 4 comments
#22 - 'edge_1+' is not a valid list of GFA1 segment names and orientations
Issue -
State: closed - Opened by schorlton almost 3 years ago
- 7 comments
#21 - Merging on linear paths errors
Issue -
State: closed - Opened by AntoineHo over 3 years ago
- 1 comment
#20 - Merging linear paths : computed sequence length and computed LN differ
Issue -
State: closed - Opened by AntoineHo over 3 years ago
- 2 comments
#19 - conversion between GFA and GFA2 leaves out path tags
Issue -
State: closed - Opened by egoltsman over 3 years ago
- 1 comment
#18 - Possible bug in captured_path.py
Issue -
State: closed - Opened by egoltsman almost 4 years ago
- 4 comments
#17 - Added support for Linux on power
Pull Request -
State: closed - Opened by ujjwalsh about 4 years ago
- 1 comment
#16 - python3 set.append not allowed
Issue -
State: closed - Opened by egoltsman about 4 years ago
- 1 comment
#15 - linear_path error
Issue -
State: closed - Opened by egoltsman about 4 years ago
- 3 comments
#14 - validating paths
Issue -
State: closed - Opened by egoltsman over 4 years ago
- 5 comments
#13 - gfapy.error.FormatError: Custom tags must be lower case
Issue -
State: closed - Opened by Zethson over 4 years ago
- 5 comments
Labels: bug
#12 - Installation issue on Ubuntu 20.04
Issue -
State: closed - Opened by moldach over 4 years ago
- 2 comments
#11 - Supporting rGFA
Issue -
State: closed - Opened by ggonnella over 4 years ago
- 13 comments
Labels: enhancement
#10 - Calling .complement() on GFA2 edges
Issue -
State: closed - Opened by fedarko about 5 years ago
- 3 comments
#9 - Compact the assembly graph [feature request]
Issue -
State: closed - Opened by sjackman almost 6 years ago
- 1 comment
#8 - Add bin/gfapy-renumber
Pull Request -
State: closed - Opened by sjackman almost 6 years ago
#7 - Fill in the sequences in GFA from FASTA
Issue -
State: closed - Opened by sjackman about 6 years ago
- 8 comments
#6 - Fix typos
Pull Request -
State: closed - Opened by jwilk about 7 years ago
#5 - gfa-convert: custom sl:i tag ought to be LN:i
Issue -
State: closed - Opened by sjackman over 7 years ago
- 5 comments
#4 - gfapy-convert: has no identifier Path conversion to GFA2 failed
Issue -
State: closed - Opened by sjackman over 7 years ago
- 2 comments
#3 - gfapy-validate: spurious warning (GFA 1)
Issue -
State: closed - Opened by sjackman over 7 years ago
- 2 comments
#2 - ImportError: cannot import name '_validate_gfa_field'
Issue -
State: closed - Opened by sjackman over 7 years ago
- 4 comments
#1 - Minimum Python version
Issue -
State: closed - Opened by sjackman over 7 years ago
- 2 comments