Ecosyste.ms: Issues

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GitHub / ggirelli/pygpseq issues and pull requests

#25 - Sourcery refactored dev branch

Pull Request - State: closed - Opened by sourcery-ai[bot] over 2 years ago - 1 comment

#24 - v3.4.0

Pull Request - State: closed - Opened by ggirelli over 2 years ago - 1 comment

#23 - Bump jinja2 from 2.10 to 2.11.3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 2 comments
Labels: dependencies

#22 - URGENT: add compatibility with matplotlib>=3.0

Issue - State: open - Opened by ggirelli over 5 years ago
Labels: bug, enhancement

#21 - Better error report and format check in fromfish_merge

Issue - State: open - Opened by ggirelli over 5 years ago
Labels: enhancement

#20 - In gpseq_anim calculate statistics of signal channel per nucleus.

Issue - State: open - Opened by ggirelli over 5 years ago
Labels: enhancement

#19 - Add flexible nuclear selection tool (aim at sub-population selection).

Issue - State: open - Opened by ggirelli over 5 years ago - 1 comment
Labels: enhancement, wontfix

#18 - Crashed for unknown reasons

Issue - State: open - Opened by ggirelli almost 6 years ago - 1 comment
Labels: bug, question, wontfix

#17 - DFE can merge nuclei, add watershed option in tiff_auto3dseg

Issue - State: open - Opened by ggirelli almost 6 years ago - 1 comment
Labels: enhancement, wontfix

#16 - Missing dependencies to czifile and cython packages in setup.py

Issue - State: closed - Opened by ggirelli almost 6 years ago - 1 comment
Labels: bug

#15 - Support for 2D fields in czi/nd2_to_tiff

Issue - State: closed - Opened by ggirelli almost 6 years ago - 2 comments
Labels: enhancement

#14 - Additional options to `tiff_findoof`

Issue - State: closed - Opened by ggirelli almost 6 years ago - 3 comments
Labels: enhancement

#13 - In tiff_splitt, -I has the opposite behaviour from expected.

Issue - State: closed - Opened by ggirelli almost 6 years ago - 1 comment
Labels: invalid

#12 - In tiff_auto3dseg use `gcc.export_settings`.

Issue - State: closed - Opened by ggirelli almost 6 years ago - 1 comment
Labels: enhancement

#11 - Retain nd2 metadata when converting to tiff in `nd2_to_tiff`.

Issue - State: closed - Opened by ggirelli almost 6 years ago - 1 comment
Labels: enhancement

#10 - Clean `tools.binarization` module.

Issue - State: closed - Opened by ggirelli almost 6 years ago - 1 comment
Labels: enhancement, wontfix

#9 - G1 filter in `gpseq_fromfish`

Issue - State: closed - Opened by ggirelli almost 6 years ago - 1 comment
Labels: enhancement, wontfix

#8 - Standardize XYZ coordinate noation

Issue - State: closed - Opened by ggirelli almost 6 years ago - 1 comment
Labels: enhancement, wontfix

#7 - Re-factor for better documentation with python `help()`.

Issue - State: closed - Opened by ggirelli almost 6 years ago - 1 comment
Labels: enhancement, wontfix

#6 - Undocumented warnings

Issue - State: closed - Opened by elgw almost 6 years ago - 1 comment
Labels: question

#5 - double negations are hard for non-super-humans

Issue - State: closed - Opened by elgw almost 6 years ago - 1 comment
Labels: enhancement

#4 - warnings from gpseq_fromfish

Issue - State: closed - Opened by elgw almost 6 years ago - 1 comment
Labels: bug, question

#3 - gpseq_fromfish got stuck at a corrupt image

Issue - State: closed - Opened by elgw about 6 years ago - 1 comment
Labels: enhancement

#2 - Better error message when only one channel tiff is missing

Issue - State: closed - Opened by tomkal about 6 years ago - 1 comment
Labels: enhancement

#1 - Initial Update

Issue - State: closed - Opened by pyup-bot about 7 years ago