Ecosyste.ms: Issues

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GitHub / geoschem/geos-chem issues and pull requests

#2174 - GEOS-Chem .netcdf to .bpch conversion methods

Issue - State: closed - Opened by gouravsaha1995 7 months ago - 2 comments
Labels: question, diagnostics

#2173 - Adding ProdLoss Rate of OH to KPP

Issue - State: closed - Opened by laura-hyesung-yang 7 months ago - 1 comment
Labels: topic: Chemical Mechanisms, category: Debug Help

#2172 - Scaling factors for 3-d (xyz) emissions in HEMCO

Issue - State: closed - Opened by YanshunLi-washu 7 months ago - 8 comments
Labels: category: Question, help needed: Request Input From Community, topic: Input Data, topic: HEMCO Submodule

#2171 - Add CEDS 0.1 x 0.1 degree emissions

Pull Request - State: open - Opened by yantosca 7 months ago - 8 comments
Labels: category: Feature Request, topic: Input Data, topic: Configuration Files, topic: Emissions

#2170 - Obspack start+count exceeds dimension bound error

Issue - State: closed - Opened by alli-moon 7 months ago - 21 comments
Labels: category: Bug, topic: Diagnostics

#2169 - Black carbon radius and density in gravitational settling of stratospheric aerosols

Issue - State: closed - Opened by cbarker211 7 months ago - 4 comments
Labels: bug, KPP / chem mechanisms

#2168 - Update CH4 emissions from EDGARv7 to EDGARv8

Pull Request - State: closed - Opened by nicholasbalasus 7 months ago - 2 comments
Labels: category: Feature Request, topic: Input Data, topic: Carbon Gases Simulations

#2167 - GEOS-CHEM ERROR: Excessive fall velocity ERROR in UCX_mod

Issue - State: closed - Opened by alexzhang-psu 7 months ago - 2 comments
Labels: category: Bug, topic: Runtime Error

#2166 - Remove remaining binary punch diagnostics code

Pull Request - State: closed - Opened by yantosca 7 months ago - 3 comments
Labels: feature, structural

#2164 - Adding ALK4 as SeaFlux species (Extension 101)

Issue - State: closed - Opened by laura-hyesung-yang 7 months ago - 3 comments
Labels: bug, HEMCO, config-files / rundir

#2163 - About the use of parallelism in GEOS-Chem

Issue - State: closed - Opened by yzjiaa 7 months ago - 2 comments
Labels: question, user environment

#2162 - Source of the CO2 restart files?

Issue - State: closed - Opened by garvitagarwal290 7 months ago - 5 comments
Labels: category: Question, topic: Restart Files

#2161 - what's the difference between GEOS-Chem full chemistry simulation and GEOS-Chem "tagged CO" simulation

Issue - State: closed - Opened by XunZhangNJU 8 months ago - 2 comments
Labels: question, specialty simulations

#2160 - Need MERRA 2 meteorology files for 47 vertical layers instead of 72

Issue - State: closed - Opened by gouravsaha1995 8 months ago - 4 comments
Labels: unsupported version

#2159 - Repeated 'Connection time out' while downloading data from geoschemdata.wustl.edu on an HPC

Issue - State: closed - Opened by garvitagarwal290 8 months ago - 1 comment
Labels: data sources / I-O

#2157 - Process contribution to concentration of PM2.5 in GEOS-Chem

Issue - State: closed - Opened by YanshunLi-washu 8 months ago - 13 comments
Labels: category: Question, topic: Diagnostics

#2156 - Is Version v10-01 available?

Issue - State: open - Opened by linguo4 8 months ago - 1 comment
Labels: question, unsupported version

#2156 - Is Version v10-01 available?

Issue - State: closed - Opened by linguo4 8 months ago - 2 comments
Labels: question, unsupported version

#2155 - Fixes to run GEOS-Chem 14.3 in GEOS

Pull Request - State: closed - Opened by lizziel 8 months ago - 3 comments
Labels: interface to external model, bugfix

#2155 - Fixes to run GEOS-Chem 14.3 in GEOS

Pull Request - State: closed - Opened by lizziel 8 months ago - 3 comments
Labels: interface to external model, bugfix

#2154 - Updates for GEOS-Chem 14.3 in CESM

Pull Request - State: closed - Opened by lizziel 8 months ago - 4 comments
Labels: topic: Structural Modifications, no-diff-to-benchmark, category: Interface to External Model, topic: CESM

#2153 - Run directory updates related to GEOS-IT

Pull Request - State: closed - Opened by lizziel 8 months ago - 5 comments
Labels: GCHP, config-files / rundir, no-diff-to-benchmark, bugfix

#2152 - Dryrun issue!

Issue - State: closed - Opened by saskia222 8 months ago - 3 comments
Labels: bug, dry-run

#2151 - Request for an explanation of vertical transport in GEOS-Chem.

Issue - State: closed - Opened by garvitagarwal290 8 months ago - 8 comments
Labels: question, need community input

#2151 - Request for an explanation of vertical transport in GEOS-Chem.

Issue - State: closed - Opened by garvitagarwal290 8 months ago - 6 comments
Labels: question, need community input

#2150 - Issues in getting dependencies on an institute HPC.

Issue - State: closed - Opened by garvitagarwal290 8 months ago - 2 comments
Labels: question, user environment

#2149 - [FEATURE REQUEST] Consider activating additional diagnostics in benchmark simulations

Issue - State: closed - Opened by msulprizio 8 months ago - 1 comment
Labels: category: Feature Request, topic: Benchmarking and Testing

#2148 - 14.1.1 compiles, but 14.2.3 does not

Issue - State: closed - Opened by Row-Bean 8 months ago - 7 comments
Labels: bug, build

#2147 - [FEATURE REQUEST] Require scheduler entry in integration tests

Issue - State: closed - Opened by lizziel 8 months ago - 4 comments
Labels: feature, testing / benchmarking

#2146 - Special species simulation

Issue - State: closed - Opened by ast222340 8 months ago - 1 comment
Labels: question

#2145 - Implement updated timezones file for HEMCO, that better accounts for daylight savings time worldwide

Pull Request - State: closed - Opened by yantosca 8 months ago - 8 comments
Labels: feature, data sources / I-O, HEMCO, config-files / rundir

#2144 - Restore dry deposition output in GCHP & GCClassic fullchem benchmark simulations

Pull Request - State: closed - Opened by yantosca 8 months ago - 14 comments
Labels: category: Feature Request, topic: Diagnostics, topic: Benchmarking and Testing

#2143 - Activate all diagnostics in at least one of the GEOS-Chem integration tests

Issue - State: open - Opened by yantosca 8 months ago
Labels: feature, testing / benchmarking, no-diff-to-benchmark

#2142 - Reduce entries in GCHP HISTORY.rc

Issue - State: closed - Opened by lizziel 8 months ago - 3 comments
Labels: feature, GCHP, never stale, diagnostics, testing / benchmarking

#2141 - How to obtain CO2 emission files of resolution higher than 1x1?

Issue - State: closed - Opened by garvitagarwal290 8 months ago - 3 comments
Labels: topic: Input Data, topic: Carbon Gases Simulations

#2140 - [FEATURE REQUEST] Change GCHP run directory terminology to use raw rather than native

Issue - State: closed - Opened by lizziel 8 months ago - 1 comment
Labels: feature, GCHP, config-files / rundir

#2139 - The DryDep collection is not activated for GCHP fullchem benchmarks

Issue - State: closed - Opened by yantosca 8 months ago - 6 comments
Labels: category: Bug, never stale, topic: Diagnostics, topic: Benchmarking and Testing

#2138 - Run scripts and environment for the Imperial College London HPC

Pull Request - State: closed - Opened by sdeastham 8 months ago - 1 comment
Labels: GCHP, config-files / rundir, no-diff-to-benchmark

#2137 - GEOS-Chem 14.3.0

Pull Request - State: closed - Opened by lizziel 8 months ago - 1 comment

#2136 - Add fixes for TOMAS simulations in GCHP

Pull Request - State: closed - Opened by msulprizio 8 months ago - 3 comments
Labels: GCHP, testing / benchmarking, no-diff-to-benchmark, specialty simulations, bugfix

#2135 - GCHP 14.3.0-rc.0 runs crashing when some diagnostic collections are turned on

Issue - State: closed - Opened by msulprizio 8 months ago - 3 comments
Labels: category: Bug, topic: GCHP, never stale, topic: Benchmarking and Testing

#2134 - Update run directory scripts to get certain restarts from 14.3.0 1-year benchmark output and boundary condition output

Pull Request - State: closed - Opened by yantosca 8 months ago - 2 comments
Labels: feature, config-files / rundir

#2133 - Missing input GEOS-FP met field in 0.125x0.15625 resolution

Issue - State: closed - Opened by xlwangg 8 months ago - 8 comments
Labels: category: Bug, topic: Input Data

#2132 - Can I get 3D budget (in fixed vertical altitude) instead of 2D budget?

Issue - State: closed - Opened by linguo4 8 months ago - 3 comments
Labels: question, stale, diagnostics

#2131 - Diagnostic for GammaN2O5

Issue - State: open - Opened by ktravis213 8 months ago - 1 comment
Labels: category: Feature Request, topic: Chemical Mechanisms, topic: Diagnostics

#2130 - help with solving ncdfUtil bugs while compiling GEOS-Chem V10

Issue - State: closed - Opened by yixinguo0421 9 months ago - 3 comments
Labels: bug, build

#2129 - Question about the HEMCO folder

Issue - State: closed - Opened by Fearlessssssss 9 months ago - 2 comments
Labels: question, documentation

#2128 - A question about how to export species emission files in the same way as species concentration files

Issue - State: closed - Opened by CodeCatLZW 9 months ago - 4 comments
Labels: question, HEMCO, config-files / rundir

#2128 - A question about how to export species emission files in the same way as species concentration files

Issue - State: open - Opened by CodeCatLZW 9 months ago - 3 comments
Labels: question, HEMCO, config-files / rundir

#2127 - Add budget diagnostic option for fixed level vertical region

Pull Request - State: closed - Opened by lizziel 9 months ago - 5 comments
Labels: diagnostics, no-diff-to-benchmark

#2126 - Issue with aerosol pH in nested simulation

Issue - State: closed - Opened by ktravis213 9 months ago - 3 comments
Labels: bug, stale, diagnostics

#2126 - Issue with aerosol pH in nested simulation

Issue - State: open - Opened by ktravis213 9 months ago - 1 comment
Labels: bug, diagnostics

#2125 - EDGARv7 and EDGARv6_SF files are incompatible with GCHP (plus other files)

Issue - State: closed - Opened by yantosca 9 months ago - 6 comments
Labels: category: Bug, topic: GCHP, topic: Input Data, topic: Carbon Gases Simulations

#2124 - 14.1.1,Is the official restart file only for "global region"?

Issue - State: closed - Opened by Hugh-Su 9 months ago - 2 comments
Labels: question, restarts

#2123 - 14.1.1

Issue - State: closed - Opened by Hugh-Su 9 months ago
Labels: category: Question

#2122 - How to remove the contribution of isoprene from biogenic source and NO_x from fertilizer from soil in a simulation?

Issue - State: open - Opened by cespinosa 9 months ago - 3 comments
Labels: research / science problem, question, data sources / I-O, config-files / rundir, stale

#2121 - Unusual High value around Lake Chad

Issue - State: closed - Opened by jiaying002 9 months ago - 4 comments
Labels: bug, GCAP2 meterorology

#2120 - Photolysis rate of NO2 (jNO2)

Issue - State: closed - Opened by ks3506 9 months ago - 3 comments
Labels: question

#2119 - Ozone Simulation Always Errors in April

Issue - State: closed - Opened by cj2262 9 months ago - 2 comments
Labels: research / science problem

#2118 - OFFLINE_LIGHTNING after 2022 is absent in the washu server.

Issue - State: closed - Opened by PowderL 9 months ago - 4 comments
Labels: category: Bug, topic: Input Data

#2117 - Issues with updating new emission inventories

Issue - State: open - Opened by jinlx 9 months ago - 10 comments
Labels: category: Bug, topic: Configuration Files, topic: Emissions

#2116 - Tomas fixes to address failure to integrate in dev/14.3.0

Pull Request - State: closed - Opened by BettyCroft 9 months ago - 9 comments
Labels: testing / benchmarking, bugfix

#2115 - Need to update incorrect EDGARv7 entries in HEMCO_Config.rc and ExtData.rc for the carbon, CH4, and tagCH4 simulations

Issue - State: closed - Opened by yantosca 9 months ago - 5 comments
Labels: category: Bug, topic: HEMCO Submodule, topic: Configuration Files, topic: Emissions

#2114 - Missing GEOS_0.5x0.625 MERRA2 data in 2023-10-04

Issue - State: closed - Opened by jjp1987 9 months ago - 2 comments
Labels: category: Bug, topic: Input Data

#2113 - Forced exit from Rosenbrock error due to the step size too small

Issue - State: closed - Opened by herizonarivelo 9 months ago - 3 comments
Labels: category: Bug, topic: Chemical Mechanisms, stale, topic: Runtime Error

#2112 - CH4 hydropower emission files are incompatible with GCHP

Issue - State: closed - Opened by yantosca 9 months ago - 2 comments
Labels: bug, GCHP, data sources / I-O, no-diff-to-benchmark, specialty simulations

#2110 - GCHP integration tests failing for 14.3.0-alpha.6

Issue - State: closed - Opened by msulprizio 9 months ago - 1 comment
Labels: category: Bug, topic: Benchmarking and Testing

#2109 - Limit Cloud-J initialization prints to single core

Pull Request - State: closed - Opened by lizziel 9 months ago
Labels: no-diff-to-benchmark

#2108 - Are there estimates of how long a simulation takes for a given resolution, number of compute cores etc?

Issue - State: closed - Opened by garvitagarwal290 9 months ago - 11 comments
Labels: question, performance / parallelization

#2107 - GEOS-CHEM ERROR running Full-chemistry with GCAP2.0

Issue - State: closed - Opened by Racha711 9 months ago - 4 comments
Labels: bug, KPP / chem mechanisms, stale, runtime, GCAP2 meterorology

#2106 - Merge no-diff-to-benchmark updates into the 14.3.0 development stream

Pull Request - State: closed - Opened by yantosca 9 months ago - 1 comment
Labels: no-diff-to-benchmark

#2105 - Agricultural NOx double counting

Issue - State: closed - Opened by ayhwong 9 months ago - 4 comments
Labels: category: Bug, topic: Input Data, topic: HEMCO Submodule, stale, topic: Diagnostics, topic: Emissions

#2104 - Fix additional memory leaks in GEOS-Chem

Pull Request - State: closed - Opened by yantosca 9 months ago - 2 comments
Labels: memory, bugfix

#2103 - Capture all tropopause and PBL height changes in budget diagnostics

Pull Request - State: open - Opened by lizziel 9 months ago - 14 comments
Labels: category: Feature Request, topic: Diagnostics

#2102 - Memory leaks in 14.3.0 development code

Issue - State: closed - Opened by yantosca 9 months ago - 4 comments
Labels: bug, stale, memory, deferred

#2101 - Adding a new species (methanediol) to GEOS-Chem

Issue - State: closed - Opened by laura-hyesung-yang 9 months ago - 5 comments
Labels: bug, config-files / rundir, runtime

#2100 - Replace "huce_intel" with "huce_cascade" in Harvard Cannon sample run scripts

Pull Request - State: closed - Opened by yantosca 9 months ago - 1 comment
Labels: feature, config-files / rundir, no-diff-to-benchmark

#2100 - Replace "huce_intel" with "huce_cascade" in Harvard Cannon sample run scripts

Pull Request - State: open - Opened by yantosca 9 months ago
Labels: feature, config-files / rundir, no-diff-to-benchmark

#2099 - GEOS-CF: Guidance on comparing "pm25_rh35_gcc" with measurements

Issue - State: closed - Opened by tanksnr 9 months ago - 2 comments

#2098 - Modify the initial and boundary conditions of meteorological fields of MERRA-2 input for sensitivity simulations

Issue - State: closed - Opened by inku0120 9 months ago - 7 comments
Labels: research / science problem, question, data sources / I-O

#2098 - Modify the initial and boundary conditions of meteorological fields of MERRA-2 input for sensitivity simulations

Issue - State: open - Opened by inku0120 9 months ago - 5 comments
Labels: research / science problem, question, data sources / I-O

#2097 - another website question

Issue - State: closed - Opened by lmickley 9 months ago

#2096 - [WIP] Change units of `Loss_Ox` diagnostic from molec/cm3/s to unitless (to fix an issue in tagO3 simulations)

Pull Request - State: closed - Opened by yantosca 9 months ago - 2 comments
Labels: diagnostics, specialty simulations, bugfix, math / units

#2095 - Increase time limits for GCHP integration tests

Pull Request - State: closed - Opened by yantosca 9 months ago - 2 comments
Labels: GCHP, testing / benchmarking, no-diff-to-benchmark, bugfix

#2094 - Issue with units of O3 loss in tagged simulation

Issue - State: open - Opened by ncolombi 9 months ago - 11 comments
Labels: category: Bug, topic: Diagnostics, topic: Math and Units, topic: TagO3 Simulations

#2094 - Issue with units of O3 loss in tagged simulation

Issue - State: open - Opened by ncolombi 9 months ago - 11 comments
Labels: category: Bug, topic: Diagnostics, topic: Math and Units, topic: TagO3 Simulations

#2093 - Corrupted offline biovoc, soilnox, seasalt files for 1/20/2022 at geoschemdata.wustl.edu

Issue - State: closed - Opened by yantosca 9 months ago - 4 comments
Labels: category: Bug, topic: Input Data

#2093 - Corrupted offline biovoc, soilnox, seasalt files for 1/20/2022 at geoschemdata.wustl.edu

Issue - State: closed - Opened by yantosca 9 months ago - 4 comments
Labels: category: Bug, topic: Input Data

#2092 - Added new emission not being written in HEMCO_diagnostics

Issue - State: closed - Opened by lijimdavid 9 months ago - 5 comments
Labels: bug, HEMCO, diagnostics

#2091 - editing group webpage

Issue - State: closed - Opened by lmickley 9 months ago - 1 comment

#2090 - Missing GEOS_FP data from geoschemdata.wustl.edu

Issue - State: closed - Opened by jaeinjeong 9 months ago - 2 comments
Labels: category: Bug, topic: Input Data

#2089 - Feature request: Update documentation for GEOS-Chem Classic nested-grid simulations

Issue - State: closed - Opened by yantosca 10 months ago - 2 comments
Labels: feature, documentation, nested grid simulation

#2088 - O3 budget calculation with GCpy

Issue - State: closed - Opened by zhaojunri1020 10 months ago - 3 comments
Labels: question

#2087 - Which meteorological field does GEOS-Chem use for (dry) convection?

Issue - State: closed - Opened by garvitagarwal290 10 months ago - 6 comments
Labels: question, data sources / I-O

#2086 - Global O3 budget calculation with GCpy

Issue - State: closed - Opened by zhaojunri1020 10 months ago

#2085 - Allocation error while running GEOS-Chem 14.2.3

Issue - State: closed - Opened by mulgamulgi33 10 months ago - 2 comments
Labels: bug, build

#2084 - Use rundir (not absolute path) to select the executable file for integration and parallel tests

Pull Request - State: closed - Opened by yantosca 10 months ago - 3 comments
Labels: testing / benchmarking, no-diff-to-benchmark, bugfix