geoschem/geos-chem issues and pull requests

#2410 - Add tropopause pressure to the GEOS-Chem Classic "SatDiagn" collection

Pull Request - State: closed - Opened by yantosca about 2 months ago - 2 comments
Labels: category: Feature Request, topic: Diagnostics, no-diff-to-benchmark

#2409 - Discrepancy of mass between HEMCO and SpeciesConc output in CH4 simulation

Issue - State: closed - Opened by ohsangik98 about 2 months ago - 14 comments
Labels: category: Bug, topic: Carbon Gases Simulations

#2408 - KPP giving a segfault during build_mechanism.sh

Issue - State: open - Opened by JFBrewer 2 months ago - 2 comments
Labels: category: Bug, topic: Chemical Mechanisms

#2408 - KPP giving a segfault during build_mechanism.sh

Issue - State: open - Opened by JFBrewer 2 months ago - 2 comments
Labels: category: Bug, topic: Chemical Mechanisms

#2407 - Add tropopause level to satellite diagnostic SatDiagn

Issue - State: closed - Opened by eamarais 2 months ago - 2 comments
Labels: category: Feature Request, topic: Diagnostics

#2407 - Add tropopause level to satellite diagnostic SatDiagn

Issue - State: closed - Opened by eamarais 2 months ago - 2 comments
Labels: category: Feature Request, topic: Diagnostics

#2406 - Dry deposition diagnostics of deposition velocities calculated in HEMCO and drydep_mod

Issue - State: open - Opened by eamarais 2 months ago
Labels: category: Feature Request, TODO: Documentation, topic: Deposition

#2405 - Inquiry Regarding Modification of Marine Primary Organic Aerosol (POA) Calculation and Data Abbreviations

Issue - State: closed - Opened by ChenBHXMU 2 months ago - 8 comments
Labels: category: Question, topic: Chemical Mechanisms

#2404 - GC-Classic can only be run starting at midnight or 3-hr intervals thereafter

Issue - State: open - Opened by lizziel 2 months ago - 2 comments
Labels: category: Bug, topic: Configuration Files

#2403 - Store aerosol *.dat files in new data directory CHEM_INPUTS/Aerosol_Optics

Issue - State: closed - Opened by lizziel 2 months ago - 2 comments
Labels: category: Feature Request, topic: Input Data

#2403 - Store aerosol *.dat files in new data directory CHEM_INPUTS/Aerosol_Optics

Issue - State: open - Opened by lizziel 2 months ago - 1 comment
Labels: category: Feature Request, topic: Input Data

#2402 - Fixes for HEMCO diagnostic config file HEMCO_Diagn.rc

Pull Request - State: open - Opened by lizziel 2 months ago - 3 comments
Labels: topic: Diagnostics, category: Bug Fix, topic: Emissions

#2402 - Fixes for HEMCO diagnostic config file HEMCO_Diagn.rc

Pull Request - State: closed - Opened by lizziel 2 months ago - 7 comments
Labels: topic: Diagnostics, category: Bug Fix, topic: Emissions

#2401 - Corrupted biovoc_05.20230701.nc data at WashU

Issue - State: closed - Opened by nicodgomez 2 months ago - 6 comments
Labels: category: Bug, topic: Input Data

#2401 - Corrupted biovoc_05.20230701.nc data at WashU

Issue - State: closed - Opened by nicodgomez 2 months ago - 6 comments
Labels: category: Bug, topic: Input Data

#2400 - Section Type Conflict When Defining Lots of ProdLoss Groups

Issue - State: open - Opened by AlfredMayhew 2 months ago - 8 comments
Labels: category: Bug, topic: Chemical Mechanisms

#2400 - Section Type Conflict When Defining Lots of ProdLoss Groups

Issue - State: open - Opened by AlfredMayhew 2 months ago - 8 comments
Labels: category: Bug, topic: Chemical Mechanisms

#2399 - Add simulation with all diagnostics turned to integration testing

Pull Request - State: closed - Opened by msulprizio 2 months ago - 12 comments
Labels: topic: Benchmarking and Testing, no-diff-to-benchmark

#2398 - Pass non-zero Ca2, Mg, and K cations to HETP

Pull Request - State: closed - Opened by lizziel 2 months ago - 6 comments
Labels: category: Feature Request, Attn: Aerosols WG, topic: Aerosols

#2398 - Pass non-zero Ca2, Mg, and K cations to HETP

Pull Request - State: closed - Opened by lizziel 2 months ago - 5 comments
Labels: category: Feature Request, Attn: Aerosols WG, topic: Aerosols

#2397 - Add GC-Classic transport tracer global half-degree run option with GEOS-IT

Pull Request - State: closed - Opened by lizziel 2 months ago - 2 comments
Labels: category: Feature Request, no-diff-to-benchmark, topic: Run Directories

#2397 - Add GC-Classic transport tracer global half-degree run option with GEOS-IT

Pull Request - State: closed - Opened by lizziel 2 months ago - 2 comments
Labels: category: Feature Request, no-diff-to-benchmark, topic: Run Directories

#2396 - How to solve Program received signal SIGSEGV: Segmentation fault - invalid memory reference.

Issue - State: closed - Opened by ChenBHXMU 2 months ago - 4 comments
Labels: topic: Configuration Files, topic: Restart Files, category: Debug Help

#2395 - How to set specify reading the restart file every month by setting the timestamp in HEMCO_Config.rc?

Issue - State: open - Opened by XunZhangNJU 2 months ago - 1 comment
Labels: category: Question, topic: Restart Files

#2394 - Add ModelE2.1 (GCAP 2.0) simulation to GCClassic integration tests

Pull Request - State: closed - Opened by msulprizio 2 months ago - 8 comments
Labels: category: Feature Request, topic: Benchmarking and Testing, topic: GCAP2 Meteorology

#2393 - question on file sizes/types for MERRA2 at wustl for 2023

Issue - State: closed - Opened by aschuh 2 months ago - 2 comments
Labels: category: Question, topic: Input Data

#2392 - BAT-VBS model in GEOS-Chem

Issue - State: open - Opened by msulprizio 3 months ago
Labels: category: Feature Request, Attn: Aerosols WG, topic: Aerosols

#2391 - Comment back in Ca, Mg, and K cations in aerosol thermodynamics

Issue - State: open - Opened by msulprizio 3 months ago - 11 comments
Labels: category: Feature Request, Attn: Aerosols WG, topic: Aerosols

#2390 - Emissions of new species (ALK6, C4H6, EBZ, STYR, TMB) from fires and anthropogenic emission

Issue - State: closed - Opened by msulprizio 3 months ago - 1 comment
Labels: category: Feature Request, topic: Emissions

#2389 - Dry deposition to F90 to improve readability, expand diagnostics

Issue - State: open - Opened by msulprizio 3 months ago
Labels: category: Feature Request, topic: Deposition

#2388 - GEUFE fire emissions for the eastern US at daily 0.25° resolution (2019-2020)

Issue - State: open - Opened by msulprizio 3 months ago
Labels: category: Feature Request, topic: Emissions

#2388 - GEUFE fire emissions for the eastern US at daily 0.25° resolution (2019-2020)

Issue - State: open - Opened by msulprizio 3 months ago
Labels: category: Feature Request, Attn: Emissions WG, topic: Emissions

#2387 - Retire CH4, CO2, tagCO simulations in favor of carbon simulation

Issue - State: open - Opened by msulprizio 3 months ago - 3 comments
Labels: category: Feature Request, topic: Carbon Gases Simulations

#2387 - Retire CH4, CO2, tagCO simulations in favor of carbon simulation

Issue - State: open - Opened by msulprizio 3 months ago - 3 comments
Labels: category: Feature Request, topic: Carbon Gases Simulations

#2386 - Update to Cloud-J v8.0 in GEOS-Chem

Issue - State: closed - Opened by lizziel 3 months ago - 1 comment
Labels: category: Feature Request

#2385 - NEP in CO2 simulation

Issue - State: closed - Opened by ymxu-atm 3 months ago - 4 comments
Labels: category: Question, topic: Configuration Files, topic: Carbon Gases Simulations

#2384 - Why MBOX concentrations showed up in non-NA regions?

Issue - State: closed - Opened by EnyuxPolyU 3 months ago - 5 comments
Labels: topic: Chemical Mechanisms, category: Debug Help, topic: Emissions

#2383 - Spin-up simulation immediately stops after time stepping begins

Issue - State: open - Opened by alphasue12 3 months ago - 6 comments
Labels: topic: User Environment, topic: Runtime Error, category: Debug Help

#2382 - EmisDST[N]_Natural not populated when changing from offline dust emissions to online

Issue - State: closed - Opened by sdeastham 3 months ago - 4 comments
Labels: category: Bug, TODO: Documentation

#2381 - KPP integration failed in Carbon simulation type for GEOS-Chem 14.2.3.

Issue - State: open - Opened by jjp1987 3 months ago - 2 comments
Labels: topic: Chemical Mechanisms, topic: Runtime Error, category: Debug Help, topic: Carbon Gases Simulations

#2381 - KPP integration failed in Carbon simulation type for GEOS-Chem 14.2.3.

Issue - State: open - Opened by jjp1987 3 months ago - 3 comments
Labels: topic: Chemical Mechanisms, topic: Runtime Error, category: Debug Help, topic: Carbon Gases Simulations

#2380 - Disallow legacy FAST-JX unless using mercury simulation

Pull Request - State: closed - Opened by lizziel 3 months ago - 1 comment
Labels: topic: Chemical Mechanisms, category: Interface to External Model

#2380 - Disallow legacy FAST-JX unless using mercury simulation

Pull Request - State: closed - Opened by lizziel 3 months ago - 1 comment
Labels: topic: Chemical Mechanisms, category: Interface to External Model

#2379 - Disable support for FAST-JX except for the Hg simulation

Pull Request - State: closed - Opened by yantosca 3 months ago - 3 comments
Labels: topic: Chemical Mechanisms, topic: Structural Modifications, no-diff-to-benchmark, category: Bug Fix

#2379 - Disable support for FAST-JX except for the Hg simulation

Pull Request - State: closed - Opened by yantosca 3 months ago - 3 comments
Labels: topic: Chemical Mechanisms, topic: Structural Modifications, no-diff-to-benchmark, category: Bug Fix

#2378 - Is the 'Photolysis reactions' section of 'Update chemical mechanisms with KPP' out of date?

Issue - State: closed - Opened by bethkillen 3 months ago - 3 comments
Labels: category: Question, TODO: Documentation

#2378 - Is the 'Photolysis reactions' section of 'Update chemical mechanisms with KPP' out of date?

Issue - State: closed - Opened by bethkillen 3 months ago - 3 comments
Labels: category: Question, TODO: Documentation

#2377 - forrtl: severe (174): SIGSEGV, segmentation fault occurred

Issue - State: open - Opened by ycyeongi 3 months ago - 1 comment
Labels: topic: Runtime Error, unsupported version, category: Debug Help

#2376 - What does xyL * mean in HEMCO_Cnfig.rc?

Issue - State: closed - Opened by helpyuan 3 months ago - 7 comments
Labels: category: Question, TODO: Documentation, topic: HEMCO Submodule, topic: Configuration Files

#2375 - Update standard emissions in CESM to match standard model

Pull Request - State: closed - Opened by lizziel 3 months ago - 5 comments
Labels: category: Interface to External Model, topic: CESM

#2374 - Modify fullchem

Issue - State: open - Opened by yangning-code 3 months ago - 4 comments
Labels: category: Question, topic: Chemical Mechanisms

#2373 - If I want to turn ON daily (GFED_daily) GFED fires, do I need to turn OFF monthly (GFED4) inside the HEMCO_Config.rc?

Issue - State: closed - Opened by Hemrajbhattarai 3 months ago - 3 comments
Labels: category: Question, topic: Configuration Files, topic: Emissions

#2372 - Turn off the MEGAN extension for fullchem "non-benchmark" simulations

Pull Request - State: closed - Opened by yantosca 3 months ago - 4 comments
Labels: topic: Configuration Files, no-diff-to-benchmark, category: Bug Fix, topic: Run Directories

#2371 - Adding PPN photolysis

Pull Request - State: closed - Opened by bexhorner 3 months ago - 12 comments
Labels: category: Feature Request, topic: Chemical Mechanisms

#2370 - Future emissions in GEOS-Chem - RCP unusable

Issue - State: closed - Opened by r-pound 3 months ago - 3 comments
Labels: category: Bug, topic: Input Data

#2369 - Fix several issues with the GEOS-Chem Classic satellite diagnostics (SatDiagn and SatDiagnEdge collections)

Pull Request - State: closed - Opened by yantosca 3 months ago - 2 comments
Labels: topic: Diagnostics, category: Bug Fix

#2368 - Satellite Diagnostic not currently compatible with Carbon Simulation

Issue - State: closed - Opened by JFBrewer 3 months ago - 5 comments
Labels: category: Bug, topic: Diagnostics, topic: Carbon Gases Simulations

#2367 - Integrator error code : -5, STOP at INTEGRATE_KPP

Issue - State: open - Opened by zkkk0218 3 months ago - 3 comments
Labels: category: Bug, unsupported version

#2366 - Changes for coupling GEOS-Chem to CESM in Spectral-element Dynamical Core (CAM-SE)

Pull Request - State: closed - Opened by jimmielin 3 months ago - 1 comment
Labels: category: Interface to External Model, topic: CESM

#2365 - NO2 simulation in GEOS-Chem

Issue - State: closed - Opened by helpyuan 3 months ago - 1 comment
Labels: category: Question, duplicate

#2364 - NO2 simulation in GEOS-Chem

Issue - State: closed - Opened by helpyuan 3 months ago - 4 comments
Labels: category: Question, topic: Chemical Mechanisms, topic: Emissions

#2363 - Update setCommonRunSettings.sh.template to avoid incorrect GCHP error catch

Pull Request - State: closed - Opened by ltmurray 3 months ago - 4 comments
Labels: topic: GCHP, category: Bug Fix, topic: Run Directories

#2362 - GFAS issue with Complex SOA scheme for POG variables

Issue - State: open - Opened by Mashiat25 3 months ago - 1 comment
Labels: category: Bug, topic: Configuration Files, topic: Emissions

#2361 - MCHgMAP geogenic and biomass burning Hg emissions

Issue - State: open - Opened by yantosca 3 months ago
Labels: category: Feature Request, topic: Hg or POPs simulations

#2360 - [WIP] Changes for coupling GEOS-Chem to CESM in Spectral-element Dynamical Core (CAM-SE)

Pull Request - State: closed - Opened by jimmielin 3 months ago - 1 comment

#2359 - Allow per-species definition of KPP absolute and relative solver tolerances; Set absolute tolerances of dummy species to large value

Pull Request - State: closed - Opened by yantosca 3 months ago - 13 comments
Labels: topic: Chemical Mechanisms, category: Bug Fix

#2359 - Allow per-species definition of KPP absolute and relative solver tolerances; Set absolute tolerances of dummy species to large value

Pull Request - State: closed - Opened by yantosca 3 months ago - 13 comments
Labels: topic: Chemical Mechanisms, category: Bug Fix

GitHub / geoschem/geos-chem issues and pull requests