geoschem/geos-chem issues and pull requests

#2493 - Use ALK6 species name for >= C6 alkanes instead of ALK7

Pull Request - State: open - Opened by msulprizio 2 days ago - 1 comment
Labels: topic: Chemical Mechanisms

#2492 - GCHP carbon simulation fixes

Pull Request - State: open - Opened by lizziel 2 days ago
Labels: topic: GCHP, category: Bug Fix, topic: Carbon Gases Simulations

#2491 - How can I obtain the drydep and WetLoss of Silicon species in the diagnostic result?

Issue - State: open - Opened by herizonarivelo 6 days ago - 3 comments
Labels: category: Bug, topic: Diagnostics

#2490 - Clean up CHANGELOG.md for 14.5.0 release

Pull Request - State: open - Opened by msulprizio 3 days ago
Labels: no-diff-to-benchmark

#2489 - Fix a bug in coarse-mode seasalt Ca, Mg, and K

Pull Request - State: open - Opened by yc-chan 3 days ago - 3 comments
Labels: category: Bug Fix, topic: Aerosols

#2488 - How to archive the rates of each reaction in GEOS-Chem

Issue - State: open - Opened by lshen2009 4 days ago - 2 comments
Labels: category: Question, topic: Diagnostics

#2487 - Inquiry on Geos-Chem-APM Usage

Issue - State: open - Opened by ChenBHXMU 5 days ago - 2 comments
Labels: category: Question, topic: Aerosols

#2486 - Prevent segmentation fault in qfyaml with some compilers

Pull Request - State: open - Opened by lizziel 6 days ago - 1 comment
Labels: category: Bug, topic: Runtime Error

#2485 - The program encountered an error during execution.

Issue - State: open - Opened by ChenBHXMU 7 days ago - 3 comments
Labels: topic: Build, category: Question

#2484 - The missing files: Regions_land.dat and Regions_ocean.dat

Issue - State: open - Opened by rippleofheart 7 days ago - 3 comments
Labels: category: Bug, topic: Carbon Gases Simulations

#2483 - KPP Standalone from Obin Sturm

Pull Request - State: open - Opened by lizziel 7 days ago
Labels: category: Feature Request, topic: Chemical Mechanisms, no-diff-to-benchmark, Topic: Fullchem Simulations

#2482 - KPP standalone interface from Obin Sturm

Pull Request - State: open - Opened by lizziel 7 days ago - 5 comments
Labels: category: Feature Request, topic: Chemical Mechanisms, no-diff-to-benchmark, Topic: Fullchem Simulations

#2481 - GEOS-FP data missing in GEOS_0.125x0.15625_AS

Issue - State: open - Opened by xlwangg 7 days ago - 8 comments
Labels: category: Bug, topic: Input Data

#2480 - Aerosol-only mode using Sulfate_mod to calculate a new SO2 specie

Issue - State: open - Opened by CraigYEUNG 8 days ago - 1 comment
Labels: category: Bug

#2480 - Aerosol-only mode using Sulfate_mod to calculate a new SO2 specie

Issue - State: closed - Opened by CraigYEUNG 8 days ago - 2 comments
Labels: category: Bug

#2479 - How to add other substances to CH4 simulation?

Issue - State: open - Opened by Liyl2 8 days ago - 1 comment
Labels: category: Question, topic: Carbon Gases Simulations

#2478 - Satellite diagnostic simulations show a gradual decrease in pressure day by day

Issue - State: closed - Opened by zpleo 8 days ago - 1 comment
Labels: category: Question, duplicate

#2477 - Bug fix for double counting CH4 agricultural burning emissions

Pull Request - State: closed - Opened by msulprizio 9 days ago - 1 comment
Labels: category: Bug Fix, topic: Carbon Gases Simulations

#2476 - Agricultural burning emissions are double counted for CH4

Issue - State: closed - Opened by msulprizio 9 days ago - 1 comment
Labels: category: Bug, topic: Carbon Gases Simulations

#2476 - Agricultural burning emissions are double counted for CH4

Issue - State: open - Opened by msulprizio 9 days ago
Labels: category: Bug, topic: Carbon Gases Simulations

#2475 - How to fix CH4 lifetime in GEOS Chem CH4 simulation？

Issue - State: open - Opened by XunZhangNJU 9 days ago - 3 comments
Labels: category: Question, topic: Chemical Mechanisms, topic: Carbon Gases Simulations

#2475 - How to fix CH4 lifetime in GEOS Chem CH4 simulation？

Issue - State: open - Opened by XunZhangNJU 9 days ago - 3 comments
Labels: category: Question, topic: Chemical Mechanisms, topic: Carbon Gases Simulations

#2474 - MERRA2 .20170101.I3.4x5.nc4 - Cannot get field PS_NEXTDAY

Issue - State: closed - Opened by Naaimaben 9 days ago - 4 comments
Labels: category: Bug, topic: Input Data, topic: Configuration Files

#2474 - MERRA2 .20170101.I3.4x5.nc4 - Cannot get field PS_NEXTDAY

Issue - State: closed - Opened by Naaimaben 9 days ago - 4 comments
Labels: category: Bug, topic: Input Data, topic: Configuration Files

#2473 - Add seasonality to CH4 reservoir emissions

Pull Request - State: closed - Opened by msulprizio 9 days ago - 1 comment
Labels: category: Feature Request, topic: Carbon Gases Simulations

#2472 - Bugfix: Restore stale workflow functionality

Pull Request - State: closed - Opened by msulprizio 9 days ago
Labels: category: Bug Fix, topic: GitHub

#2471 - Nucleation in TOMAS

Issue - State: open - Opened by 1392403848 10 days ago - 5 comments
Labels: category: Question, Attn: Aerosols WG, topic: Aerosols

#2471 - nucleation

Issue - State: open - Opened by 1392403848 10 days ago
Labels: category: Question

#2470 - Simulating the global distribution of SO3

Issue - State: open - Opened by 1392403848 10 days ago - 5 comments
Labels: category: Question, topic: Configuration Files, topic: Runtime Error

#2469 - Input convective precipitation flux is zero in GEOS-FP (6/2020+) and GEOS-IT

Issue - State: open - Opened by lizziel 13 days ago - 7 comments
Labels: category: Bug, topic: Input Data

#2469 - Input convective precipitation flux is zero in GEOS-FP (6/2020+) and GEOS-IT

Issue - State: open - Opened by lizziel 13 days ago - 5 comments
Labels: category: Bug, topic: Input Data

#2468 - kpp: error while loading shared libraries: libfl.so.2: cannot open shared object file

Issue - State: open - Opened by zpleo 14 days ago
Labels: category: Bug

#2468 - kpp: error while loading shared libraries: libfl.so.2: cannot open shared object file

Issue - State: closed - Opened by zpleo 14 days ago
Labels: category: Bug

#2467 - Fix dry mass fraction of seasalt in aerosol thermodynamics

Pull Request - State: closed - Opened by lizziel 14 days ago - 1 comment
Labels: category: Bug Fix, topic: Aerosols

#2466 - Satellite diagnostic simulations show a gradual decrease in pressure day by day

Issue - State: open - Opened by zpleo 15 days ago - 7 comments
Labels: category: Bug, topic: Diagnostics

#2465 - How to use climatological met data (using 1 year for multi-year)

Issue - State: open - Opened by aschuh 15 days ago - 1 comment
Labels: category: Question

#2464 - Remove J-value diagnostics which are all zero

Pull Request - State: closed - Opened by lizziel 16 days ago - 1 comment
Labels: category: Bug, topic: Diagnostics

#2463 - Differences in CO2 between carbon simulation and CO2 simulation

Issue - State: open - Opened by msulprizio 20 days ago - 1 comment
Labels: category: Bug, never stale, topic: Carbon Gases Simulations

#2462 - Bug fix: ALK6 in HEMCO_Config.rc should be ALK7

Pull Request - State: closed - Opened by msulprizio 20 days ago - 3 comments
Labels: category: Bug Fix

#2462 - Bug fix: ALK6 in HEMCO_Config.rc should be ALK7

Pull Request - State: closed - Opened by msulprizio 20 days ago - 3 comments
Labels: category: Bug Fix

#2461 - Question about recent GEOS-FP data files

Issue - State: open - Opened by ChangpeiHe 21 days ago - 9 comments
Labels: category: Question, topic: Input Data

#2460 - Incomplete Program Execution

Issue - State: open - Opened by ChenBHXMU 21 days ago - 1 comment
Labels: category: Question, topic: Diagnostics, topic: Runtime Error

#2459 - Inconsistency in species defined in GEOS-Chem and HEMCO config following pull request #2318

Issue - State: closed - Opened by msulprizio 22 days ago - 5 comments
Labels: category: Bug

#2458 - A very stubborn bug when "make -j",please help me

Issue - State: open - Opened by Leonardchenll 22 days ago - 3 comments
Labels: category: Bug

#2457 - Update `Is_Photolysis` tags in `species_database.yml` to be consistent with Cloud-J file `FJX_j2j.dat`

Pull Request - State: closed - Opened by yantosca 23 days ago - 4 comments
Labels: topic: Configuration Files, topic: Chemical Mechanisms, category: Bug Fix, topic: Photolysis

#2456 - Inconsistencies between photolysis species listed in `species_database.yml` and `FJX_j2j.dat` for fullchem mechanism

Issue - State: closed - Opened by yantosca 23 days ago - 12 comments
Labels: category: Bug, topic: Configuration Files, topic: Chemical Mechanisms, topic: Photolysis

#2455 - ERROR: KPP integration failed

Issue - State: closed - Opened by InterstellarPenguin 27 days ago - 2 comments
Labels: category: Bug, topic: Chemical Mechanisms, topic: Runtime Error

#2454 - SLURM script returning segmentation fault error and missing HEMCO data

Issue - State: open - Opened by bcraig99 27 days ago - 8 comments
Labels: topic: Nested Grid Simulation, topic: Runtime Error, category: Debug Help

#2453 - FJX earth radius legacy constant?

Issue - State: open - Opened by barronh 28 days ago - 6 comments
Labels: category: Bug, topic: Math and Units

#2452 - Bug fix: Reorder photo rxns for PNs and ANs (from PR #2318)

Pull Request - State: closed - Opened by yantosca 28 days ago - 5 comments
Labels: category: Bug Fix, topic: Photolysis

#2451 - SO3 generating H2SO4

Issue - State: open - Opened by 1392403848 29 days ago - 1 comment
Labels: topic: Chemical Mechanisms, topic: Runtime Error, category: Debug Help

#2451 - SO3 generating H2SO4

Issue - State: open - Opened by 1392403848 29 days ago - 1 comment
Labels: topic: Chemical Mechanisms, topic: Runtime Error, category: Debug Help

#2450 - Error occurred when adding MEIC inventory to HEMCO

Issue - State: open - Opened by fang159753 29 days ago - 7 comments
Labels: category: Bug, topic: Input Data

#2449 - How to obtain the BC column concentration

Issue - State: closed - Opened by yangbyy 29 days ago - 4 comments
Labels: category: Question, topic: Math and Units

#2448 - HEMCO ERROR: failed to open a restartfile named ./Restarts/GEOSChem.Restart.19810101_0000z.nc4

Issue - State: closed - Opened by InterstellarPenguin 30 days ago - 4 comments
Labels: category: Bug, topic: Configuration Files, topic: Runtime Error

#2447 - UVFlux diagnostics all zero when using Cloud-J photolysis

Issue - State: open - Opened by lizziel about 1 month ago - 1 comment
Labels: category: Bug, topic: Diagnostics

#2446 - Technical Inquiry: Issue Encountered While Running CMake Command

Issue - State: open - Opened by ChenBHXMU about 1 month ago - 3 comments
Labels: topic: Build, category: Debug Help

#2445 - Could the GEOS-Chem photolysis mechanism calculate Lyman-alpha photolysis at 121.57 nm?

Issue - State: open - Opened by Liyl2 about 1 month ago - 4 comments
Labels: category: Question, topic: Photolysis

#2444 - "Foribidden"/ Unavailable WashU Input File (FJX/v2024-05/ssa.dat)

Issue - State: closed - Opened by jhaskinsPhD about 1 month ago - 4 comments
Labels: category: Bug, topic: Input Data

#2443 - Exploring the use of GEOS-Chem with simpler LSODE solver through KPP for higher performance

Issue - State: open - Opened by jimmielin about 1 month ago
Labels: category: Question, topic: Chemical Mechanisms

#2442 - FINN daily files for recent years

Issue - State: closed - Opened by julietajuncosa about 1 month ago - 5 comments
Labels: category: Question, topic: Input Data, topic: Emissions

#2441 - Forced exit from Rosenbrock

Issue - State: closed - Opened by NatalliaMiatselskaya about 1 month ago - 4 comments
Labels: category: Bug

#2440 - Separating Wet Deposition Loss from Re-evaporation

Issue - State: open - Opened by AlfredMayhew about 1 month ago - 4 comments
Labels: category: Question, topic: TransportTracers Simulation, topic: Deposition

#2439 - Update run scripts and environment files for NASA discover cluster

Pull Request - State: closed - Opened by lizziel about 1 month ago - 3 comments
Labels: category: Feature Request, topic: User Environment, no-diff-to-benchmark

#2438 - cmake GCClassic with spack，compile failed

Issue - State: open - Opened by xiaomufeng 6 months ago - 1 comment
Labels: topic: Build, category: Debug Help

#2438 - cmake GCClassic with spack，compile failed

Issue - State: open - Opened by xiaomufeng 6 months ago - 1 comment
Labels: topic: Build, category: Debug Help

#2437 - libnetcdff.so.7: cannot open shared object file

Issue - State: open - Opened by xiaomufeng 4 months ago - 2 comments
Labels: category: Bug, topic: Build

#2437 - libnetcdff.so.7: cannot open shared object file

Issue - State: open - Opened by xiaomufeng 4 months ago - 2 comments
Labels: category: Bug, topic: Build

#2436 - Update GFED4_Climatology entries for period 2010-2023 with new species

Pull Request - State: closed - Opened by yantosca about 1 month ago - 3 comments
Labels: category: Feature Request, topic: Configuration Files, no-diff-to-benchmark, topic: Emissions

#2435 - Clarification on the Difference Between 'frequency' and 'duration' in HISTORY.rc

Issue - State: closed - Opened by ChenBHXMU about 1 month ago - 3 comments
Labels: category: Question, topic: Diagnostics

#2434 - How to apply day-of-month scaling factor?

Issue - State: open - Opened by hazel008 about 1 month ago - 1 comment
Labels: category: Feature Request

#2434 - How to apply day-of-month scaling factor?

Issue - State: open - Opened by hazel008 about 1 month ago - 1 comment
Labels: category: Feature Request

#2433 - Question about the contribution of aerosol phase methylglyoxal

Issue - State: closed - Opened by EnyuxPolyU about 1 month ago - 2 comments
Labels: help needed: Open Research Problem, category: Question, help needed: Request Input From Community, topic: Chemical Mechanisms

#2432 - Number concentration and mass concentration

Issue - State: closed - Opened by ChenBHXMU about 1 month ago - 2 comments
Labels: category: Question, Attn: Aerosols WG, topic: Aerosols

#2431 - How to set breakpoints to debug the program？

Issue - State: closed - Opened by ChenBHXMU about 1 month ago - 2 comments
Labels: category: Debug Help

#2430 - Updated soil NOx scheme from Yi Wang et al. (2021) as an option

Pull Request - State: closed - Opened by msulprizio about 1 month ago - 7 comments
Labels: category: Feature Request, no-diff-to-benchmark, topic: Emissions

#2430 - Updated soil NOx scheme from Yi Wang et al. (2021) as an option

Pull Request - State: closed - Opened by msulprizio about 1 month ago - 7 comments
Labels: category: Feature Request, no-diff-to-benchmark, topic: Emissions

#2429 - Differences between different versions of the "soilNOx.fert_res.generic.05x05.nc" file

Issue - State: closed - Opened by hlbutterfly about 1 month ago - 4 comments
Labels: category: Question, topic: Input Data, topic: Math and Units, topic: Emissions

#2428 - Bugfix/mass-conservation

Pull Request - State: open - Opened by nicholasbalasus about 1 month ago

#2428 - Fix mass non-conservation in VDIFF PBL mixing

Pull Request - State: closed - Opened by nicholasbalasus about 1 month ago - 2 comments
Labels: category: Bug Fix, topic: Convection and Mixing

#2427 - Missing GMI prod/loss files for GCAP2 40L grid

Issue - State: closed - Opened by yantosca about 2 months ago - 2 comments
Labels: category: Bug, topic: Input Data, topic: GCAP2 Meteorology

#2426 - Store aerosol-specific optics files in new Aerosol_Optics data directory

Pull Request - State: closed - Opened by lizziel about 2 months ago - 14 comments
Labels: category: Feature Request, topic: Structural Modifications, no-diff-to-benchmark

#2425 - Merge GEOS-Chem 14.4.3 into the 14.5.0 development branch

Pull Request - State: closed - Opened by yantosca about 2 months ago - 5 comments
Labels: category: Feature Request, no-diff-to-benchmark

#2424 - Support for Cloud-J version 8.0.0

Pull Request - State: closed - Opened by lizziel about 2 months ago - 2 comments
Labels: topic: Chemical Mechanisms, topic: Photolysis

#2423 - Sampling GeosChem CO2 simulation at OBSPACK sites

Issue - State: open - Opened by SumanClimate about 2 months ago - 6 comments
Labels: topic: Configuration Files, topic: Diagnostics, unsupported version, category: Debug Help

#2422 - How to get extinction coefficients from RRTMG in GEOS-Chem

Issue - State: open - Opened by neyest about 2 months ago - 1 comment
Labels: category: Question, topic: Aerosols

#2421 - Environment File: Unable to Detect "flex" module and more

Issue - State: closed - Opened by Kheryevan about 2 months ago - 4 comments
Labels: topic: User Environment, category: Debug Help

#2420 - Quick fix: Use TURBDAY instead of VDIFF in carbon gases simulations

Pull Request - State: closed - Opened by yantosca about 2 months ago - 2 comments
Labels: no-diff-to-benchmark, category: Bug Fix, topic: Carbon Gases Simulations

#2419 - Difficulty in reaction rate calculation

Issue - State: closed - Opened by ktravis213 about 2 months ago - 4 comments
Labels: topic: Chemical Mechanisms, topic: Math and Units, category: Debug Help

#2418 - Question about: Program received signal SIGSEGV: Segmentation fault - invalid memory reference.

Issue - State: open - Opened by chakarx about 2 months ago - 3 comments
Labels: topic: Runtime Error, category: Debug Help

#2418 - Question about: Program received signal SIGSEGV: Segmentation fault - invalid memory reference.

Issue - State: open - Opened by chakarx about 2 months ago - 2 comments
Labels: topic: Runtime Error, category: Debug Help

#2417 - In NcGet_Var_Attr_C: time, NetCDF: Variable not found

Issue - State: open - Opened by Naaimaben about 2 months ago - 1 comment
Labels: category: Bug, topic: Runtime Error

#2417 - In NcGet_Var_Attr_C: time, NetCDF: Variable not found

Issue - State: closed - Opened by Naaimaben about 2 months ago - 5 comments
Labels: category: Bug, topic: Runtime Error

#2416 - Cloud-J v7.7.2 in GEOS-Chem 14.4.2 results in a large slowdown

Issue - State: closed - Opened by yantosca about 2 months ago - 2 comments
Labels: category: Bug, topic: Photolysis

#2416 - Cloud-J v7.7.2 in GEOS-Chem 14.4.2 results in a large slowdown

Issue - State: open - Opened by yantosca about 2 months ago
Labels: category: Bug, topic: Photolysis

#2415 - Update GFED4 climatology file to include additional species

Issue - State: closed - Opened by msulprizio about 2 months ago - 1 comment
Labels: category: Feature Request, topic: Emissions

#2415 - Update GFED4 climatology file to include additional species

Issue - State: open - Opened by msulprizio about 2 months ago
Labels: category: Feature Request, topic: Emissions

#2414 - Issue about Configure with CMake and Configure with Make

Issue - State: closed - Opened by InterstellarPenguin about 2 months ago - 5 comments
Labels: topic: Build, category: Debug Help

#2414 - Issue about Configure with CMake and Configure with Make

Issue - State: closed - Opened by InterstellarPenguin about 2 months ago - 5 comments
Labels: topic: Build, category: Debug Help

#2413 - Fix incorrect unit conversion for H2O2 in the aerosol-only simulation

Pull Request - State: closed - Opened by yantosca about 2 months ago - 2 comments
Labels: no-diff-to-benchmark, category: Bug Fix, topic: Aerosol-Only Simulation

GitHub / geoschem/geos-chem issues and pull requests