georgeoshardo/SyMBac issues and pull requests

#49 - Intensity Variation for Individual Cells

Issue - State: open - Opened by kmpape about 1 month ago - 1 comment

#48 - Resizing Masks

Issue - State: open - Opened by kmpape about 1 month ago - 1 comment

#47 - Lineage creation error

Issue - State: open - Opened by cmalinmayor 2 months ago - 5 comments

#46 - Scipy convolve doesn't accept mode="constant"

Issue - State: closed - Opened by cmalinmayor 4 months ago - 2 comments

#45 - Output videos for tracking

Issue - State: closed - Opened by cmalinmayor 4 months ago - 10 comments

#44 - Apple Silicon port

Issue - State: open - Opened by henriquenunez 6 months ago - 1 comment

#43 - Fix all simulation issues

Pull Request - State: closed - Opened by georgeoshardo 8 months ago

#42 - Position Shift on Symbac 2

Issue - State: closed - Opened by kmpape 8 months ago - 5 comments

#41 - Cell lengths after division

Issue - State: closed - Opened by kmpape 8 months ago - 5 comments

#40 - include tag mode="constant"

Pull Request - State: closed - Opened by tauzn-clock 12 months ago

#39 - Error in convolution

Issue - State: closed - Opened by tauzn-clock about 1 year ago - 3 comments

#38 - minor update

Pull Request - State: closed - Opened by erezli about 1 year ago - 1 comment

#37 - Labelling

Issue - State: closed - Opened by kmpape about 1 year ago - 5 comments

#36 - Dataset from tutorial

Issue - State: closed - Opened by kmpape over 1 year ago - 1 comment

#35 - Missing property self.PSF.R in renderer.generate_test_comparison

Issue - State: closed - Opened by kmpape over 1 year ago - 5 comments

#34 - generate synthetic images at multiple objectives

Pull Request - State: open - Opened by bunirules over 1 year ago - 1 comment

#33 - tifffile version

Issue - State: closed - Opened by kmpape over 1 year ago - 1 comment

#32 - Unit Test Fails

Issue - State: closed - Opened by kmpape over 1 year ago - 3 comments

#31 - SyMBac.phase_contrast_drawing missing in main branch

Issue - State: closed - Opened by kmpape over 1 year ago - 1 comment

#30 - Update renderer.py

Pull Request - State: closed - Opened by CharlieW313 over 1 year ago

#29 - fix indexing error in pinching

Pull Request - State: closed - Opened by erezli almost 2 years ago

#28 - OO

Pull Request - State: closed - Opened by georgeoshardo almost 2 years ago - 1 comment

#27 - fix pinching

Pull Request - State: closed - Opened by erezli almost 2 years ago

#26 - add cell pinching

Pull Request - State: closed - Opened by erezli almost 2 years ago - 2 comments

#25 - Add CodeQL workflow for GitHub code scanning

Pull Request - State: closed - Opened by lgtm-com[bot] almost 2 years ago

#24 - Camera noise and 3 d sim

Pull Request - State: closed - Opened by georgeoshardo almost 2 years ago

#23 - fix burn_in for in_series output

Pull Request - State: closed - Opened by erezli about 2 years ago - 3 comments

#22 - lysis and option to produce in time series

Pull Request - State: closed - Opened by erezli about 2 years ago - 2 comments

#21 - Smaller Cell length and width Error of ValueError: too many values to unpack (expected 2)

Issue - State: open - Opened by DustinBaek over 2 years ago

#20 - V0.2.0

Pull Request - State: closed - Opened by georgeoshardo over 2 years ago

#19 - Bump tensorflow from 2.6.0 to 2.6.1

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 1 comment
Labels: dependencies

#18 - Replace pymunk simulator back-end with CellModeller

Issue - State: closed - Opened by georgeoshardo almost 3 years ago

#17 - Add colony simulations using CellModeller

Issue - State: closed - Opened by georgeoshardo almost 3 years ago

#16 - Package versions have conflicting dependencies

Issue - State: closed - Opened by crtorreg almost 3 years ago - 3 comments

#15 - GPU agnostic code

Issue - State: closed - Opened by georgeoshardo almost 3 years ago

#14 - Delete this/add file name arg

Issue - State: closed - Opened by georgeoshardo about 3 years ago

#13 - Create LICENSE

Pull Request - State: closed - Opened by georgeoshardo about 3 years ago

#12 - Fourier matching doesn't work for some images

Issue - State: open - Opened by georgeoshardo about 3 years ago - 1 comment