geometric-intelligence/dyn issues and pull requests

#50 - re: add interview to readme

Pull Request - State: closed - Opened by adele-myers almost 2 years ago

#49 - add interview

Pull Request - State: closed - Opened by adele-myers almost 2 years ago

#48 - edit readme

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#47 - edit readme

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#46 - edit readme

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#45 - edit readme

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#44 - edit readme

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#43 - update readme

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#42 - edit readme

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#41 - edit readme

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#40 - update readme

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#39 - Update README.md

Pull Request - State: closed - Opened by ninamiolane about 2 years ago

#38 - update README

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#37 - adding README

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#36 - Fix loading cells

Pull Request - State: closed - Opened by ninamiolane about 2 years ago

#35 - test optimize_am

Pull Request - State: closed - Opened by adele-myers about 2 years ago - 1 comment

#34 - Merge pull request #33 from bioshape-lab/new_amfit

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#33 - changing fit_data back to OG form

Pull Request - State: closed - Opened by adele-myers about 2 years ago - 1 comment

#32 - bug fix that was making mse_val = mse_train, giving tau_ij function m…

Pull Request - State: closed - Opened by adele-myers about 2 years ago - 1 comment

#31 - Fit a, degree with gradient descent and maybe random search

Pull Request - State: closed - Opened by adele-myers about 2 years ago - 1 comment

#30 - Add support to log experiments with wandb + Add unit-tests

Pull Request - State: closed - Opened by ninamiolane about 2 years ago - 1 comment

#29 - edit path in septin txt files

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#28 - organized .txt files

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#27 - clean optimize_am

Pull Request - State: closed - Opened by adele-myers about 2 years ago

#26 - New polyregr

Pull Request - State: closed - Opened by adele-myers about 2 years ago - 1 comment

#25 - adding last figures for septin analysis

Pull Request - State: closed - Opened by adele-myers over 2 years ago

#24 - elastic metric and polynomial regression optimization

Pull Request - State: closed - Opened by adele-myers over 2 years ago - 1 comment

#23 - Fix bugs in experimental.py and updates some notebooks

Pull Request - State: closed - Opened by ninamiolane over 2 years ago - 1 comment

#22 - Add jupyter lab with formatters to env.yml

Pull Request - State: closed - Opened by ninamiolane over 2 years ago

#22 - Add jupyter lab with formatters to env.yml

Pull Request - State: closed - Opened by ninamiolane over 2 years ago

#21 - Septin- final analysis and plots

Pull Request - State: closed - Opened by adele-myers over 2 years ago - 1 comment

#21 - Septin- final analysis and plots

Pull Request - State: closed - Opened by adele-myers over 2 years ago - 1 comment

#20 - Fix bugs in experimental datasets : osteosarcoma and retinal

Pull Request - State: closed - Opened by ninamiolane over 2 years ago - 1 comment

#19 - Add my zips into gitignore

Pull Request - State: closed - Opened by ninamiolane over 2 years ago

#18 - Small changes to Septin notebook

Pull Request - State: closed - Opened by adele-myers over 2 years ago - 2 comments

#17 - Allison

Pull Request - State: closed - Opened by adele-myers over 2 years ago - 1 comment

#16 - Geodesic fit with f transform

Pull Request - State: closed - Opened by adele-myers over 2 years ago - 1 comment

#15 - Elastictest

Pull Request - State: closed - Opened by adele-myers over 2 years ago

#14 - Add documentation details on the border cell cluster datasets

Pull Request - State: closed - Opened by ninamiolane over 2 years ago

#13 - Attempt geodesic fit with elastic metric & slight changes to synthetic.py

Pull Request - State: closed - Opened by adele-myers over 2 years ago - 1 comment

#12 - Adding cell trajectories of migrating cells

Pull Request - State: closed - Opened by ninamiolane over 2 years ago - 1 comment

#11 - Test kernel

Pull Request - State: closed - Opened by ninamiolane over 2 years ago - 1 comment

#10 - adding changes that we made in last meeting (two weeks ago)

Pull Request - State: closed - Opened by adele-myers over 2 years ago - 1 comment

#9 - Cells2dyn

Pull Request - State: closed - Opened by ninamiolane over 2 years ago - 1 comment

#8 - rename folder to dyn

Pull Request - State: closed - Opened by ninamiolane over 2 years ago

#7 - New experimental notebooks

Pull Request - State: closed - Opened by ninamiolane over 2 years ago - 1 comment

#6 - Add notebook exploring experimental datasets (not timeseries)

Pull Request - State: closed - Opened by ninamiolane over 2 years ago - 1 comment

#5 - load experimental data

Pull Request - State: closed - Opened by ninamiolane over 2 years ago

#4 - Add tests for notebooks

Pull Request - State: closed - Opened by ninamiolane over 2 years ago - 1 comment

#3 - Protusions

Pull Request - State: closed - Opened by ninamiolane over 2 years ago - 1 comment

#2 - Add geodesic regression

Pull Request - State: closed - Opened by ninamiolane over 2 years ago - 1 comment

#1 - First setup with synthetic datasets

Pull Request - State: closed - Opened by ninamiolane over 2 years ago - 1 comment

GitHub / geometric-intelligence/dyn issues and pull requests