Ecosyste.ms: Issues

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GitHub / genomehubs/goat-cli issues and pull requests

#27 - JSON error response from query that should work.

Issue - State: open - Opened by mahesh-panchal about 1 month ago

#26 - Support for other GenomeHubs sites

Issue - State: open - Opened by rjchallis 10 months ago - 1 comment

#25 - Optionally return JSON

Issue - State: open - Opened by Euphrasiologist 10 months ago

#23 - error for unfound taxa when supplying a file to goat taxon search

Issue - State: open - Opened by charlottewright about 1 year ago - 3 comments

#22 - --progress-bar not working

Issue - State: open - Opened by bm-silva about 1 year ago - 2 comments

#21 - ERROR downloading [...]

Issue - State: closed - Opened by bm-silva about 1 year ago - 6 comments

#20 - Support tax_name and tax_tree options

Issue - State: open - Opened by Euphrasiologist almost 2 years ago - 1 comment

#19 - Support excluding matching records

Issue - State: open - Opened by Euphrasiologist almost 2 years ago

#18 - URL encode colons in taxon identifiers

Issue - State: open - Opened by Euphrasiologist almost 2 years ago

#17 - Simplify machinery from flags and variable strings

Issue - State: open - Opened by Euphrasiologist almost 2 years ago

#15 - More report functionality?

Issue - State: open - Opened by Euphrasiologist about 2 years ago - 10 comments

#14 - Assembly

Pull Request - State: closed - Opened by Euphrasiologist about 2 years ago

#13 - make queryId unique across users

Issue - State: closed - Opened by rjchallis over 2 years ago

#12 - change record endpoint to report

Issue - State: closed - Opened by rjchallis over 2 years ago

#11 - add support for *Exclude

Issue - State: closed - Opened by rjchallis over 2 years ago - 6 comments

#10 - automate new release when available goat attributes change

Issue - State: open - Opened by rjchallis over 2 years ago

#9 - add support for tax_lineage search

Issue - State: closed - Opened by rjchallis over 2 years ago

#8 - update default url to api/v2

Issue - State: closed - Opened by rjchallis over 2 years ago

#7 - add additional summary types to vars/vars_to_string.py

Issue - State: open - Opened by rjchallis over 2 years ago - 2 comments

#6 - Add variable restriction to `goat lookup`

Issue - State: open - Opened by Euphrasiologist over 2 years ago

#5 - Add warning if taxon not found

Issue - State: open - Opened by Euphrasiologist over 2 years ago

#4 - Take a YAML file of input?

Issue - State: closed - Opened by Euphrasiologist over 2 years ago - 2 comments

#3 - Type check expressions

Issue - State: closed - Opened by Euphrasiologist over 2 years ago

#2 - Add suggestions to variable and expression typos

Issue - State: closed - Opened by Euphrasiologist over 2 years ago

#1 - Add lookup step

Issue - State: closed - Opened by Euphrasiologist almost 3 years ago