genenotebook/genenotebook issues and pull requests

#326 - Update dependency ws [SECURITY]

Pull Request - State: open - Opened by renovate[bot] 5 months ago

#325 - Update dependency @popperjs/core to v2.11.8

Pull Request - State: open - Opened by renovate[bot] 9 months ago

#324 - Update dependency @mapbox/node-pre-gyp to v1.0.11

Pull Request - State: open - Opened by renovate[bot] about 1 year ago

#323 - Update dependency xml2js to ^0.5.0 [SECURITY]

Pull Request - State: open - Opened by renovate[bot] over 1 year ago

#322 - Update dependency sinon to v14.0.2

Pull Request - State: open - Opened by renovate[bot] over 1 year ago - 1 comment

#321 - Update dependency fibers to v5.0.3

Pull Request - State: open - Opened by renovate[bot] over 1 year ago - 1 comment

#320 - Update dependency documentation to v14.0.3

Pull Request - State: open - Opened by renovate[bot] over 1 year ago

#319 - Update dependency react to v18.3.1

Pull Request - State: open - Opened by renovate[bot] over 1 year ago

#318 - Bump http-cache-semantics from 4.1.0 to 4.1.1

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#317 - Add tests, and fix several issues

Pull Request - State: closed - Opened by mboudet almost 2 years ago - 1 comment

#316 - Update dependency commander to v10 - autoclosed

Pull Request - State: closed - Opened by renovate[bot] almost 2 years ago

#315 - Async issues with readline and the jobqueue

Issue - State: open - Opened by mboudet almost 2 years ago

#314 - Bump json5 from 1.0.1 to 1.0.2

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#313 - Update dependency utf-8-validate to v6

Pull Request - State: open - Opened by renovate[bot] almost 2 years ago - 1 comment

#312 - Issues with updateUser method

Issue - State: open - Opened by mboudet almost 2 years ago - 2 comments
Labels: enhancement

#311 - Fix startup

Pull Request - State: open - Opened by Ld-monkey almost 2 years ago - 1 comment

#310 - Update dependency query-string to v8 - autoclosed

Pull Request - State: closed - Opened by renovate[bot] almost 2 years ago

#309 - master/dev branches status

Issue - State: open - Opened by abretaud almost 2 years ago - 1 comment

#308 - Fix installation / startup of genenotebook (regex email undefined)

Pull Request - State: closed - Opened by Ld-monkey almost 2 years ago

#307 - Update dependency d3 to v7.9.0

Pull Request - State: open - Opened by renovate[bot] almost 2 years ago

#306 - Update dependency query-string to v7.1.3

Pull Request - State: open - Opened by renovate[bot] almost 2 years ago

#305 - Update dependency sinon to v15 - autoclosed

Pull Request - State: closed - Opened by renovate[bot] about 2 years ago

#304 - Proteins management in GNB

Issue - State: open - Opened by mboudet about 2 years ago - 5 comments

#303 - Prepare for v0.3.2

Pull Request - State: closed - Opened by holmrenser about 2 years ago

#302 - Update dependency puppeteer to v19

Pull Request - State: closed - Opened by renovate[bot] about 2 years ago

#301 - Update dependency react-router-dom to 5.3

Pull Request - State: closed - Opened by renovate[bot] about 2 years ago

#300 - Update dependency react-bio-viz to v0.0.8

Pull Request - State: closed - Opened by renovate[bot] about 2 years ago

#299 - Update dependency parse-path to 5.0.0 [SECURITY]

Pull Request - State: closed - Opened by renovate[bot] about 2 years ago

#298 - Bump ansi-html and documentation

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#297 - Bump parse-path and documentation

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#296 - Bump glob-parent and documentation

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#295 - Update dependency minimatch to 3.0.5 [SECURITY]

Pull Request - State: closed - Opened by renovate[bot] about 2 years ago

#294 - Add links to genes in the phylogenic tree

Issue - State: open - Opened by mboudet about 2 years ago - 3 comments
Labels: enhancement

#293 - Fix the download problem

Pull Request - State: closed - Opened by Ld-monkey about 2 years ago
Labels: enhancement

#292 - Fix search issues

Pull Request - State: closed - Opened by mboudet about 2 years ago - 3 comments
Labels: bug

#291 - Search issues

Issue - State: closed - Opened by mboudet about 2 years ago - 2 comments
Labels: bug

#290 - Fix the rare case of a blast file

Pull Request - State: closed - Opened by Ld-monkey about 2 years ago - 1 comment

#289 - Genenotebook will not run with Node > 16.0

Issue - State: open - Opened by mboudet about 2 years ago - 1 comment
Labels: documentation

#288 - Make the uploaded file path configurable

Pull Request - State: closed - Opened by mboudet about 2 years ago

#287 - Update dependency simpl-schema to v3

Pull Request - State: closed - Opened by renovate[bot] about 2 years ago

#286 - Update dependency puppeteer to v18 - autoclosed

Pull Request - State: closed - Opened by renovate[bot] about 2 years ago

#285 - Update dependency file-type to v18

Pull Request - State: closed - Opened by renovate[bot] about 2 years ago

#284 - Update dependency documentation to v14 - autoclosed

Pull Request - State: closed - Opened by renovate[bot] about 2 years ago

#283 - Update dependency d3 to v7.6.1

Pull Request - State: closed - Opened by renovate[bot] about 2 years ago

#282 - Update dependency ansi-html to 0.0.8 [SECURITY] - autoclosed

Pull Request - State: closed - Opened by renovate[bot] about 2 years ago

#281 - Improvement of orthogroups

Pull Request - State: closed - Opened by Ld-monkey about 2 years ago - 3 comments
Labels: enhancement

#280 - Bump parse-url from 6.0.0 to 6.0.5

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies

#279 - Dev

Pull Request - State: closed - Opened by holmrenser about 2 years ago

#278 - version updates

Pull Request - State: closed - Opened by holmrenser about 2 years ago

#277 - New feature: read BLAST and Diamond output files and display their pairwise view

Pull Request - State: closed - Opened by Ld-monkey over 2 years ago - 1 comment
Labels: enhancement

#276 - Bump file-type from 17.1.1 to 17.1.3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#275 - Bump parse-url from 6.0.0 to 6.0.2

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#274 - Update dependency puppeteer to v15 - autoclosed

Pull Request - State: closed - Opened by renovate[bot] over 2 years ago

#273 - Update dependency puppeteer to v14 - autoclosed

Pull Request - State: closed - Opened by renovate[bot] over 2 years ago

#272 - Update dependency sinon to v14

Pull Request - State: closed - Opened by renovate[bot] over 2 years ago

#271 - Update dependency path-to-regexp to v6.2.1

Pull Request - State: closed - Opened by renovate[bot] over 2 years ago

#270 - Update dependency mocha to v10

Pull Request - State: closed - Opened by renovate[bot] over 2 years ago

#269 - Update github/codeql-action action to v2

Pull Request - State: closed - Opened by renovate[bot] over 2 years ago

#268 - updates

Pull Request - State: closed - Opened by holmrenser over 2 years ago

#267 - New feature: add eggNOG annotations

Pull Request - State: closed - Opened by Ld-monkey over 2 years ago - 5 comments

#266 - Bump ansi-regex from 5.0.0 to 5.0.1 in /packages/meteor-job-collection/meteor-job

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#265 - Add eggnogmapper annotations (filereader, db schema)

Issue - State: closed - Opened by holmrenser over 2 years ago - 1 comment
Labels: enhancement

#264 - Update dependency glob to v8

Pull Request - State: closed - Opened by renovate[bot] over 2 years ago

#263 - Bump minimist from 1.2.5 to 1.2.6

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#262 - Update dependency react-dom to v18

Pull Request - State: closed - Opened by renovate[bot] over 2 years ago - 1 comment

#261 - Update dependency react to v18

Pull Request - State: closed - Opened by renovate[bot] over 2 years ago - 1 comment

#260 - Update dependency d3 to v7.4.4

Pull Request - State: closed - Opened by renovate[bot] over 2 years ago

#259 - Update actions/checkout action to v3

Pull Request - State: closed - Opened by renovate[bot] over 2 years ago

#258 - Update dependency node-gyp to v9

Pull Request - State: closed - Opened by renovate[bot] over 2 years ago

#257 - Update dependency object-hash to v3

Pull Request - State: closed - Opened by renovate[bot] almost 3 years ago

#256 - Make the uploaded file path configurable

Issue - State: closed - Opened by abretaud almost 3 years ago - 3 comments
Labels: enhancement

#255 - Update dependency url-parse to v1.5.10

Pull Request - State: closed - Opened by renovate[bot] almost 3 years ago

#254 - New tsv parser for interproscan files

Pull Request - State: closed - Opened by Ld-monkey almost 3 years ago - 1 comment
Labels: enhancement

#253 - Bump pathval from 1.1.0 to 1.1.1 in /packages/meteor-job-collection/meteor-job

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#252 - Update dependency pathval to 1.1.1 [SECURITY]

Pull Request - State: closed - Opened by renovate[bot] almost 3 years ago

#251 - Fix chmod syntax

Pull Request - State: closed - Opened by abretaud almost 3 years ago - 1 comment

#250 - Update dependency query-string to v7.1.1

Pull Request - State: closed - Opened by renovate[bot] almost 3 years ago

#249 - Update dependency commander to v9

Pull Request - State: closed - Opened by renovate[bot] almost 3 years ago

#248 - Update dependency sinon to v13

Pull Request - State: closed - Opened by renovate[bot] almost 3 years ago

#247 - Update dependency rewire to v6

Pull Request - State: closed - Opened by renovate[bot] almost 3 years ago

#246 - Update dependency react-resize-detector to v7

Pull Request - State: closed - Opened by renovate[bot] almost 3 years ago

#245 - Update dependency file-type to v17

Pull Request - State: closed - Opened by renovate[bot] almost 3 years ago

#244 - Update dependency query-string to v7.1.0

Pull Request - State: closed - Opened by renovate[bot] almost 3 years ago

#243 - Update dependency url-parse to v1.5.4

Pull Request - State: closed - Opened by renovate[bot] almost 3 years ago

#242 - Update dependency nanoid to 3.1.31 [SECURITY]

Pull Request - State: closed - Opened by renovate[bot] almost 3 years ago

#241 - Bump cached-path-relative from 1.0.2 to 1.1.0

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#238 - Bump nanoid from 3.1.23 to 3.2.0

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#236 - Update dependency eslint-config-airbnb to v19

Pull Request - State: closed - Opened by renovate[bot] about 3 years ago

#235 - Update dependency react-router-dom to v6

Pull Request - State: closed - Opened by renovate[bot] about 3 years ago

#234 - Update dependency sinon to v12 - autoclosed

Pull Request - State: closed - Opened by renovate[bot] about 3 years ago

#233 - Update dependency puppeteer to v11 - autoclosed

Pull Request - State: closed - Opened by renovate[bot] about 3 years ago

#232 - Update circleci/node Docker tag to v17

Pull Request - State: closed - Opened by renovate[bot] about 3 years ago

#231 - Update dependency eslint to v8

Pull Request - State: closed - Opened by renovate[bot] about 3 years ago

#230 - Update dependency d3 to v7.3.0

Pull Request - State: closed - Opened by renovate[bot] about 3 years ago

#229 - Update dependency react-select to v5

Pull Request - State: closed - Opened by renovate[bot] about 3 years ago

#217 - Update dependency flow-bin to ^0.165.0 - autoclosed

Pull Request - State: closed - Opened by renovate[bot] about 3 years ago

#216 - Update circleci/node Docker tag to v16.13.1

Pull Request - State: closed - Opened by renovate[bot] about 3 years ago

#212 - Update dependency node-fetch to v3

Pull Request - State: closed - Opened by renovate[bot] about 3 years ago

#103 - GeneNotebook doesn't update with the added genome/annotation files

Issue - State: closed - Opened by biplabendu over 4 years ago - 2 comments
Labels: documentation

#102 - Terminal commands not working for docker installation

Issue - State: closed - Opened by biplabendu over 4 years ago - 1 comment
Labels: has-workaround, documentation

GitHub / genenotebook/genenotebook issues and pull requests