Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / gemdat-repos/gemdat issues and pull requests

#184 - Fix number of colors for plot_points

Pull Request - State: closed - Opened by AstyLavrinenko 10 months ago - 2 comments

#183 - Issue with density plot colors for sites

Issue - State: closed - Opened by AstyLavrinenko 10 months ago

#183 - Issue with density plot colors for sites

Issue - State: closed - Opened by AstyLavrinenko 10 months ago

#182 - Metrics with standard deviation

Pull Request - State: closed - Opened by v1kko 10 months ago

#182 - Metrics with standard deviation

Pull Request - State: closed - Opened by v1kko 10 months ago

#181 - Error bars for numbers in gemdash

Issue - State: closed - Opened by v1kko 10 months ago

#181 - Error bars for numbers in gemdash

Issue - State: closed - Opened by v1kko 10 months ago

#180 - Update gemdash tests

Pull Request - State: closed - Opened by v1kko 10 months ago

#180 - Update gemdash tests

Pull Request - State: closed - Opened by v1kko 10 months ago

#179 - Consider dropping yapf for ruff formatter

Issue - State: closed - Opened by stefsmeets 11 months ago - 1 comment

#179 - Consider dropping yapf for ruff formatter

Issue - State: closed - Opened by stefsmeets 11 months ago - 7 comments

#178 - Implement energy landscapes and pathways from simulation

Pull Request - State: closed - Opened by SCiarella 11 months ago - 4 comments

#178 - Implement energy landscapes and pathways from simulation

Pull Request - State: closed - Opened by SCiarella 11 months ago - 4 comments

#177 - Improving plots

Pull Request - State: closed - Opened by v1kko 11 months ago - 1 comment

#177 - Improving plots

Pull Request - State: closed - Opened by v1kko 11 months ago - 1 comment

#176 - Make sure the aspect ratio of the density plot is similar to the volume

Pull Request - State: closed - Opened by v1kko 11 months ago - 1 comment

#175 - Tweak density plotting function

Pull Request - State: closed - Opened by AstyLavrinenko 11 months ago

#175 - Tweak density plotting function

Pull Request - State: closed - Opened by AstyLavrinenko 11 months ago

#174 - Add density plot to dashboard

Pull Request - State: closed - Opened by stefsmeets 11 months ago

#174 - Add density plot to dashboard

Pull Request - State: closed - Opened by stefsmeets 11 months ago

#173 - Dashboard tests are broken

Issue - State: closed - Opened by stefsmeets 11 months ago

#173 - Dashboard tests are broken

Issue - State: closed - Opened by stefsmeets 11 months ago

#172 - Fix hash function

Pull Request - State: closed - Opened by stefsmeets 11 months ago

#172 - Fix hash function

Pull Request - State: closed - Opened by stefsmeets 11 months ago

#171 - Add support for loading NPT data with varying lattice

Pull Request - State: closed - Opened by stefsmeets 11 months ago

#171 - Add support for loading NPT data with varying lattice

Pull Request - State: closed - Opened by stefsmeets 11 months ago

#170 - Hash function does not provide stable output

Issue - State: closed - Opened by stefsmeets 11 months ago

#170 - Hash function does not provide stable output

Issue - State: closed - Opened by stefsmeets 11 months ago

#169 - Fix known material MnO2

Pull Request - State: closed - Opened by stefsmeets 11 months ago

#169 - Fix known material MnO2

Pull Request - State: closed - Opened by stefsmeets 11 months ago

#168 - Fix typos in contributing.md

Pull Request - State: closed - Opened by SCiarella 11 months ago - 1 comment

#168 - Fix typos in contributing.md

Pull Request - State: closed - Opened by SCiarella 11 months ago - 1 comment

#167 - Basic functions of rotation implementation

Issue - State: closed - Opened by alexandrosvasi 11 months ago - 5 comments

#167 - Basic functions of rotation implementation

Issue - State: open - Opened by alexandrosvasi 11 months ago - 5 comments

#166 - Site shape analysis

Pull Request - State: closed - Opened by AstyLavrinenko 11 months ago - 13 comments

#166 - Site shape analysis

Pull Request - State: closed - Opened by AstyLavrinenko 11 months ago - 13 comments

#165 - known_material 'mno2_lambda'

Issue - State: closed - Opened by AstyLavrinenko 11 months ago - 1 comment

#165 - known_material 'mno2_lambda'

Issue - State: closed - Opened by AstyLavrinenko 11 months ago - 1 comment

#164 - run MD-of perfect cube for reference

Issue - State: closed - Opened by alexandrosvasi 11 months ago

#164 - run MD-of perfect cube for reference

Issue - State: closed - Opened by alexandrosvasi 11 months ago

#163 - Overview of the 10/10/2023 meeting

Issue - State: closed - Opened by alexandrosvasi 11 months ago - 1 comment

#163 - Overview of the 10/10/2023 meeting

Issue - State: closed - Opened by alexandrosvasi 11 months ago - 1 comment

#162 - Allow uneven splits with np.array_split

Pull Request - State: closed - Opened by v1kko 11 months ago

#162 - Allow uneven splits with np.array_split

Pull Request - State: closed - Opened by v1kko 11 months ago

#161 - Added descriptive error on loading incomplete xml file, append kwargs to cache path

Pull Request - State: closed - Opened by v1kko 11 months ago - 2 comments

#161 - Added descriptive error on loading incomplete xml file, append kwargs to cache path

Pull Request - State: closed - Opened by v1kko 11 months ago - 2 comments

#160 - Update volume.py

Pull Request - State: closed - Opened by AstyLavrinenko 11 months ago - 6 comments

#160 - Update volume.py

Pull Request - State: closed - Opened by AstyLavrinenko 11 months ago - 6 comments

#159 - data division only works if len(trajectory)%n_parts==0

Issue - State: closed - Opened by v9lgraf 11 months ago - 2 comments

#158 - The trajectory objects only have every 10th ionic step in their frame

Issue - State: closed - Opened by v9lgraf 11 months ago - 2 comments

#158 - The trajectory objects only have every 10th ionic step in their frame

Issue - State: closed - Opened by v9lgraf 11 months ago - 2 comments

#157 - Trajectory.from_vasprun Constructor

Issue - State: closed - Opened by v9lgraf 11 months ago

#157 - Trajectory.from_vasprun Constructor

Issue - State: closed - Opened by v9lgraf 11 months ago

#155 - Enable testing of dashboard inside github action

Pull Request - State: closed - Opened by v1kko 11 months ago

#155 - Enable testing of dashboard inside github action

Pull Request - State: closed - Opened by v1kko 11 months ago

#154 - Playwright tests for the dashboard

Pull Request - State: closed - Opened by v1kko 11 months ago

#154 - Playwright tests for the dashboard

Pull Request - State: closed - Opened by v1kko 11 months ago

#150 - Priority order for new features (please edit)

Issue - State: closed - Opened by v1kko 12 months ago

#150 - Priority order for new features (please edit)

Issue - State: closed - Opened by v1kko 12 months ago

#147 - develop an example jupyter script

Issue - State: closed - Opened by alexandrosvasi 12 months ago - 3 comments
Labels: documentation

#147 - develop an example jupyter script

Issue - State: open - Opened by alexandrosvasi 12 months ago - 2 comments
Labels: documentation

#146 - Specific outputs for users (Add to list if you think of one)

Issue - State: closed - Opened by v1kko 12 months ago - 1 comment
Labels: later

#145 - Documentation Improvements (please add if you think of something)

Issue - State: closed - Opened by v1kko 12 months ago - 1 comment
Labels: documentation

#145 - Documentation Improvements (please add if you think of something)

Issue - State: open - Opened by v1kko 12 months ago
Labels: documentation

#144 - Implement energy landscapes and pathways from simulation

Issue - State: closed - Opened by stefsmeets 12 months ago - 5 comments

#144 - Implement energy landscapes and pathways from simulation

Issue - State: closed - Opened by stefsmeets 12 months ago - 5 comments

#135 - Symmetrize sites from density sites

Issue - State: closed - Opened by stefsmeets about 1 year ago - 1 comment

#129 - Add tests for dashboard

Issue - State: closed - Opened by stefsmeets about 1 year ago

#129 - Add tests for dashboard

Issue - State: closed - Opened by stefsmeets about 1 year ago

#128 - `volume_to_structure` enhancements

Issue - State: closed - Opened by stefsmeets about 1 year ago - 3 comments

#128 - `volume_to_structure` enhancements

Issue - State: open - Opened by stefsmeets about 1 year ago - 2 comments

#124 - Add density plot to dashboard

Issue - State: closed - Opened by stefsmeets about 1 year ago - 4 comments

#124 - Add density plot to dashboard

Issue - State: closed - Opened by stefsmeets about 1 year ago - 4 comments

#92 - Calculate transition energy between sites

Issue - State: closed - Opened by v1kko about 1 year ago - 2 comments
Labels: later

#92 - Calculate transition energy between sites

Issue - State: closed - Opened by v1kko about 1 year ago - 2 comments
Labels: later

#91 - Implement conditionals for a jump.

Issue - State: closed - Opened by v1kko about 1 year ago - 4 comments

#91 - Implement conditionals for a jump.

Issue - State: closed - Opened by v1kko about 1 year ago - 4 comments

#88 - Implement error bars for plots using parts when available

Issue - State: closed - Opened by v1kko about 1 year ago - 1 comment

#47 - Add support for data from other formats

Issue - State: open - Opened by stefsmeets about 1 year ago - 4 comments
Labels: waiting on example data

#47 - Add support for data from other formats

Issue - State: open - Opened by stefsmeets about 1 year ago - 4 comments
Labels: waiting on example data

#46 - Implement sites that are dynamic over time

Issue - State: closed - Opened by stefsmeets about 1 year ago - 2 comments

#32 - Consider using xarray as a data store

Issue - State: closed - Opened by stefsmeets about 1 year ago - 3 comments

#32 - Consider using xarray as a data store

Issue - State: open - Opened by stefsmeets about 1 year ago - 2 comments

#23 - Interactive plotting library (especially for 3d plots in notebooks)

Issue - State: closed - Opened by v1kko about 1 year ago - 5 comments

#23 - Interactive plotting library (especially for 3d plots in notebooks)

Issue - State: closed - Opened by v1kko about 1 year ago - 5 comments