Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / gagneurlab/absplice issues and pull requests

#38 - SpliceAI running time

Issue - State: open - Opened by LucaBertoli 8 months ago - 5 comments

#37 - add link to hg19 precomputed scores README.md

Pull Request - State: closed - Opened by neverov-am 9 months ago

#36 - Can't find cause of the error

Issue - State: closed - Opened by glitchheadgit 10 months ago - 2 comments

#35 - License

Issue - State: open - Opened by logust79 12 months ago - 1 comment

#34 - AbSplice score sorting

Pull Request - State: closed - Opened by neverov-am about 1 year ago

#33 - AbSplice score sorting

Pull Request - State: closed - Opened by neverov-am about 1 year ago

#32 - AbSplice score sorting

Pull Request - State: closed - Opened by neverov-am about 1 year ago

#31 - Sorting by median_n in utils.py get_abs_max_rows

Pull Request - State: closed - Opened by neverov-am about 1 year ago

#30 - Dev

Pull Request - State: closed - Opened by neverov-am about 1 year ago

#29 - fix snakemake version

Pull Request - State: closed - Opened by neverov-am over 1 year ago

#28 - fix AbSplice-DNA snakefile

Pull Request - State: closed - Opened by neverov-am over 1 year ago

#27 - Splicemap_tissues

Issue - State: closed - Opened by knakamura6222053 over 1 year ago - 3 comments

#26 - How to get CATs data

Issue - State: open - Opened by Eyulaochen over 1 year ago - 7 comments

#25 - Container Environment problem

Issue - State: closed - Opened by ShaynaMallett over 1 year ago - 2 comments

#24 - How to add specific tissues like the retina into the source code

Issue - State: closed - Opened by Eyulaochen over 1 year ago - 7 comments
Labels: good first issue

#23 - Dev

Pull Request - State: closed - Opened by neverov-am over 1 year ago

#22 - AbSplice-RNA download is not default

Pull Request - State: closed - Opened by neverov-am over 1 year ago

#21 - can't install, stop at "Solving environment: |"

Issue - State: closed - Opened by Eyulaochen over 1 year ago - 2 comments

#20 - Circleci project setup

Pull Request - State: closed - Opened by WagnerNils over 1 year ago

#19 - Circleci project setup

Pull Request - State: closed - Opened by WagnerNils over 1 year ago - 1 comment

#18 - Circleci project setup

Pull Request - State: closed - Opened by WagnerNils over 1 year ago

#17 - implement usage of databases split by chromosome

Pull Request - State: closed - Opened by neverov-am over 1 year ago

#16 - T2T CHM13v2.0 (hs1) support

Issue - State: closed - Opened by misshie over 1 year ago - 1 comment

#15 - Absplice-RNA

Issue - State: closed - Opened by yanwang271 over 1 year ago - 3 comments

#14 - add MANIFEST.in

Pull Request - State: closed - Opened by Hoeze over 1 year ago

#13 - initial ONNX support

Pull Request - State: open - Opened by Hoeze over 1 year ago - 1 comment

#12 - Bugs in Absplice implementation

Issue - State: closed - Opened by knakamura6222053 over 1 year ago - 18 comments

#11 - Dev

Pull Request - State: closed - Opened by WagnerNils over 1 year ago

#10 - Dev

Pull Request - State: closed - Opened by WagnerNils over 1 year ago

#9 - Add SpliceMap info to AbSplice output

Issue - State: closed - Opened by WagnerNils over 1 year ago
Labels: enhancement

#8 - include outliers in absplice_rna

Pull Request - State: closed - Opened by WagnerNils almost 2 years ago

#7 - include outliers in absplice_rna

Pull Request - State: closed - Opened by WagnerNils almost 2 years ago

#6 - Can't get attribute 'EBMPreprocessor' on <module 'interpret.glassbox.ebm.ebm'

Issue - State: closed - Opened by KuechlerO almost 2 years ago - 2 comments

#5 - drop duplicates

Pull Request - State: closed - Opened by WagnerNils about 2 years ago

#4 - make mmsplice + splicemap faster

Pull Request - State: closed - Opened by WagnerNils about 2 years ago
Labels: enhancement

#3 - handle multiple predictions from SpliceAI for a single variant

Pull Request - State: closed - Opened by bfclarke over 2 years ago - 2 comments

#2 - Convert EBM model to ONNX to get rid of interpret dependency

Issue - State: open - Opened by Hoeze over 2 years ago - 3 comments

#1 - Add AbSplice to environment.yaml

Issue - State: closed - Opened by Hoeze over 2 years ago