Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / ga4gh/tool-registry-service-schemas issues and pull requests

#246 - Correct security scheme to native openapi bearer scheme

Issue - State: open - Opened by denis-yuen over 1 year ago
Labels: Type: Enhancement, Type: Schema

#245 - Bump debug from 3.2.6 to 3.2.7

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#244 - Tool description sourced from tool version can involve guesswork

Issue - State: open - Opened by denis-yuen over 1 year ago - 2 comments

#243 - Issue with imported files "below" or "cousins" of the primary descriptor

Issue - State: open - Opened by denis-yuen over 1 year ago - 3 comments
Labels: Project: TRS

#242 - Bump semver from 5.7.1 to 5.7.2

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#241 - TRS write API

Issue - State: open - Opened by denis-yuen almost 2 years ago - 1 comment
Labels: enhancement

#240 - TRS should indicate engines and versions a tool can run on

Issue - State: open - Opened by coverbeck almost 2 years ago
Labels: enhancement

#239 - Small comment round up

Pull Request - State: closed - Opened by denis-yuen almost 2 years ago - 1 comment

#238 - Feature/procedural cleanup

Pull Request - State: closed - Opened by denis-yuen about 2 years ago - 2 comments

#237 - Bump http-cache-semantics from 4.1.0 to 4.1.1

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#236 - Bump cookiejar from 2.1.2 to 2.1.4

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#235 - TRS should be able to serve binary files

Issue - State: open - Opened by coverbeck about 2 years ago - 5 comments
Labels: enhancement

#234 - Bump minimatch from 3.0.4 to 3.1.2

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#233 - Bump json5 from 1.0.1 to 1.0.2

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#232 - Bump json-pointer from 0.6.1 to 0.6.2

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#231 - Change version example to have 2 unique versions

Pull Request - State: closed - Opened by coverbeck about 2 years ago

#230 - Bump qs from 6.9.4 to 6.11.0

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#228 - No description property in tool version

Issue - State: closed - Opened by patmagee about 2 years ago

#227 - Bump loader-utils from 1.4.0 to 1.4.2

Pull Request - State: open - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#226 - Feature/fix build process

Pull Request - State: closed - Opened by denis-yuen over 2 years ago

#225 - Indicate that a workflow is fully "containerized"

Issue - State: open - Opened by uniqueg over 2 years ago
Labels: enhancement, Project: TRS

#224 - No way of knowing a tool is valid without actually parsing or running it

Issue - State: open - Opened by patmagee over 2 years ago - 4 comments
Labels: enhancement, Project: TRS, Type: Question

#223 - TRS write api for usage

Issue - State: open - Opened by denis-yuen over 2 years ago - 1 comment
Labels: question, Project: TRS

#222 - percent encoding issue with IDs

Issue - State: open - Opened by denis-yuen over 2 years ago
Labels: help wanted, question, security

#221 - URI interaction problem with API versioning

Issue - State: open - Opened by denis-yuen over 2 years ago - 1 comment
Labels: Project: TRS

#220 - base path problem with TRS URIs

Issue - State: open - Opened by denis-yuen over 2 years ago - 3 comments
Labels: Due: Sep

#219 - Added descriptor_type_version to ToolVersion definition

Pull Request - State: closed - Opened by patmagee almost 3 years ago - 6 comments
Labels: Due: Sep

#218 - Bump ansi-regex from 3.0.0 to 3.0.1

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#217 - Bump node-fetch from 2.6.1 to 2.6.7

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#216 - Bump async from 2.6.3 to 2.6.4

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#215 - Procedure for adding new workflow languages

Issue - State: open - Opened by denis-yuen almost 3 years ago - 1 comment
Labels: enhancement, Project: TRS

#214 - Bump minimist from 1.2.5 to 1.2.6

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#213 - Bump prismjs from 1.25.0 to 1.27.0

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies

#212 - test validation

Pull Request - State: closed - Opened by denis-yuen about 3 years ago

#211 - re-usable openapi 3 validation/linting

Issue - State: closed - Opened by denis-yuen about 3 years ago

#209 - Fix up github action token passing

Pull Request - State: closed - Opened by denis-yuen about 3 years ago - 1 comment

#208 - fix: add missing SMK to enum of supported types

Pull Request - State: closed - Opened by uniqueg about 3 years ago - 3 comments

#207 - Bump @redocly/openapi-cli from 1.0.0-beta.4 to 1.0.0-beta.59

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 4 comments
Labels: dependencies

#206 - Bump prismjs from 1.24.1 to 1.25.0

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#205 - tag-based search

Issue - State: open - Opened by denis-yuen over 3 years ago
Labels: Type: Enhancement

#204 - Point to Dockstore TRS v2 service-info endpoint

Pull Request - State: closed - Opened by coverbeck over 3 years ago - 2 comments

#203 - provide additional type info if available to filewrapper

Pull Request - State: closed - Opened by denis-yuen over 3 years ago - 1 comment

#202 - Describe versioned TRS URIs

Pull Request - State: closed - Opened by uniqueg over 3 years ago - 10 comments

#201 - Migrate gh actions

Pull Request - State: closed - Opened by denis-yuen over 3 years ago

#200 - Uniqueg add snakemake

Pull Request - State: closed - Opened by denis-yuen over 3 years ago - 1 comment

#199 - Fix table of contents generation

Pull Request - State: closed - Opened by garyluu over 3 years ago

#198 - npm audit fix

Pull Request - State: closed - Opened by garyluu over 3 years ago - 2 comments

#197 - Bump path-parse from 1.0.6 to 1.0.7

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 3 comments
Labels: dependencies

#196 - [Security] Bump ws from 7.3.1 to 7.5.3

Pull Request - State: closed - Opened by dependabot-preview[bot] over 3 years ago - 2 comments
Labels: dependencies, security

#195 - [Security] Bump dompurify from 2.0.12 to 2.3.0

Pull Request - State: closed - Opened by dependabot-preview[bot] over 3 years ago - 1 comment
Labels: dependencies, security

#194 - [Security] Bump prismjs from 1.23.0 to 1.24.1

Pull Request - State: closed - Opened by dependabot-preview[bot] over 3 years ago - 2 comments
Labels: dependencies, security

#193 - [Security] Bump ws from 7.3.1 to 7.5.2

Pull Request - State: closed - Opened by dependabot-preview[bot] over 3 years ago - 1 comment
Labels: dependencies, security

#192 - [Security] Bump ws from 7.3.1 to 7.5.1

Pull Request - State: closed - Opened by dependabot-preview[bot] over 3 years ago - 1 comment
Labels: dependencies, security

#191 - [Security] Bump prismjs from 1.23.0 to 1.24.0

Pull Request - State: closed - Opened by dependabot-preview[bot] over 3 years ago - 1 comment
Labels: dependencies, security

#190 - [Security] Bump ws from 7.3.1 to 7.5.0

Pull Request - State: closed - Opened by dependabot-preview[bot] over 3 years ago - 1 comment
Labels: dependencies, security

#189 - [Security] Bump normalize-url from 4.5.0 to 4.5.1

Pull Request - State: closed - Opened by dependabot-preview[bot] over 3 years ago - 2 comments
Labels: dependencies, security

#188 - [Security] Bump glob-parent from 5.1.1 to 5.1.2

Pull Request - State: closed - Opened by dependabot-preview[bot] over 3 years ago - 2 comments
Labels: dependencies, security

#187 - [Security] Bump merge-deep from 3.0.2 to 3.0.3

Pull Request - State: closed - Opened by dependabot-preview[bot] over 3 years ago - 2 comments
Labels: dependencies, security

#186 - Stable 2.0.1 release documentation

Issue - State: closed - Opened by fbacall over 3 years ago - 2 comments

#185 - [Security] Bump dompurify from 2.0.12 to 2.2.9

Pull Request - State: closed - Opened by dependabot-preview[bot] over 3 years ago - 1 comment
Labels: dependencies, security

#184 - Bump ws from 7.3.1 to 7.4.6

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago - 1 comment
Labels: dependencies

#183 - Update README.md

Pull Request - State: closed - Opened by garyluu almost 4 years ago - 1 comment

#182 - [Security] Bump json-pointer from 0.6.0 to 0.6.1

Pull Request - State: closed - Opened by dependabot-preview[bot] almost 4 years ago - 3 comments
Labels: dependencies, security

#181 - [Security] Bump lodash from 4.17.19 to 4.17.21

Pull Request - State: closed - Opened by dependabot-preview[bot] almost 4 years ago - 3 comments
Labels: dependencies, security

#180 - [Security] Bump handlebars from 4.7.6 to 4.7.7

Pull Request - State: closed - Opened by dependabot-preview[bot] almost 4 years ago - 3 comments
Labels: dependencies, security

#179 - [Security] Bump dompurify from 2.0.12 to 2.2.8

Pull Request - State: closed - Opened by dependabot-preview[bot] almost 4 years ago - 1 comment
Labels: dependencies, security

#178 - [Security] Bump y18n from 4.0.0 to 4.0.3

Pull Request - State: closed - Opened by dependabot-preview[bot] almost 4 years ago - 2 comments
Labels: dependencies, security

#177 - [Security] Bump y18n from 4.0.0 to 4.0.2

Pull Request - State: closed - Opened by dependabot-preview[bot] almost 4 years ago - 1 comment
Labels: dependencies, security

#176 - [Security] Bump y18n from 4.0.0 to 4.0.1

Pull Request - State: closed - Opened by dependabot-preview[bot] almost 4 years ago - 1 comment
Labels: dependencies, security

#175 - [Security] Bump dompurify from 2.0.12 to 2.2.7

Pull Request - State: closed - Opened by dependabot-preview[bot] almost 4 years ago - 1 comment
Labels: dependencies, security

#174 - [Security] Bump elliptic from 6.5.3 to 6.5.4

Pull Request - State: closed - Opened by dependabot-preview[bot] almost 4 years ago - 3 comments
Labels: dependencies, security

#173 - [Security] Bump prismjs from 1.22.0 to 1.23.0

Pull Request - State: closed - Opened by dependabot-preview[bot] almost 4 years ago - 1 comment
Labels: dependencies, security

#172 - Add checksum to ToolFile

Pull Request - State: closed - Opened by garyluu about 4 years ago - 1 comment

#171 - Transition GA4GH repos to GH actions

Issue - State: closed - Opened by unito-bot about 4 years ago - 2 comments
Labels: Project: TRS

#170 - [Security] Bump dompurify from 2.0.12 to 2.2.6

Pull Request - State: closed - Opened by dependabot-preview[bot] about 4 years ago - 1 comment
Labels: dependencies, security

#169 - Bump ini from 1.3.5 to 1.3.8

Pull Request - State: closed - Opened by dependabot[bot] about 4 years ago - 3 comments
Labels: dependencies

#168 - [Security] Bump ini from 1.3.5 to 1.3.7

Pull Request - State: closed - Opened by dependabot-preview[bot] about 4 years ago - 2 comments
Labels: dependencies, security

#167 - Feature/142/remove swagger use open api

Pull Request - State: closed - Opened by garyluu about 4 years ago

#164 - Add versioned TRS URI to documentation

Issue - State: open - Opened by uniqueg over 4 years ago - 11 comments

#163 - Snakemake support

Pull Request - State: closed - Opened by uniqueg over 4 years ago - 2 comments

#161 - [Security] Bump dot-prop from 4.2.0 to 4.2.1

Pull Request - State: closed - Opened by dependabot-preview[bot] over 4 years ago - 2 comments
Labels: dependencies, security

#160 - Add JSON hyperlinks for navigating API resources

Issue - State: open - Opened by stain over 4 years ago - 2 comments
Labels: Status: Help Wanted

#157 - Should be able to fetch all of a Tool's checksums with one API call

Issue - State: closed - Opened by Richard-Hansen over 4 years ago
Labels: Type: Enhancement

#156 - Include Snakemake in descriptor type enumerator

Issue - State: closed - Opened by uniqueg over 4 years ago - 7 comments
Labels: enhancement

#155 - "GET .../containerfile" endpoint should return "ImageType" as well

Issue - State: closed - Opened by uniqueg over 4 years ago - 2 comments

#151 - [Security] Bump node-fetch from 2.6.0 to 2.6.1

Pull Request - State: closed - Opened by dependabot-preview[bot] over 4 years ago - 3 comments
Labels: dependencies, security

#149 - Github.io page does not have recent TRS developments

Issue - State: closed - Opened by coverbeck over 4 years ago

#142 - Designate openapi 3 version as source of truth for 2.0.1

Issue - State: closed - Opened by denis-yuen over 4 years ago - 2 comments
Labels: enhancement

#117 - Investigate content-type header

Issue - State: closed - Opened by denis-yuen about 5 years ago - 3 comments
Labels: question

#116 - Should be able to fetch bundles with TRS API

Issue - State: closed - Opened by coverbeck over 5 years ago - 4 comments
Labels: Type: Enhancement

#114 - documentation feedback from committee meeting

Issue - State: open - Opened by denis-yuen over 5 years ago
Labels: enhancement, Due: Sep, Priority: High, Type: Documentation

#103 - Descriptor merging (from PRC Meeting)

Issue - State: closed - Opened by rishidev over 5 years ago - 1 comment

#87 - Merge doc building code into cloud-schema-builds

Issue - State: closed - Opened by denis-yuen almost 6 years ago - 1 comment
Labels: enhancement

#83 - Provide JSON Schema definitions of the TRS data model

Issue - State: open - Opened by susheel almost 6 years ago - 2 comments
Labels: enhancement, Status: Help Wanted

#79 - Galaxy support

Issue - State: closed - Opened by briandoconnor almost 6 years ago - 3 comments
Labels: Project: TRS

#75 - Review product approval documentation

Issue - State: closed - Opened by denis-yuen almost 6 years ago - 4 comments
Labels: Due: Jun, Priority: Critical, Project: TRS

#27 - Singularity compatibility

Issue - State: closed - Opened by denis-yuen about 7 years ago - 11 comments

#10 - Add a format field per suggestion, workflow launch

Pull Request - State: closed - Opened by denis-yuen almost 9 years ago