fulcrumgenomics/dagr issues and pull requests

#365 - Attempt to make the GATK tasks a) auto-detect GATK version and b) swi…

Pull Request - State: closed - Opened by tfenne about 5 years ago - 4 comments

#365 - Attempt to make the GATK tasks a) auto-detect GATK version and b) swi…

Pull Request - State: closed - Opened by tfenne about 5 years ago - 4 comments

#365 - Attempt to make the GATK tasks a) auto-detect GATK version and b) swi…

Pull Request - State: closed - Opened by tfenne about 5 years ago - 4 comments

#365 - Attempt to make the GATK tasks a) auto-detect GATK version and b) swi…

Pull Request - State: closed - Opened by tfenne about 5 years ago - 4 comments

#364 - Added deletion of CSI indices in DeleteBam.

Pull Request - State: closed - Opened by tfenne about 5 years ago - 1 comment

#364 - Added deletion of CSI indices in DeleteBam.

Pull Request - State: closed - Opened by tfenne about 5 years ago - 1 comment

#364 - Added deletion of CSI indices in DeleteBam.

Pull Request - State: closed - Opened by tfenne about 5 years ago - 1 comment

#364 - Added deletion of CSI indices in DeleteBam.

Pull Request - State: closed - Opened by tfenne about 5 years ago - 1 comment

#364 - Added deletion of CSI indices in DeleteBam.

Pull Request - State: closed - Opened by tfenne about 5 years ago - 1 comment

#363 - Improve performance of flatMap in ScatterGather

Issue - State: open - Opened by nh13 about 5 years ago
Labels: enhancement

#363 - Improve performance of flatMap in ScatterGather

Issue - State: open - Opened by nh13 about 5 years ago
Labels: enhancement

#363 - Improve performance of flatMap in ScatterGather

Issue - State: open - Opened by nh13 about 5 years ago
Labels: enhancement

#363 - Improve performance of flatMap in ScatterGather

Issue - State: open - Opened by nh13 about 5 years ago
Labels: enhancement

#363 - Improve performance of flatMap in ScatterGather

Issue - State: open - Opened by nh13 about 5 years ago
Labels: enhancement

#362 - Add Scatter.empty

Pull Request - State: closed - Opened by nh13 about 5 years ago - 2 comments

#362 - Add Scatter.empty

Pull Request - State: closed - Opened by nh13 about 5 years ago - 2 comments

#362 - Add Scatter.empty

Pull Request - State: closed - Opened by nh13 about 5 years ago - 2 comments

#362 - Add Scatter.empty

Pull Request - State: closed - Opened by nh13 about 5 years ago - 2 comments

#362 - Add Scatter.empty

Pull Request - State: closed - Opened by nh13 about 5 years ago - 2 comments

#362 - Add Scatter.empty

Pull Request - State: closed - Opened by nh13 about 5 years ago - 2 comments

#361 - Add a test for ScatterGather showing failed deferred access with map

Pull Request - State: open - Opened by nh13 about 5 years ago
Labels: bug

#361 - Add a test for ScatterGather showing failed deferred access with map

Pull Request - State: open - Opened by nh13 about 5 years ago
Labels: bug

#360 - Add support for empty tasks

Pull Request - State: closed - Opened by nh13 about 5 years ago - 2 comments

#360 - Add support for empty tasks

Pull Request - State: closed - Opened by nh13 about 5 years ago - 2 comments

#360 - Add support for empty tasks

Pull Request - State: closed - Opened by nh13 about 5 years ago - 2 comments

#359 - Build a Scatter from a method that returns a sequence of results.

Pull Request - State: closed - Opened by nh13 about 5 years ago - 3 comments

#359 - Build a Scatter from a method that returns a sequence of results.

Pull Request - State: closed - Opened by nh13 about 5 years ago - 3 comments

#359 - Build a Scatter from a method that returns a sequence of results.

Pull Request - State: closed - Opened by nh13 about 5 years ago - 3 comments

#359 - Build a Scatter from a method that returns a sequence of results.

Pull Request - State: closed - Opened by nh13 about 5 years ago - 3 comments

#359 - Build a Scatter from a method that returns a sequence of results.

Pull Request - State: closed - Opened by nh13 about 5 years ago - 3 comments

#359 - Build a Scatter from a method that returns a sequence of results.

Pull Request - State: closed - Opened by nh13 about 5 years ago - 3 comments

#359 - Build a Scatter from a method that returns a sequence of results.

Pull Request - State: closed - Opened by nh13 about 5 years ago - 3 comments

#359 - Build a Scatter from a method that returns a sequence of results.

Pull Request - State: closed - Opened by nh13 about 5 years ago - 3 comments

#358 - Scatter gather flatMap/groupBy fixup

Pull Request - State: closed - Opened by nh13 about 5 years ago - 1 comment

#358 - Scatter gather flatMap/groupBy fixup

Pull Request - State: closed - Opened by nh13 about 5 years ago - 1 comment

#358 - Scatter gather flatMap/groupBy fixup

Pull Request - State: closed - Opened by nh13 about 5 years ago - 1 comment

#357 - Add Picard's BaitDesigner and ExtractSequences tasks

Pull Request - State: closed - Opened by mjhipp about 5 years ago - 3 comments

#357 - Add Picard's BaitDesigner and ExtractSequences tasks

Pull Request - State: closed - Opened by mjhipp about 5 years ago - 3 comments

#357 - Add Picard's BaitDesigner and ExtractSequences tasks

Pull Request - State: closed - Opened by mjhipp about 5 years ago - 3 comments

#357 - Add Picard's BaitDesigner and ExtractSequences tasks

Pull Request - State: closed - Opened by mjhipp about 5 years ago - 3 comments

#357 - Add Picard's BaitDesigner and ExtractSequences tasks

Pull Request - State: closed - Opened by mjhipp about 5 years ago - 3 comments

#357 - Add Picard's BaitDesigner and ExtractSequences tasks

Pull Request - State: closed - Opened by mjhipp about 5 years ago - 3 comments

#357 - Add Picard's BaitDesigner and ExtractSequences tasks

Pull Request - State: closed - Opened by mjhipp about 5 years ago - 3 comments

#357 - Add Picard's BaitDesigner and ExtractSequences tasks

Pull Request - State: closed - Opened by mjhipp about 5 years ago - 3 comments

#357 - Add Picard's BaitDesigner and ExtractSequences tasks

Pull Request - State: closed - Opened by mjhipp about 5 years ago - 3 comments

#356 - Move cross-building to 2.12 and 2.13

Pull Request - State: closed - Opened by tfenne about 5 years ago - 1 comment

#356 - Move cross-building to 2.12 and 2.13

Pull Request - State: closed - Opened by tfenne about 5 years ago - 1 comment

#356 - Move cross-building to 2.12 and 2.13

Pull Request - State: closed - Opened by tfenne about 5 years ago - 1 comment

#356 - Move cross-building to 2.12 and 2.13

Pull Request - State: closed - Opened by tfenne about 5 years ago - 1 comment

#356 - Move cross-building to 2.12 and 2.13

Pull Request - State: closed - Opened by tfenne about 5 years ago - 1 comment

#356 - Move cross-building to 2.12 and 2.13

Pull Request - State: closed - Opened by tfenne about 5 years ago - 1 comment

#355 - Empty tasks

Issue - State: open - Opened by nh13 about 5 years ago - 5 comments
Labels: enhancement

#355 - Empty tasks

Issue - State: open - Opened by nh13 about 5 years ago - 5 comments
Labels: enhancement

#355 - Empty tasks

Issue - State: open - Opened by nh13 about 5 years ago - 5 comments
Labels: enhancement

#355 - Empty tasks

Issue - State: open - Opened by nh13 about 5 years ago - 5 comments
Labels: enhancement

#355 - Empty tasks

Issue - State: open - Opened by nh13 about 5 years ago - 5 comments
Labels: enhancement

#355 - Empty tasks

Issue - State: open - Opened by nh13 about 5 years ago - 5 comments
Labels: enhancement

#355 - Empty tasks

Issue - State: open - Opened by nh13 about 5 years ago - 5 comments
Labels: enhancement

#354 - New Tasks

Issue - State: open - Opened by averagehat about 5 years ago - 1 comment

#354 - New Tasks

Issue - State: open - Opened by averagehat about 5 years ago - 1 comment

#354 - New Tasks

Issue - State: open - Opened by averagehat about 5 years ago - 1 comment

#354 - New Tasks

Issue - State: open - Opened by averagehat about 5 years ago - 1 comment

#354 - New Tasks

Issue - State: open - Opened by averagehat about 5 years ago - 1 comment

#354 - New Tasks

Issue - State: open - Opened by averagehat about 5 years ago - 1 comment

#354 - New Tasks

Issue - State: open - Opened by averagehat about 5 years ago - 1 comment

#353 - Add new options to CallDuplexConsensusReads

Pull Request - State: closed - Opened by nh13 about 5 years ago - 1 comment
Labels: enhancement

#353 - Add new options to CallDuplexConsensusReads

Pull Request - State: closed - Opened by nh13 about 5 years ago - 1 comment
Labels: enhancement

#352 - Adding Scatter/Gather methods flatten and flatMap, Gather method scatter, and some bug fixes

Pull Request - State: closed - Opened by nh13 over 5 years ago - 2 comments

#352 - Adding Scatter/Gather methods flatten and flatMap, Gather method scatter, and some bug fixes

Pull Request - State: closed - Opened by nh13 over 5 years ago - 2 comments

#352 - Adding Scatter/Gather methods flatten and flatMap, Gather method scatter, and some bug fixes

Pull Request - State: closed - Opened by nh13 over 5 years ago - 2 comments

#352 - Adding Scatter/Gather methods flatten and flatMap, Gather method scatter, and some bug fixes

Pull Request - State: closed - Opened by nh13 over 5 years ago - 2 comments

#352 - Adding Scatter/Gather methods flatten and flatMap, Gather method scatter, and some bug fixes

Pull Request - State: closed - Opened by nh13 over 5 years ago - 2 comments

#352 - Adding Scatter/Gather methods flatten and flatMap, Gather method scatter, and some bug fixes

Pull Request - State: closed - Opened by nh13 over 5 years ago - 2 comments

#352 - Adding Scatter/Gather methods flatten and flatMap, Gather method scatter, and some bug fixes

Pull Request - State: closed - Opened by nh13 over 5 years ago - 2 comments

#351 - Implement helper method PicardTask.withValidationStringency()

Pull Request - State: closed - Opened by clintval over 5 years ago - 1 comment

#351 - Implement helper method PicardTask.withValidationStringency()

Pull Request - State: closed - Opened by clintval over 5 years ago - 1 comment

#351 - Implement helper method PicardTask.withValidationStringency()

Pull Request - State: closed - Opened by clintval over 5 years ago - 1 comment

#350 - Add a global configuration option to control when to fall back to system

Pull Request - State: open - Opened by nh13 over 5 years ago

#350 - Add a global configuration option to control when to fall back to system

Pull Request - State: open - Opened by nh13 over 5 years ago

#350 - Add a global configuration option to control when to fall back to system

Pull Request - State: open - Opened by nh13 over 5 years ago

#350 - Add a global configuration option to control when to fall back to system

Pull Request - State: open - Opened by nh13 over 5 years ago

#350 - Add a global configuration option to control when to fall back to system

Pull Request - State: open - Opened by nh13 over 5 years ago

#349 - Move to mill

Issue - State: open - Opened by nh13 over 5 years ago

#349 - Move to mill

Issue - State: open - Opened by nh13 over 5 years ago

#349 - Move to mill

Issue - State: open - Opened by nh13 over 5 years ago

#349 - Move to mill

Issue - State: open - Opened by nh13 over 5 years ago

#349 - Move to mill

Issue - State: open - Opened by nh13 over 5 years ago

#349 - Move to mill

Issue - State: open - Opened by nh13 over 5 years ago

#349 - Move to mill

Issue - State: open - Opened by nh13 over 5 years ago

#348 - Optionally check configureExecutable config value path actually exists

Pull Request - State: closed - Opened by clintval over 5 years ago - 7 comments

#348 - Optionally check configureExecutable config value path actually exists

Pull Request - State: closed - Opened by clintval over 5 years ago - 7 comments

#348 - Optionally check configureExecutable config value path actually exists

Pull Request - State: closed - Opened by clintval over 5 years ago - 7 comments

#348 - Optionally check configureExecutable config value path actually exists

Pull Request - State: closed - Opened by clintval over 5 years ago - 7 comments

#348 - Optionally check configureExecutable config value path actually exists

Pull Request - State: closed - Opened by clintval over 5 years ago - 7 comments

#347 - Allow building a Core resource from String

Pull Request - State: closed - Opened by clintval over 5 years ago - 2 comments

#347 - Allow building a Core resource from String

Pull Request - State: closed - Opened by clintval over 5 years ago - 2 comments

#347 - Allow building a Core resource from String

Pull Request - State: closed - Opened by clintval over 5 years ago - 2 comments

#347 - Allow building a Core resource from String

Pull Request - State: closed - Opened by clintval over 5 years ago - 2 comments

#347 - Allow building a Core resource from String

Pull Request - State: closed - Opened by clintval over 5 years ago - 2 comments

#347 - Allow building a Core resource from String

Pull Request - State: closed - Opened by clintval over 5 years ago - 2 comments

GitHub / fulcrumgenomics/dagr issues and pull requests