Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / fulcrumgenomics/dagr issues and pull requests

#404 - Fix bug in SortBam sort order option

Pull Request - State: open - Opened by mjhipp over 2 years ago - 1 comment

#404 - Fix bug in SortBam sort order option

Pull Request - State: open - Opened by mjhipp over 2 years ago - 1 comment

#403 - Add new options to ClipBam and CallDuplexConsensusReads

Pull Request - State: open - Opened by mjhipp over 2 years ago - 1 comment

#403 - Add new options to ClipBam and CallDuplexConsensusReads

Pull Request - State: open - Opened by mjhipp over 2 years ago - 1 comment

#402 - Updated build and dependencies:

Pull Request - State: closed - Opened by tfenne over 2 years ago - 2 comments

#400 - Remove the codacy badge

Pull Request - State: closed - Opened by nh13 over 2 years ago - 1 comment

#400 - Remove the codacy badge

Pull Request - State: closed - Opened by nh13 over 2 years ago - 1 comment

#399 - Bump com.fulcrumgenomics.commons version to 1.2.0

Pull Request - State: closed - Opened by mjhipp almost 3 years ago - 3 comments

#399 - Bump com.fulcrumgenomics.commons version to 1.2.0

Pull Request - State: closed - Opened by mjhipp almost 3 years ago - 3 comments

#398 - Allow callers of Var2VcfValid to turn on printing of a variant's END tag

Pull Request - State: closed - Opened by clintval about 3 years ago - 2 comments

#398 - Allow callers of Var2VcfValid to turn on printing of a variant's END tag

Pull Request - State: closed - Opened by clintval about 3 years ago - 2 comments

#397 - Expose sort option in picard FastqToSam task

Pull Request - State: closed - Opened by mjhipp about 3 years ago - 1 comment

#397 - Expose sort option in picard FastqToSam task

Pull Request - State: closed - Opened by mjhipp about 3 years ago - 1 comment

#397 - Expose sort option in picard FastqToSam task

Pull Request - State: closed - Opened by mjhipp about 3 years ago - 1 comment

#397 - Expose sort option in picard FastqToSam task

Pull Request - State: closed - Opened by mjhipp about 3 years ago - 1 comment

#397 - Expose sort option in picard FastqToSam task

Pull Request - State: closed - Opened by mjhipp about 3 years ago - 1 comment

#396 - Update unittests.yaml

Pull Request - State: closed - Opened by nh13 about 3 years ago - 1 comment

#396 - Update unittests.yaml

Pull Request - State: closed - Opened by nh13 about 3 years ago - 1 comment

#396 - Update unittests.yaml

Pull Request - State: closed - Opened by nh13 about 3 years ago - 1 comment

#396 - Update unittests.yaml

Pull Request - State: closed - Opened by nh13 about 3 years ago - 1 comment

#396 - Update unittests.yaml

Pull Request - State: closed - Opened by nh13 about 3 years ago - 1 comment

#396 - Update unittests.yaml

Pull Request - State: closed - Opened by nh13 about 3 years ago - 1 comment

#395 - Change CI from travis-ci to github actions

Pull Request - State: closed - Opened by nh13 about 3 years ago

#395 - Change CI from travis-ci to github actions

Pull Request - State: closed - Opened by nh13 about 3 years ago

#395 - Change CI from travis-ci to github actions

Pull Request - State: closed - Opened by nh13 about 3 years ago

#395 - Change CI from travis-ci to github actions

Pull Request - State: closed - Opened by nh13 about 3 years ago

#395 - Change CI from travis-ci to github actions

Pull Request - State: closed - Opened by nh13 about 3 years ago

#394 - Update output file option in BwaMem task args

Pull Request - State: closed - Opened by mjhipp about 3 years ago

#394 - Update output file option in BwaMem task args

Pull Request - State: closed - Opened by mjhipp about 3 years ago

#394 - Update output file option in BwaMem task args

Pull Request - State: closed - Opened by mjhipp about 3 years ago

#394 - Update output file option in BwaMem task args

Pull Request - State: closed - Opened by mjhipp about 3 years ago

#394 - Update output file option in BwaMem task args

Pull Request - State: closed - Opened by mjhipp about 3 years ago

#393 - Update travis badge

Pull Request - State: closed - Opened by jacarey over 3 years ago

#393 - Update travis badge

Pull Request - State: closed - Opened by jacarey over 3 years ago

#393 - Update travis badge

Pull Request - State: closed - Opened by jacarey over 3 years ago

#393 - Update travis badge

Pull Request - State: closed - Opened by jacarey over 3 years ago

#393 - Update travis badge

Pull Request - State: closed - Opened by jacarey over 3 years ago

#392 - Jc allow memory override eib

Pull Request - State: closed - Opened by jacarey over 3 years ago

#392 - Jc allow memory override eib

Pull Request - State: closed - Opened by jacarey over 3 years ago

#392 - Jc allow memory override eib

Pull Request - State: closed - Opened by jacarey over 3 years ago

#392 - Jc allow memory override eib

Pull Request - State: closed - Opened by jacarey over 3 years ago

#392 - Jc allow memory override eib

Pull Request - State: closed - Opened by jacarey over 3 years ago

#392 - Jc allow memory override eib

Pull Request - State: closed - Opened by jacarey over 3 years ago

#391 - update travis secure vars

Pull Request - State: closed - Opened by nh13 over 3 years ago

#391 - update travis secure vars

Pull Request - State: closed - Opened by nh13 over 3 years ago

#391 - update travis secure vars

Pull Request - State: closed - Opened by nh13 over 3 years ago

#390 - Update travis to use bionic distribution, openjdk8

Pull Request - State: closed - Opened by mjhipp over 3 years ago

#390 - Update travis to use bionic distribution, openjdk8

Pull Request - State: closed - Opened by mjhipp over 3 years ago

#389 - Expose sorting option in IlluminaBasecallsToSam

Pull Request - State: closed - Opened by mjhipp over 3 years ago - 1 comment

#389 - Expose sorting option in IlluminaBasecallsToSam

Pull Request - State: closed - Opened by mjhipp over 3 years ago - 1 comment

#389 - Expose sorting option in IlluminaBasecallsToSam

Pull Request - State: closed - Opened by mjhipp over 3 years ago - 1 comment

#389 - Expose sorting option in IlluminaBasecallsToSam

Pull Request - State: closed - Opened by mjhipp over 3 years ago - 1 comment

#389 - Expose sorting option in IlluminaBasecallsToSam

Pull Request - State: closed - Opened by mjhipp over 3 years ago - 1 comment

#389 - Expose sorting option in IlluminaBasecallsToSam

Pull Request - State: closed - Opened by mjhipp over 3 years ago - 1 comment

#388 - Add two new GroupReadsByUmi task options

Pull Request - State: closed - Opened by mjhipp over 3 years ago - 1 comment

#388 - Add two new GroupReadsByUmi task options

Pull Request - State: closed - Opened by mjhipp over 3 years ago - 1 comment

#388 - Add two new GroupReadsByUmi task options

Pull Request - State: closed - Opened by mjhipp over 3 years ago - 1 comment

#388 - Add two new GroupReadsByUmi task options

Pull Request - State: closed - Opened by mjhipp over 3 years ago - 1 comment

#387 - Expose -5 option for BwaMem task

Pull Request - State: closed - Opened by mjhipp over 3 years ago

#387 - Expose -5 option for BwaMem task

Pull Request - State: closed - Opened by mjhipp over 3 years ago

#387 - Expose -5 option for BwaMem task

Pull Request - State: closed - Opened by mjhipp over 3 years ago

#387 - Expose -5 option for BwaMem task

Pull Request - State: closed - Opened by mjhipp over 3 years ago

#387 - Expose -5 option for BwaMem task

Pull Request - State: closed - Opened by mjhipp over 3 years ago

#387 - Expose -5 option for BwaMem task

Pull Request - State: closed - Opened by mjhipp over 3 years ago

#386 - Round cores in log statements to 2 decimals of precision

Pull Request - State: closed - Opened by clintval over 3 years ago

#386 - Round cores in log statements to 2 decimals of precision

Pull Request - State: closed - Opened by clintval over 3 years ago

#386 - Round cores in log statements to 2 decimals of precision

Pull Request - State: closed - Opened by clintval over 3 years ago

#386 - Round cores in log statements to 2 decimals of precision

Pull Request - State: closed - Opened by clintval over 3 years ago

#385 - Always use the logical processor count for system max cores

Pull Request - State: closed - Opened by clintval over 3 years ago - 2 comments

#385 - Always use the logical processor count for system max cores

Pull Request - State: closed - Opened by clintval over 3 years ago - 2 comments

#385 - Always use the logical processor count for system max cores

Pull Request - State: closed - Opened by clintval over 3 years ago - 2 comments

#385 - Always use the logical processor count for system max cores

Pull Request - State: closed - Opened by clintval over 3 years ago - 2 comments

#384 - Yf contaminate and estimate bid

Pull Request - State: open - Opened by yfarjoun almost 4 years ago

#384 - Yf contaminate and estimate bid

Pull Request - State: open - Opened by yfarjoun almost 4 years ago

#383 - dagR back door analysis

Issue - State: closed - Opened by ghost about 4 years ago

#383 - dagR back door analysis

Issue - State: closed - Opened by ghost about 4 years ago

#383 - dagR back door analysis

Issue - State: closed - Opened by ghost about 4 years ago

#383 - dagR back door analysis

Issue - State: closed - Opened by ghost about 4 years ago

#383 - dagR back door analysis

Issue - State: closed - Opened by ghost about 4 years ago

#382 - Back door paths analysis

Issue - State: closed - Opened by ghost about 4 years ago - 7 comments

#382 - Back door paths analysis

Issue - State: closed - Opened by ghost about 4 years ago - 7 comments

#382 - Back door paths analysis

Issue - State: closed - Opened by ghost about 4 years ago - 7 comments

#382 - Back door paths analysis

Issue - State: closed - Opened by ghost about 4 years ago - 7 comments

#382 - Back door paths analysis

Issue - State: closed - Opened by ghost about 4 years ago - 7 comments

#382 - Back door paths analysis

Issue - State: closed - Opened by ghost about 4 years ago - 7 comments

#382 - Back door paths analysis

Issue - State: closed - Opened by ghost about 4 years ago - 7 comments

#381 - Expose `INCLUDE_SECONDARY_ALIGNMENTS` for MergeBamAlignment task.

Pull Request - State: closed - Opened by jacarey about 4 years ago - 1 comment

#381 - Expose `INCLUDE_SECONDARY_ALIGNMENTS` for MergeBamAlignment task.

Pull Request - State: closed - Opened by jacarey about 4 years ago - 1 comment

#381 - Expose `INCLUDE_SECONDARY_ALIGNMENTS` for MergeBamAlignment task.

Pull Request - State: closed - Opened by jacarey about 4 years ago - 1 comment

#381 - Expose `INCLUDE_SECONDARY_ALIGNMENTS` for MergeBamAlignment task.

Pull Request - State: closed - Opened by jacarey about 4 years ago - 1 comment

#381 - Expose `INCLUDE_SECONDARY_ALIGNMENTS` for MergeBamAlignment task.

Pull Request - State: closed - Opened by jacarey about 4 years ago - 1 comment

#381 - Expose `INCLUDE_SECONDARY_ALIGNMENTS` for MergeBamAlignment task.

Pull Request - State: closed - Opened by jacarey about 4 years ago - 1 comment

#381 - Expose `INCLUDE_SECONDARY_ALIGNMENTS` for MergeBamAlignment task.

Pull Request - State: closed - Opened by jacarey about 4 years ago - 1 comment

#380 - Add flag to allow for the output of all alignments in bwa mem.

Pull Request - State: closed - Opened by jacarey about 4 years ago - 1 comment

#380 - Add flag to allow for the output of all alignments in bwa mem.

Pull Request - State: closed - Opened by jacarey about 4 years ago - 1 comment

#380 - Add flag to allow for the output of all alignments in bwa mem.

Pull Request - State: closed - Opened by jacarey about 4 years ago - 1 comment